Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1985 ATGGCTGATACTCATCATGCTGATAAGCTCATGGAATCTGATGACATGTTTGGATTTATCGTCATGGATGGTGAAGGCACTCTATTTGGGACCTTGAGTGGTAATACAAGACAGGTGCTTTACATGTATCGTTTGTTTCCTCCAAAGAAACATGGAAGAGGAGGGGAGCCAGCACTACGGTTTTCCCGTGCTCACTTCTTAAAGCATATTAACCATGGGAGGAAGACTGATGAGCTTGCAAGCATGCTTTATATCGATCCTAATACCCGACAGCCTAATGTTTGTGGATTAATACTTGCTGGTTCTGTTGAATACAAAACTAGACAGTTAGTTGATATAATTGATCCCCTTCTTAAGGAAAAAATAGTTAATGTTGTCGATGTATCTTATGGAGAGGAGAATGGATTAAATCAGGCCATTGAATTATCTTCTGGAATTCTGTCCAAACCAAAGTTTGCTAAGGAGTAG 468 0.3996 MADTHHADKLMESDDMFGFIVMDGEGTLFGTLSGNTRQVLYMYRLFPPKKHGRGGEPALRFSRAHFLKHINHGRKTDELASMLYIDPNTRQPNVCGLILAGSVEYKTRQLVDIIDPLLKEKIVNVVDVSYGEENGLNQAIELSSGILSKPKFAKE* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1985 155 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 5 154 IPR004403 GO:0003747|GO:0006415
Mtr6g1985 155 Gene3D eRF1 domain 2 14 149 IPR042226 -
Mtr6g1985 155 SUPERFAMILY Translational machinery components 14 147 - -
Mtr6g1985 155 PANTHER EUKARYOTIC RELEASE FACTOR 1-3-RELATED 5 154 - -
Mtr6g1985 155 Pfam eRF1 domain 2 17 147 IPR005141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1985 Mtr-Chr6 36238263 36238730 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1985 4 155 Eukaryotic Initiation Factors Gene Family AT1G12920 62.092 2.72e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1985 K03265 - sind:105177498 185.652