Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1977 ATGAAAGTCTTGACATTGGACAAGTGTGAATATTTAACCCATATACCTGATGTCTCAGGTCTTCAAAATTTGGAAAAGTTCTCGTTTGCATATTGTCGTAAATTAATTACAATTCACAATTCAATTGGACACCTAAATAAACTTGAAAGGTTAAGTGCATATGGTTGCAGCAAGCTCGAACGTTTTCCACCTTTAGGGTTGGCATCTCTTAACGAATTGGATCTCTCTTTTTGTGAGAGTCTCAAGAATTTTCCAAAATTATTATGCAAGATGACAAATATCAAAGAGATTGGTATATCTTATACTTCCATAGGAGAATTGCCATCTTCATTTCAAAATCTCAATGAACTTGATGAGTTATCAGTAGTGGAATGTGGAATGATGAGGTTCCCAAAACAGAATGATCAAATGTATTCTATAGTGTTTTCAAATTTGAGAAAGCTTAGTCTCAGCGACTGCAACCTCTCAGATGAATGTCTCCCAATATTTCTCAAGTGGTGTGTTAATGTGAAATTGCTAGACTTATCATGGAACAATTTCAAATTTATTCCTGAGTGCCTTAGTGAATGTTACCTTCTTAATAACCTTAGATTGGATAACTGCAAGTCTCTCGAGGAAATTAGAGGGATTCCACCAAATCTTGAAAGGCTTTCTGCAATGGGATGCAAATCATTGAGTTCCTCAAGTAGAAGAATGCTATTGAGTCAGAAGCTACATGAGGCTGGATGCAATATTCGTTTCCCAAACTTCAGTGATGGGATTCCAGATTGGTTCGAGCACCAAAGCAGGGGAGACACAATTTCCTTCTGGTTTTGTAAAAAGATCCCTTCTATTATTTCTATTATTCTTTTTCCGGGATGTACATGTATTCCAGAAGCCGATTTATTTGTCAATGGCTATAAATGTTTTCTTTCTGGTTCTTCATTTTGTGGTTTTAGTTTAGTTGACATTTTGGAGTCGGAACATTCATTTTTGTTTGATGTGAAATTGGAAGAACAGATTAAACATTTGAATCTCATTTCTGAAATGGACAAAGCACTTTTAAAAAATGAGTGGATCCATGTGGAGCTTAATTTTGTAAAGAATGTTTGGAATAAATCGATCTGTGTGACTGAAAAATTAAGCAGTGCGCAAATGGGAATCCACGTGAGGAAGGAGAAAAGCAACGCAGAGGAGAATGTGATATTCACCGATCCTCATAGAGGATATAGAAATACTTCATTATCACAATTTGAGCCTCCTCTGAAAAAGCAAAGATTGGTGGAAGTGGTAGTTTCAGAGACAGAAATTTGGCAGCAGCAACATCTAGCATTATTGTCACTGCAACAACAAATGGCTTTATTACCACAGCAACAACGTATAACTGTTTTGTCAGGCATGTGGAACTTGGTGCTTAGTGAAACAAAGCAAAGCACTTCTAAGAAAAAGCATGCGGAAGTGGGAGTTTCGGAGACAGAAATTTTGCAGCAACAACATCTAGCTTTAGTGTCAGGCATGCAAAACTTGGTGCTTACTGAAACAAATGAGGAACATCTTTGCTAG 1542 0.3684 MKVLTLDKCEYLTHIPDVSGLQNLEKFSFAYCRKLITIHNSIGHLNKLERLSAYGCSKLERFPPLGLASLNELDLSFCESLKNFPKLLCKMTNIKEIGISYTSIGELPSSFQNLNELDELSVVECGMMRFPKQNDQMYSIVFSNLRKLSLSDCNLSDECLPIFLKWCVNVKLLDLSWNNFKFIPECLSECYLLNNLRLDNCKSLEEIRGIPPNLERLSAMGCKSLSSSSRRMLLSQKLHEAGCNIRFPNFSDGIPDWFEHQSRGDTISFWFCKKIPSIISIILFPGCTCIPEADLFVNGYKCFLSGSSFCGFSLVDILESEHSFLFDVKLEEQIKHLNLISEMDKALLKNEWIHVELNFVKNVWNKSICVTEKLSSAQMGIHVRKEKSNAEENVIFTDPHRGYRNTSLSQFEPPLKKQRLVEVVVSETEIWQQQHLALLSLQQQMALLPQQQRITVLSGMWNLVLSETKQSTSKKKHAEVGVSETEILQQQHLALVSGMQNLVLTETNEEHLC* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1977 513 Gene3D Ribonuclease Inhibitor 141 280 IPR032675 -
Mtr6g1977 513 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 360 IPR044974 GO:0006952
Mtr6g1977 513 Gene3D Ribonuclease Inhibitor 1 66 IPR032675 -
Mtr6g1977 513 SUPERFAMILY L domain-like 3 259 - -
Mtr6g1977 513 Gene3D Ribonuclease Inhibitor 67 140 IPR032675 -
Mtr6g1977 513 PANTHER ARCHAEAL ATPASE 10 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1977 Mtr-Chr6 36138188 36141267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1977 1 196 WRKY Transcription Factor Family AT4G12020 34.343 4.83e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1977 - - mtr:MTR_4g051682 477.633