Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1964 ATGGCTCTTCCTTCTCATACTCAATCATCCATCTCTTCCTCCTCTTCCTTCTCCTATGGATTCACTCATGACGTTTTCCTAAGTTTTAGAGGTAGTGACACACGCTACAGTTTTATTGGAAATCTCCACAAAGATCTTTGTAGGAAGGGAATTCGCACCTTCATTGATGACAGAGAGCTTAAAGGAGGTGACGAAATAACACCATCACTTTTCAAGCACATTGAAGAGACTAGGATTTTCATTCCTGTCTTATCTACCAATTATGCTTCTTCTTCATTTTGCTTGGACGAACTTGTCCACATCATTCACTGCTTCAAGGAAAGTAGCCGTCTAGTTTTGCCGATTTTTTATGATGTGGAACCTTCTCATGTGCGACATCAACATGGAAGTTATGCTAAAGCACTGGATGATCATATAGAGAAGTTCCAAAATAACAAGAATAACATGGAGAGGTTGCAGAAATGGAAGAGTGCTCTTACTCAAACTGCTAACTTCTCTGGCCACCATTTCAATCCTAGGAATGGATATGAATATGAGTTTATTGAGAAGATAGTCAAATACGTATCCAGCAAGATCAATCGTGTTCCTTTATATGTTGCCGATTACCCCGTTGGTCTCCAGTCTAGGGTCCTAAAAGTAAATTCATTTCTGGATCTCAGATCTAATGGTGAAGTTCAGATGCTAGGGATCTATGGGACTGGAGGGATGGGAAAGACAACACTTGCCAGAGCAGTTTATAATTCCATAGCCGATCAATTTGATGGTTTGTGTTTTCTTCACAATGTAAGGGAAAATTCAGCTAAATATGGTTTAGAGCATCTACAGGAAAAGCTCCTTTCCAAATTAGTTGAATTGGACGTTAAGTTAGGAGATGTCAACGAGGGAATTCCAATCATAAAGCAAAGGCTTCACCGAAAGAAGGTTTTGTTGATTCTAGATGATGTTCATGAACTGAAGCAATTGCAAGTTTTGGCTGGACGACTTGATTGGTTTGGTCTTGGAAGTAAAGTGATCATTACCACTCAAGAAAAAAAATTGCTAGATGGTCATGGGATTGAAAGAGCATATGAAATACATAAGTTAAATGACAAAGAAGCTCTTGAATTGTTGAGATGGAATGCTTTCAAAAATAACAAAGTCGATACAAATTTTGACGACATTTTACACCAGGCTGTAACTTATGCTTCTGGCCTTCCATTGGCTTTAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAATATAAGAGAATGGAAATCTGCATTAAGTCAGTATGAAAGGAGACCCATTAGAAAGATCCAAGAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGATGAGAAAAATGTTTTTCTTGACATCGCTTGCTGCTTCAAAGGATATGAATTGAAAGAACTTGAAAATATACTTCATGCTCATTATGGTAACTGCATGAATTATCAAATCAGAGTGTTGCATGACAAATCTCTCATAAAGATCTACTGGTACCTGGGGAATTATGTTGTGACATTACATGCCTTGATAGAGAAAATGGGTAAAGAAATTGTGCATGAAAAATCTCCAAAAGAGCCAGGAAGACGTAGTAGGTTGTGGTTCCATAAAGACATAATTCATGTCTTAGAAGAAAATAAGGGATCAAGTCAAATTGAAATTATATATTTGGAATTCCCGTTATCTGAGGAAGAGGTGATAGAATGGAAGGGAGATGAGCTCAAGAAGATGCAAAACCTCAAAACACTTATTGTTAAGAATGGTAGCTTTTCCAAAGGTCCTAAATATCTTCCTAACAGTTTGAGAGTATTGGAATGGCCTAAATATCCTTCACGGATCATACCATCTGATTTTTGCCCAAAGAAACTTTCTATATGCAAGCTACAGCAAAGTGACTTTATTTCATTTGGGTTGCATGGCACAATGAAGAGGTTTGTGAATATGAAAGAGTTAAATCTAGACAATTGTCAATTTTTAACACGGATACATGACGTCTCCAACCTCCCAAATTTAGAAATATTTTCATTTCGAAGTTGTGAAAATTTAATTGAGATTCACAAATCTGTTGGGTTCCTAAATAAACTTCAAGTCTTGGATGCTAGAGGTTGCAGCAAGCTTATGAGTTTCCCACCACTGAAGACAACCTCTCTTCAAGAACTGATGCTTTCATATTGTGAGAGTCTCAAGACTTTTCCAGAAATATTAGGAGAGGTGAAGAATATAATTTATATTACATTGACAAACACTTCCATTGAAAAATTGCCAGTTTCATTTCAAAATCTCACTGGGCTTATTCTCTTAGACATAGAAGGAAAAGGAATGCTTAGATTACCTAGTAGCATTTTTAGGATGCCAAATTTGTCAGACATTATTGCTAACGGGTGCATATTGTCCAAACTGGATGATAAATTTAGTTCCATGGTGTTTACATGCCCAAAATATATCAAACTGAAAAAATGCAACTTGTCAGATGATTTTCTTCCAATACTTGTCATGTGGTCTGCTAATGTGAAAATATTAGACCTATCAGGAAATAATTTCACAATTCTTCCAGAATGCATCAAAGATTTTCAGTTTTTATATGCTCTTATATTGGATGATTGCAAGTGCCTTAGAGAAATTAGAGGGATGCCGCCAAATTTAGCATACTTGTCTGCAATAGGCTGCAAATCCTTGACTTCCTCGGCCAGAAACATGCTATTGAATCAGGAACTGCATGAGGCTGGAGGAACCAGGTTTTGTTTGCCAGGATTTGCAAGGATTCCAGAGTGGTTTGATCACCAAAACATGGGACATACAATTTCTTTTTGGTTTCGTAACAACCTCCCTTCCATTGCTCTCTGTTTTTCTAATAAATTAGTTGCTAAAGCCATTATGTATGAGATAATACCCACTTTAATCATCAATGGCAATAATTGTTGTATTCCAGTTCTGAGGAATCAGGTTGGTGGAATGATGCATCATGATACATGTTTGTATGATATGCAGCTGGAATCTTTTTTAGACATGGACAATGAATATTTTTTAGAAAATGACTGGAATCATGCAGAGATTATATGTGAACATCAGTTAGTGGAACCAATAACAGAAATTGGAATCCATTTTTTCAAACAGAAAAATAACATGGATGATATTCAATTCACCAATCCTTATGAAAAGATAAAATCAAATGATAATGATGTCGTTGTTGATGATGATGATGATGTTTTTATTGATGCTGATGATATTCTTCATGATGATGATGATGATGATGTCTTTTATGATGTTGAAAATGTTCTTGATGATGATGATGTTCTTGATGATGAAGACGACCACCATTCACAGTAG 3318 0.3635 MALPSHTQSSISSSSSFSYGFTHDVFLSFRGSDTRYSFIGNLHKDLCRKGIRTFIDDRELKGGDEITPSLFKHIEETRIFIPVLSTNYASSSFCLDELVHIIHCFKESSRLVLPIFYDVEPSHVRHQHGSYAKALDDHIEKFQNNKNNMERLQKWKSALTQTANFSGHHFNPRNGYEYEFIEKIVKYVSSKINRVPLYVADYPVGLQSRVLKVNSFLDLRSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLHNVRENSAKYGLEHLQEKLLSKLVELDVKLGDVNEGIPIIKQRLHRKKVLLILDDVHELKQLQVLAGRLDWFGLGSKVIITTQEKKLLDGHGIERAYEIHKLNDKEALELLRWNAFKNNKVDTNFDDILHQAVTYASGLPLALEVVGSNLFGKNIREWKSALSQYERRPIRKIQEILKVSFDALEEDEKNVFLDIACCFKGYELKELENILHAHYGNCMNYQIRVLHDKSLIKIYWYLGNYVVTLHALIEKMGKEIVHEKSPKEPGRRSRLWFHKDIIHVLEENKGSSQIEIIYLEFPLSEEEVIEWKGDELKKMQNLKTLIVKNGSFSKGPKYLPNSLRVLEWPKYPSRIIPSDFCPKKLSICKLQQSDFISFGLHGTMKRFVNMKELNLDNCQFLTRIHDVSNLPNLEIFSFRSCENLIEIHKSVGFLNKLQVLDARGCSKLMSFPPLKTTSLQELMLSYCESLKTFPEILGEVKNIIYITLTNTSIEKLPVSFQNLTGLILLDIEGKGMLRLPSSIFRMPNLSDIIANGCILSKLDDKFSSMVFTCPKYIKLKKCNLSDDFLPILVMWSANVKILDLSGNNFTILPECIKDFQFLYALILDDCKCLREIRGMPPNLAYLSAIGCKSLTSSARNMLLNQELHEAGGTRFCLPGFARIPEWFDHQNMGHTISFWFRNNLPSIALCFSNKLVAKAIMYEIIPTLIINGNNCCIPVLRNQVGGMMHHDTCLYDMQLESFLDMDNEYFLENDWNHAEIICEHQLVEPITEIGIHFFKQKNNMDDIQFTNPYEKIKSNDNDVVVDDDDDVFIDADDILHDDDDDDVFYDVENVLDDDDVLDDEDDHHSQ* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1964 1105 CDD AAA 230 342 - -
Mtr6g1964 1105 Gene3D - 360 444 IPR042197 -
Mtr6g1964 1105 PANTHER ARCHAEAL ATPASE 33 1017 - -
Mtr6g1964 1105 Pfam TIR domain 23 193 IPR000157 GO:0007165
Mtr6g1964 1105 Gene3D Ribonuclease Inhibitor 713 904 IPR032675 -
Mtr6g1964 1105 Gene3D Ribonuclease Inhibitor 545 712 IPR032675 -
Mtr6g1964 1105 Gene3D - 22 190 IPR035897 -
Mtr6g1964 1105 PRINTS Disease resistance protein signature 227 242 - -
Mtr6g1964 1105 PRINTS Disease resistance protein signature 302 316 - -
Mtr6g1964 1105 PRINTS Disease resistance protein signature 395 409 - -
Mtr6g1964 1105 PRINTS Disease resistance protein signature 687 703 - -
Mtr6g1964 1105 ProSiteProfiles TIR domain profile. 21 192 IPR000157 GO:0007165
Mtr6g1964 1105 SUPERFAMILY L domain-like 556 913 - -
Mtr6g1964 1105 Coils Coil 132 152 - -
Mtr6g1964 1105 Pfam NB-ARC domain 213 441 IPR002182 GO:0043531
Mtr6g1964 1105 Gene3D - 191 352 IPR027417 -
Mtr6g1964 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 454 IPR027417 -
Mtr6g1964 1105 SMART AAA_5 224 366 IPR003593 -
Mtr6g1964 1105 SMART till_3 22 165 IPR000157 GO:0007165
Mtr6g1964 1105 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 167 IPR035897 -
Mtr6g1964 1105 SUPERFAMILY "Winged helix" DNA-binding domain 431 541 IPR036390 -
Mtr6g1964 1105 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 1017 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1964 Mtr-Chr6 35852428 35864608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1964 17 821 WRKY Transcription Factor Family AT4G12020 28.333 2.75e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1964 - - mtr:MTR_6g075690 1565.05