Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1958 ATGGACCTGGAGGAATATATGTTATGTGCTCATTATGGTCAATGCATGAAATATCATATTGGAGTGTTGGTTAAAAAATCTCTTCTAAAAATTTGTCCTCGGGGTTATGTAACATTACATGACTTGATAGAAGACATGGGTAAAGAAATTGTACGACAAGAATCACCAAAAGAGCCTGGGAAGCGCAACAGGTTGTGGTTCTATGAAGATATATTTCAAGTTTTAGAAGGAAATTCAGGGACAAGTCAGATTGAAATTATACATTTGGATTTTGCATTACCTGAAGAAATAGTAGAATGGAAAGGAGATGAATTCAAGAAGATGAAAAACCTCAAAACACTTGTTGTTAAAACTAGTTTCTTTTTCAACCCTCATGTACATCTTCCAAATAGTTTAAGAGTATTGGAATGGCATGCATTTCCTTTACATGAAATACAATCTGATTTTCTTCCAAAGAATATTTCCTTATGCAAGTTACCAAACAGTGGCCTTACATCATTTAAGTTGGCTAACTCTTTGAAGGAAAGGGGTTATCATCTGTTGCCAAACCAGAGTGATAAACCAAGTCCCATGGTGTCCACAAATGTACAATCTCTTGTGCATAGAAAATGCAACCGAACAGATGAATCTTTTCCAATAATTCTCAAGTGGTTTGCCAATATGACACACTTAGACTTATTGAAGAGTAATTTCACAATTCTTCCGGAATGTCTTCAAGAAATTAGATGGTTTCCGCCAAATTTAAAATGCTTGTCTGCATTGAATTGTAAATCATCAAGTTCCTCATGTAGAAACATGCTACTGAATCAGGGAACAAGCAGAATTGAAATTATATGTATGGATTACCTGTCATTGGATGTTGGAGACGTAAAAGTAGCATGGAAAGGAGATGCGTTCAAGAAAACAAAAAACCTCAAAACTTTGATCATTAAAAGTGGCTTCTTTCCCAAAGATCCCGGACATCTTCCAAATAATTTGAGATTTCTAGAATGGCATAGATATCCTTCACATGAAGTTTGCTTAAATCATTTGAGTCACCTTCCTCATTGA 1050 0.3514 MDLEEYMLCAHYGQCMKYHIGVLVKKSLLKICPRGYVTLHDLIEDMGKEIVRQESPKEPGKRNRLWFYEDIFQVLEGNSGTSQIEIIHLDFALPEEIVEWKGDEFKKMKNLKTLVVKTSFFFNPHVHLPNSLRVLEWHAFPLHEIQSDFLPKNISLCKLPNSGLTSFKLANSLKERGYHLLPNQSDKPSPMVSTNVQSLVHRKCNRTDESFPIILKWFANMTHLDLLKSNFTILPECLQEIRWFPPNLKCLSALNCKSSSSSCRNMLLNQGTSRIEIICMDYLSLDVGDVKVAWKGDAFKKTKNLKTLIIKSGFFPKDPGHLPNNLRFLEWHRYPSHEVCLNHLSHLPH* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1958 349 Gene3D Ribonuclease Inhibitor 73 349 IPR032675 -
Mtr6g1958 349 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 273 343 IPR044974 GO:0006952
Mtr6g1958 349 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 169 IPR044974 GO:0006952
Mtr6g1958 349 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 194 271 IPR044974 GO:0006952
Mtr6g1958 349 PANTHER ARCHAEAL ATPASE 5 169 - -
Mtr6g1958 349 PANTHER ARCHAEAL ATPASE 194 271 - -
Mtr6g1958 349 PANTHER ARCHAEAL ATPASE 273 343 - -
Mtr6g1958 349 SUPERFAMILY "Winged helix" DNA-binding domain 6 76 IPR036390 -
Mtr6g1958 349 SUPERFAMILY L domain-like 96 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1958 Mtr-Chr6 35665624 35671935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1958 19 162 WRKY Transcription Factor Family AT4G12020 37.342 2.10e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1958 - - mtr:MTR_6g075780 359.762