Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1957 ATGGCTTTGCAACCACCTTCTTCTTCTACTTCTTTCTCCTATGGCTTCACATACGATGTCTTTCTCAGCTTCAGAGGCAGTGACACTCGTTTCGGTTTCACTGGAAATCTCTACAAAGCTCTTCGTGACTGTGGAATCCACACTTTTATTGATGATAGGGAGCTTCAAGGAGGTGACGAAATATCACCGTCACTCGTAAAAGCCATTGAAGAATCTAGGATTTTCATCCCTGTGTTTTCCATCAACTATGCCTCTTCTTCGTTTTGCTTGGACGAACTTGTCCACATCATTGACTGCTTCAACACAAAGGGATGTTTGGTTTTGCCTGTTTTCTATGGTGTGGATCCTTCTCACATTCGACATCAAACCGAATGTTTTGGTGAAGCAATAGCTAAGCAAGAAGTGAAGTTCCAAAATCAAAAGGATGACATGGATAGGTTGCTAAAATGGAAATGTGCTCTTAACAAAGCAGCTAACTTTTCTGGCCACCATTTCAATCTTGGGAATGAATATGAGTATGAGATTATTACAAAGATAGTTAAAGAAGTATCGAACAAGATAAATCGTACTCCTTTACATGTTGCGGATTACCCGGTTGGAATAGAGTCTCGATTGCTACAAATAAAATCACTTCTGGATGTTGGTTCCAATGATGCGGTCTGCTTGGTCGGGATTTATGGGATGGGAGGGTCGGGTAAAACAACACTTGCACAAGCAATTTATAATTTTATTGCCGATCAATTTGAATGTTTGTGTTTTCTTCATAATGTGAGAGAAATTTCAGCTAAACATGGCTTAGAAGATCTCCAAGAAAAACTCCTTTCTAAAACAGTTGGTTTGAGCGTTAAGTTTGGACATGTAAGTGAAGGAATACCAATAATAAAGGAAAGGCTACGACTAAAGAAGGTTCTTTTGATTCTCGATGACGTTGATGAACTAAAACAGTTGAAGGTTTTGGCTGGAGACCCTAATTGGCTTGGTCATGGTAGTCGGGTTGTCGTTACAACTCGAGACAAACATTTGCTAGCATGTCATGGGATTGAGAGAACTTATGAACTAGATGGGTTAAATAAGGAAGAAGCTCTAGAGTTGCTGAAATGGAAGGCATTTAAAAATAATAAAGTTGATTCAAGTTATGAGCACATTTTAAACCGTGCAGTTACTTATGCCTCTGGCCTTCCATTGGCTTTAGAAGTAGTTGGTTCTAGCTTGTTTGGAAAGCATAAAGATGAGTGGAAATCTACATTAGATCGGTATGAAAGGATTCCTCATAAAGAGGTCCTGAAGATACTTAAAGTGAGCTTTGATAGTTTGGAGAAAGATGAGCAAAGTGTTTTTCTCGACATTGCTTGTTGTTTCAGAGGATATATATTAGCAGAGGTTGAAGATATTCTCTATGCTCATTACGGTGAATGCATGAAATATCATATTAGAGTGTTGATCGAGAAATGTCTAATAAAGATTTATAGACAATGTGGTTGTACTTATGTGACATTACATGACTTGATAGAGGAGATGGGTAAAGAAATTGTTCGACAAGAATCACCAAAAGAGCCTGGGAAACGGAGTAGATTATGGTTCCATAAAGACATAGTCCAAGTTTTAGAAGAAAATTTGGGGACCAGTAAAATTGAAATTATATATATGGAATCCCCATTGTCTAAGGAAGAAGAAGTGGTAGAATGGAAAGGAGATGAATTAAAGAAGATGGAAAACCTCAAAACTTTTATTATTAAAAGAGGTCGCTTTTCCAAAGGTCTTGAGCATCTTCCAAATAATTTAAGAGTACTGGAATGGCGTAGTTATCCTTCACAAGATTCACCATCAATTTTTTGGCAGAAGAAACTTTCCATATGCAAGTTACGTGAAAGCTGCTTTACATCATTTGAATTGCATGATTCAATAAAGAAATTTGTGAATATGAGAGAGTTAATTTTAGACCACTGTCAGTGCTTAATAAGAATACATAATGTATCCGGTCTCCCAAATTTAGAAACATTTTCATTTCAATGTTGTAAGAATTTAATTACAGTACACAATTCTGTTGGGTTATTAAATAAACTCAAAATCTTGAATGCTAAGCGTTGCAGCAAGCTCACAAGTTTTCCACCAATGAAGCTCACCTCTCTTCATGAATTGGAGCTTTCTTATTGTACGAGTCTCAAAAGTTTTCCTGAAATATTAGGAGAGATTAAAAATGTAACACGGATTCTTTTGAGGGGCACTTTCATAGAAGAACTCCCATATTCATTTCGAAATCTCTCTGGGCTTCATAGGTTACTAATATGGGGTAGTAGAAATGTTAGGTTACCATTTGGCATTCTAATGATGCCCAATTTGGCACGTATTGAAGCTTATGGATGTCTCTTATTTCAAAAAGACAATGATAAACTATGTTCTACTACGATGTCTTCGTGCGTACAGTTTCTTCGGTGCAAGTTGTCAGTGGAATTTCTTCCGATAGTTCTCAGTCAAATTACTAATGTGAAAGATTTAGTCCTATCAGGGAGTAATTTTACAATCCTTCCGGAATGCCTCAAAGAATGCAACTTTTTACAGAGCCTTGAATTGGATAATTGTAAGTCTCTTCAAGAAATTAGGGGGATTCCGCCAAATTTAAAACATGTGTCTGCATTGCGCTGTGAATCTCTGACTTACTTGTGTAGATGGAAGCTACTGAATCAGGAACTGCATGAGGCTGGAAGCACAGATTTTCGTTGGGCAGGAACAGAAAGGATTCCAGAGTGGTTTGAGCACCAAAGCAAGGGACCATCAATTACTTTCTGGTTTCGTGAAAAGTTCCCTTCCATGGCTATCTTCTTTGCTACTAAATCCATAAATAACAAGCTCCCTGACAGTCACTTTCTTTCGTTAAGAGTCAATGGCGTTGCATGGGCTCTTGATCATCGATGGAACAGAACAAATAAATATCATCCTACTTTAATCGAGGTGAAACCGGACCATACTTATCTACTGGATATGCAATTGCAAGACAAAGAACTCAATTATAATTTGGATGAAGCACTTTCAAAAGATGAATGGATCCGTGTAGAGGTTAGGTGTGATGGCTCGATGATGAAGTCACTCCTTACAAATTGTGGAATTCATGTATTCAAGCAGAAAAGCAGCATGAATGATATTCGATTCACTGATCCTTACAAACTAAATTCCGAAGTTGTTCAAGCTTCTTGGATTTAG 3198 0.3759 MALQPPSSSTSFSYGFTYDVFLSFRGSDTRFGFTGNLYKALRDCGIHTFIDDRELQGGDEISPSLVKAIEESRIFIPVFSINYASSSFCLDELVHIIDCFNTKGCLVLPVFYGVDPSHIRHQTECFGEAIAKQEVKFQNQKDDMDRLLKWKCALNKAANFSGHHFNLGNEYEYEIITKIVKEVSNKINRTPLHVADYPVGIESRLLQIKSLLDVGSNDAVCLVGIYGMGGSGKTTLAQAIYNFIADQFECLCFLHNVREISAKHGLEDLQEKLLSKTVGLSVKFGHVSEGIPIIKERLRLKKVLLILDDVDELKQLKVLAGDPNWLGHGSRVVVTTRDKHLLACHGIERTYELDGLNKEEALELLKWKAFKNNKVDSSYEHILNRAVTYASGLPLALEVVGSSLFGKHKDEWKSTLDRYERIPHKEVLKILKVSFDSLEKDEQSVFLDIACCFRGYILAEVEDILYAHYGECMKYHIRVLIEKCLIKIYRQCGCTYVTLHDLIEEMGKEIVRQESPKEPGKRSRLWFHKDIVQVLEENLGTSKIEIIYMESPLSKEEEVVEWKGDELKKMENLKTFIIKRGRFSKGLEHLPNNLRVLEWRSYPSQDSPSIFWQKKLSICKLRESCFTSFELHDSIKKFVNMRELILDHCQCLIRIHNVSGLPNLETFSFQCCKNLITVHNSVGLLNKLKILNAKRCSKLTSFPPMKLTSLHELELSYCTSLKSFPEILGEIKNVTRILLRGTFIEELPYSFRNLSGLHRLLIWGSRNVRLPFGILMMPNLARIEAYGCLLFQKDNDKLCSTTMSSCVQFLRCKLSVEFLPIVLSQITNVKDLVLSGSNFTILPECLKECNFLQSLELDNCKSLQEIRGIPPNLKHVSALRCESLTYLCRWKLLNQELHEAGSTDFRWAGTERIPEWFEHQSKGPSITFWFREKFPSMAIFFATKSINNKLPDSHFLSLRVNGVAWALDHRWNRTNKYHPTLIEVKPDHTYLLDMQLQDKELNYNLDEALSKDEWIRVEVRCDGSMMKSLLTNCGIHVFKQKSSMNDIRFTDPYKLNSEVVQASWI* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1957 1065 CDD AAA 199 338 - -
Mtr6g1957 1065 Pfam TIR domain 18 191 IPR000157 GO:0007165
Mtr6g1957 1065 Gene3D - 15 183 IPR035897 -
Mtr6g1957 1065 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1021 IPR044974 GO:0006952
Mtr6g1957 1065 PANTHER ARCHAEAL ATPASE 28 1021 - -
Mtr6g1957 1065 SUPERFAMILY L domain-like 512 892 - -
Mtr6g1957 1065 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1957 1065 Gene3D - 355 439 IPR042197 -
Mtr6g1957 1065 Gene3D Ribonuclease Inhibitor 724 900 IPR032675 -
Mtr6g1957 1065 ProSiteProfiles TIR domain profile. 16 187 IPR000157 GO:0007165
Mtr6g1957 1065 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 162 IPR035897 -
Mtr6g1957 1065 Pfam NB-ARC domain 208 430 IPR002182 GO:0043531
Mtr6g1957 1065 PRINTS Disease resistance protein signature 222 237 - -
Mtr6g1957 1065 PRINTS Disease resistance protein signature 297 311 - -
Mtr6g1957 1065 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g1957 1065 PRINTS Disease resistance protein signature 705 721 - -
Mtr6g1957 1065 Gene3D - 184 348 IPR027417 -
Mtr6g1957 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr6g1957 1065 Gene3D Ribonuclease Inhibitor 532 723 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1957 Mtr-Chr6 35655312 35659943 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1957 12 837 WRKY Transcription Factor Family AT4G12020 28.505 1.01e-68 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1957 - - mtr:MTR_6g075690 1181.39