Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1955 ATGGATTTGATATCAACTTCATCTGAGAGTGGACAACTGAGTGTTGAAACTTCATCACTGATTCATGATAGTTCTCAATGTTACTCCCCTAGCAATAAAGAATCATGGAAGTCTTTAGTCTTTCAATCTATTAAAGAGATTGAAGATTTTTATGGTAATTATGCATATAACACTGGATTTTCTATCAGGACTATGTTGAAGTCGAAGAATAATTCACAAAATAAGAAATCAGATAAGGTACATTATGTGCCTTATGTTTGTAACAAACAAGGTTTCAAGAAGGGAAGTTTGCTTAATCCTAACAACAGGCCAACATCAGACAGTCCACTGGTTATTGAGTTTATGAAAGTGAAAGAAAAATATGAGGAAAGGGTTGGTTGTAAAGCTCGAATATCTTTGAAGTTGGATGAAGTTTTGAATGTGTATAAGATTTATAGATGGGATGTGGCTCACTGTCATCCATTACAAAAACCAGAGCATTTGTGTTACCTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTAGCTCTAATAAATTCTAAAGTTGGAATGTCGATGAGAACGTCTTATGAAGTTCTTGGTCAAGGAGTTGGAGGTACGGAGAATCTTCCTTTTCGGTTTTCAGACTTAAAAGAACTATCTAATGACAATTCGTCAAAAGGAGATGAAGACATAGCTAGCATTTTTTGGGCAGATGGAATTATGCAACTGGATTATTCTCTATTTGGTGATGTCATCAGTTTTGATACAACTTATCGAACAAACAATCAATATCGGCCATTAGCTTCCTTTATTGGTTTTGACAATCATCGTAAGAGTGTTTTATTTGGTGCTGCACTATTGTACGATGAGACAACAACTACTTTTGATTGGTTGTTTACAACATTCTTGAAGTGTGTTTTTCATGGGCTTTGTTCATGGCACATGGCAGAGAATGCAAAGAAAAATCTTGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTAGACGATGAATCAGATTTCGACTATAATTGA 1044 0.3506 MDLISTSSESGQLSVETSSLIHDSSQCYSPSNKESWKSLVFQSIKEIEDFYGNYAYNTGFSIRTMLKSKNNSQNKKSDKVHYVPYVCNKQGFKKGSLLNPNNRPTSDSPLVIEFMKVKEKYEERVGCKARISLKLDEVLNVYKIYRWDVAHCHPLQKPEHLCYLRSFREVNEVQGQLALINSKVGMSMRTSYEVLGQGVGGTENLPFRFSDLKELSNDNSSKGDEDIASIFWADGIMQLDYSLFGDVISFDTTYRTNNQYRPLASFIGFDNHRKSVLFGAALLYDETTTTFDWLFTTFLKCVFHGLCSWHMAENAKKNLGSRANSAFFDELTNLVSNVDDESDFDYN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1955 347 PANTHER OS01G0607050 PROTEIN 39 344 - -
Mtr6g1955 347 Pfam FAR1 DNA-binding domain 49 156 IPR004330 -
Mtr6g1955 347 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 344 IPR031052 GO:0006355
Mtr6g1955 347 Pfam MULE transposase domain 247 301 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1955 Mtr-Chr6 35635745 35637376 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g1955 FAR1 7.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1955 - K17604 mtr:MTR_0558s0020 463.766