Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1953 ATGAATCATTTTGACAAAGATGAAATTCCGATACTGTCAGAAACACGTGGACAACGATCTGATGACCCTCAGGACTCTACCTTTCGAAGAAACATATCGAGGACACGGAGTGCTTCAATTTCTATTCCTATGGCTTCTCTAGATCCATACGAGAGACAACCAAATCTTGTCGGACATACTGGTCCGCTTCGTACCACGAGGAAAACTCCTGTTAGCCAAATGAGTGGTCCATTATATGTTTCTCCTGCAACTGGAAATACTTTTCAGAATAATATAATGGTGGCAGGAAACAAAGTAGGGGAGAACAAGACAGAGAAGTTTTCTACATTTGATGGCACGGATAAAAATGAACACTTGTTAAGGTCTGGACAACTAGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAAAGTTGCTCAGCAAAGAAAACCAAGAGCTTCCACTATATTTGATCCCAAGTTCCACAATTCTCTATATGGCGACGCCAAAGGTTATGGAAGGAAATTTTTTTCTTTCTGCAATTCATGTATTCCTGGAGTTATGAACCCTCATGCAAAAGTTGTACAACAATGGAACAAGGTTTTGGCCATATTTTGCTTGGTCGCAATTTTTGTTGATCCGTTATTTTTTTTCTTACTCTATGTGGAGGAGAAAAATAAATGTATTCGAATCAACCACGCAATGGCAACAACACTTGTTGTACTTAGAAGCATAACCGATGTTGTGTATCTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTTGTTGGTGCTGGGGATTTAGTTGACCATCCCAAGAAAATAGCTGTTAATTACTTTAAGAGCTACTTTCTCTTCGACTTATTTGTTGTATCACCTCTTCCTCAGATAATGATACTATTTATCCTACCAACTTCCTTGGGGATATCAGGAGCAAATTATGCCAAGAATCTTCTACGTCTAGGAATCCTTATTCAATATATTCCCAGATTGTTCAGATTTTTGCCTCTGCTAATTGGTCAGTCTCCAACTGGATTCATATTCGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTGATTTTTATGCTATCCGGCCATGTTGTTGGTTCATGCTGGTATCTCTTTGGCCTACAGAGGGTTAACCAATGTTTGCGTGATGCCTGCCATAATGCTAAACTACTTGGATGCATGGAATTGATTGATTGTAATTCTAAATCGTCGAATTTATCAGTTACATGGAGCCAGGATCAGGGCGCCAAAGATTGTTTCAATTCTTCATCTGGTGCTTTTGCTTATGGAATTTATAACGCTGCTGTACTACTTACGATAGAAACTAGGGTGGTCAACAAATATGTGTATGCACTCTTTTGGGGATTTCAGCAAATCAGTACTCTAGCTGGTAATCAAGAACCAAGCTATTTTGTGTGGGAAGTTCTTTTTACAATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGGTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAACCATCGTCGCTTACCAGAAGATCTTAAAAGGAGAGTACGTCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTCCTGAGAAAATGGTTCTGGAAAATTTGCCAGAAGATCTCCAGACAGACATAAGACGCCATCTCTTCAAATTTGTTAATAAAGTTCGAATTTTTGCCCATATGGCTGAGGATGAACCTATCTTAGACGCCATTCGTGAGAGACTAATACAGACGACATACATTAAAGGAAGTAAAATTCTCAGTCAGGGTGGTCTTGTACAGAAAATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCGTCGGAGAGGATGGAATTCCGGTTCCGTTATCAGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAGCAAAGAAGGTAAAAAAATAAAGCTTCACGGCCAGGGTTTGACTAGCGACAGAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTTCGTGCTAAAGACATTGAAGAAGTCACAACTCTCTTCGCAAGATTTTTGCGGAGCCCTCGTGTTCAAGGAGTTATAAGGTATGAATCAACTTACTGGAGATCACTTGCAGCAAATAGAATTCGGGTTGCATGGAGATACAGGAAGAAACGTCTAAGTAAAGCTAATACCACACAAAATGATTATCAAACATTGATGCCATAG 2289 0.4019 MNHFDKDEIPILSETRGQRSDDPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHTGPLRTTRKTPVSQMSGPLYVSPATGNTFQNNIMVAGNKVGENKTEKFSTFDGTDKNEHLLRSGQLGMCNDPYCTTCPTYFKVAQQRKPRASTIFDPKFHNSLYGDAKGYGRKFFSFCNSCIPGVMNPHAKVVQQWNKVLAIFCLVAIFVDPLFFFLLYVEEKNKCIRINHAMATTLVVLRSITDVVYLLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFLFDLFVVSPLPQIMILFILPTSLGISGANYAKNLLRLGILIQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHNAKLLGCMELIDCNSKSSNLSVTWSQDQGAKDCFNSSSGAFAYGIYNAAVLLTIETRVVNKYVYALFWGFQQISTLAGNQEPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMNHRRLPEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVNKVRIFAHMAEDEPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESVGEDGIPVPLSEGDACGEELLRWYLEQSSESKEGKKIKLHGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFARFLRSPRVQGVIRYESTYWRSLAANRIRVAWRYRKKRLSKANTTQNDYQTLMP* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1953 762 MobiDBLite consensus disorder prediction 1 40 - -
Mtr6g1953 762 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 753 - -
Mtr6g1953 762 Pfam Ion transport protein 197 513 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr6g1953 762 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 753 - -
Mtr6g1953 762 CDD CAP_ED 586 704 IPR000595 -
Mtr6g1953 762 Gene3D Jelly Rolls 584 710 IPR014710 -
Mtr6g1953 762 ProSiteProfiles cAMP/cGMP binding motif profile. 596 656 IPR000595 -
Mtr6g1953 762 SUPERFAMILY cAMP-binding domain-like 514 707 IPR018490 -
Mtr6g1953 762 Gene3D Helix hairpin bin 513 578 - -
Mtr6g1953 762 Gene3D - 195 511 - -
Mtr6g1953 762 SUPERFAMILY Voltage-gated potassium channels 190 514 - -
Mtr6g1953 762 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1953 Mtr-Chr6 35599414 35607752 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1953 2 664 Ion Channels AT3G17700 59.265 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1953 K05391 - ccaj:109789004 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1953 6 35599414 35607752 Mtr6g1953 6 35599414 35607752 ECH