Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1951 ATGAATCATTTTGATAAAGATGAAATTCCTATTCTATCAGAAACACATGGACAACGATCTGATGAACCTCAGGATTCTACCTTCCGAAGAAACATATCGAGGACACGGAGTGCTTCAATTTCTATTCCTATGGCTTCTCTGGATCCATATGAGAGACAGCCGAATCTTGTCAGACATACTGGGCCGCTTTGTACCACAAAGAAAACTCCTGTTAGCCAAATGAGTGGTCCATTAAATGCTACACCTCTAACTGGAAATCCTTTTCAGAACAAGACAGAGAAGATTTTTACATTTTATGGCCCAGGTAGATATGAACACCTGTTAAGATCTGGACAACTAGGAATGTGTCATGATCCTTATTGTACTACTTGCCCTACGTACTTCAAAGTTTCTCAGCAAAGAAAACCAAGAGCTTCCAATATATTTGATCACAAGTTCCACAATTCTCTTCATGGCGACACCAAAGGTTTTGGAAGAAAACTTTTTTCTTTCTGCTCTTCATGTATTCCTGGAGTTATGAACCCTCACACGAAAGTCGTACTACAATGGAACAAGGTTTTGGCCATATTTTGCATGGTCACAATTTTTGTTGATCCGTTATTTTTCTTCTCACTCTATGTGAACAAGGATAATAAATGTATTCAAATCAACTTGACAATGGCAAGAACACTAGTTATACTTAGAAGCATAACTGATGTTGTGTATCTCTTGAACATTCTTCTCCAGTTTAGGTTGGCCTATGTTTCTTCTCCGCAGTCATATAATTTTGATGCTGGGGAATTAGTTGACCATCCAAGGAAAATAGCTGTTAAATACCTTAAGACTTATTTTTTCTTCGACGTATTTGTTGGATCACCTCTTCCTCAGAATATGACACCTCTCCTATGTGCATTTCTTAATCAAGTCAAGGAAAAGATAGGGAATAATAGTTTTTGCTGCACATTCGGCTCACAACAAATTCTCCTGTCATGTGTCACCGACGAGCTGAAGTGGAAGCTCCACGAGAGCAGACAAAAAAGCAGCAAGACCTTTGTGAGGTTTGAGATGCCTTATAATATATGGTGTGGAGGATGCAATTCTACGACTGCAAAGGGTGTCCGGTTCAATGCAGAGAAGAAGCAAGTTGGGAATTACTACTCTACAAAGCAAAACAATGCAAGTGATTTCCCTTCCGAGCTGGATATTTTCTATGGGAAACATATGTTGTTCAAAGTTGAAGTAGCTGAGGGAAATCTTATACATAATTGA 1248 0.3878 MNHFDKDEIPILSETHGQRSDEPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVRHTGPLCTTKKTPVSQMSGPLNATPLTGNPFQNKTEKIFTFYGPGRYEHLLRSGQLGMCHDPYCTTCPTYFKVSQQRKPRASNIFDHKFHNSLHGDTKGFGRKLFSFCSSCIPGVMNPHTKVVLQWNKVLAIFCMVTIFVDPLFFFSLYVNKDNKCIQINLTMARTLVILRSITDVVYLLNILLQFRLAYVSSPQSYNFDAGELVDHPRKIAVKYLKTYFFFDVFVGSPLPQNMTPLLCAFLNQVKEKIGNNSFCCTFGSQQILLSCVTDELKWKLHESRQKSSKTFVRFEMPYNIWCGGCNSTTAKGVRFNAEKKQVGNYYSTKQNNASDFPSELDIFYGKHMLFKVEVAEGNLIHN* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1951 415 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 302 - -
Mtr6g1951 415 Pfam Saf4/Yju2 protein 333 382 IPR007590 GO:0000398
Mtr6g1951 415 MobiDBLite consensus disorder prediction 1 54 - -
Mtr6g1951 415 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 302 - -
Mtr6g1951 415 SUPERFAMILY Voltage-gated potassium channels 175 291 - -
Mtr6g1951 415 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1951 Mtr-Chr6 35569543 35577227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1951 2 289 Ion Channels AT3G17700 42.405 6.27e-76 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1951 K05391 - gmx:100794895 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1951 6 35569543 35577227 Mtr6g1951 6 35569543 35577227 ECH