Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1947 ATGGATTGTCAAACCAAATTCCTCAGCATCTTCAGAGCATATTATGCTAAGAATTTTCTAAGTATAATAATCTTAGGACAGTATATTGCAAAATTATTCAGATTTTTGCCTAGGATAATTGGCCAGTCTCCAACCCAAATGGTATCATCAGAGTCAACCTTTGGCAATTTTATTGCATATCTTCTCAGTTTTATGTTCTTTAGCCATGTTGTTGGGTCAGGATGGTATCTCTTTGCTCTACAGAGGGTTCACCGTTGTTTGCAAGATGCCTGCCATCATTCTAATCTACATGGATGCATGGAGTTGATTAATTGTGATTCTAAAACTAGGATGAATATATCAGCCATAGTATGGAGAATTGATAAGGGTGCTGAAACTTGTATGAATGCCACATCTGGTGCTTTTTCTTATGGAATCTATGCCAATGCTATACCACTTACTAAAGAAACTAGGTGGATCAAAAAATACGTGTATTCACTCTTTTGGGGATTCCAGCAAATCATTACTCTGGCTGGTAATCAAACTCCAAGCTATTATTTGTGGGAAGTCCTCTTTACAATGTCCATCATGGCATTGGGACTCTTGCTTCTCATCGGAAACATACAGAGCTTTCTTCGAACTCTTAGCAAGAGGAGCCTAGAAATGATGCATAGAGGTTGTGATGTTGAGCAATGGATGAACCATCATCGGTTACCAGAAGATCTCAGAATGCTGAATGGAATAGTCGGCATAATGCTCCTGAAAGAACGGTTCTCGAGAATTTGCCAGAAAACCTCCAGATAG 783 0.3895 MDCQTKFLSIFRAYYAKNFLSIIILGQYIAKLFRFLPRIIGQSPTQMVSSESTFGNFIAYLLSFMFFSHVVGSGWYLFALQRVHRCLQDACHHSNLHGCMELINCDSKTRMNISAIVWRIDKGAETCMNATSGAFSYGIYANAIPLTKETRWIKKYVYSLFWGFQQIITLAGNQTPSYYLWEVLFTMSIMALGLLLLIGNIQSFLRTLSKRSLEMMHRGCDVEQWMNHHRLPEDLRMLNGIVGIMLLKERFSRICQKTSR* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1947 260 Pfam Ion transport protein 31 201 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr6g1947 260 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 237 - -
Mtr6g1947 260 SUPERFAMILY Voltage-gated potassium channels 52 235 - -
Mtr6g1947 260 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 6 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1947 Mtr-Chr6 35529604 35532639 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1947 13 236 Ion Channels AT3G17700 49.780 5.36e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1947 K05391 - gmx:100794895 277.715