Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1946 ATGAATCATTTTGAAAATGATGATATTCCGATTTTGTCAGAAACACATCCACAACGATCCGATTATTCTAGTTTCCAAAGGAGCACATCGAGGACACAAAGCACTTCAATTTATATTCATATGGATTCCCTTGATCCATATGAAAAACAGTCGAATCATGTCACAAATAAAAATGAACACTTGTTGGGGTCTTCAACTATATTTGATTCCAAGTTCCGAAATTCTCTGTATGGAGACGCCAAAGGTTTTGGAAGAAAACTTTTTTCTTCCTGCTCTTCATGTATTCCTAAAGTTATGAACCCCGACTGTAAAGTTGTACACTTATGGAACAAGTTTTTGGCCATAATTTGCTTTGTTGCAATTTTTGTGGATCCCTTATTTTTATTCTCATTCTATGTGAACAAGGATGATAAATGTCTTGTTACCAATTGGAAAACGGCAATAAAACTTCTTATTTATAAAAGCCTAATTGATTTCCTGTATCTCTTGAACATTCTTATCCAATTTAGGGTGGCTTATATTTCTCCTAGGTCCAGGGGGGTTGGTGCTGGAGATTTAATTGACCATCCCAAAATGATTGCTCTTAACTACCTCAAGAATGACTTTCTCATTGACTTCTTTATTGCATTACCTCTTCCTCAGGTACATTTCTTCCTATCGCTCCACGTTGTTGTTAAAACCCAAATGTTTTCAAAAGCCTAA 702 0.3547 MNHFENDDIPILSETHPQRSDYSSFQRSTSRTQSTSIYIHMDSLDPYEKQSNHVTNKNEHLLGSSTIFDSKFRNSLYGDAKGFGRKLFSSCSSCIPKVMNPDCKVVHLWNKFLAIICFVAIFVDPLFLFSFYVNKDDKCLVTNWKTAIKLLIYKSLIDFLYLLNILIQFRVAYISPRSRGVGAGDLIDHPKMIALNYLKNDFLIDFFIALPLPQVHFFLSLHVVVKTQMFSKA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1946 233 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 77 - -
Mtr6g1946 233 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 80 229 - -
Mtr6g1946 233 SUPERFAMILY Voltage-gated potassium channels 106 224 - -
Mtr6g1946 233 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 77 - -
Mtr6g1946 233 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 80 229 - -
Mtr6g1946 233 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1946 Mtr-Chr6 35526257 35528819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1946 45 232 Ion Channels AT3G17690 40.000 5.15e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1946 K05391 - gmx:100794895 210.69