Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1943 ATGCGCTTGACAATGGATAGATCATCTATTGGTCTTTTACTTCTCCTCGTCAGCATTACTTCATTTTCAGTGACATGTTGTTATTCGGCTTCTGAAGATGATCTAATGCAGACTTATATTGTATACACTGGAAATAGCATCAAAGATGAATCTTCTTCATTGCTGCTACACTACGAAAATTTGCTACAACAAGTTGTTGACAGCAATCAAATGCCAAAGCCAATACTTCAACACTACAAGAGGAGTTTCAATGGATTTGTCGCAAATCTAACAAAGAAAGAAGCTGATAGAATGGCTGGACTTGATGGGGTGGTGTCTGTTTTCCCGAATAAAAAGCGAAAACTCCTTACAACCAAATCATGGGATTTTATTGGCTTTCCGCAGAATGTGCAAAGAGAAAACTATGAAAGTGATGTTATCGTTGGTGTAATTGATTCTGGAATTTGGCCAGAGTCCGAAAGTTTCAACGATAAAGGTTTCAGTCCACCACCATCCAAATGGAAGGGCACGTGCCAGACTTCTGATGTTCCCTGCAATAATAAATTAATCGGAGCTAAGTATTATATATCTTTTTATGATGAACCCTCGAGTGAAGAATATCTTGATTCACCAAGGGATTCAAATGGCCATGGAACTCACACAGCATCAATTGCAGATGGGAACCTTGTTAGCATGGTGAGCATGCTAGGTCTTGCACAAGGAACAATAAGAGGAGGAGTTCCATCTGCACGCGTTGCTGTGTATAAAGTGTGTTGGTCTAAACACTGCTACGATGCAAATATTCTCGCCGCATTTGATGATGCAATTGCAGATGGGGTTGATATATTATCAGTCTCACTTTCATCAAATGAAAACGAAGATTCTATCTATTTCAGAGATGGATTGTCCATTGGATCATTCCATGCTATGAAACATGGAGTGCTGACAATATTCGCAGCAGGGAACGCGGGCCCACATCCTTCATCCCTACGAAATTTTTCACCCTGGGCCGTTGTTGTGGCTGCTAGTACGTTAGATAGGAAGTTTGTTACCAAGATCAAATTAGGTGACAATAGAACTTATGAGGGTGTCTCTTTGAACACATTTGACCTCGAGGGGAAACTATATCCAATTATCTATGGTGGAGATGCACCAAATAAACTAGCAGGCTACAATCGTCACCAATCCAGGAATCCAATTGCAACTATATTCAAGAGCAATGAGTTATTAGATACTTTGGCACCTGTTGTTGCTTCTTTCTCATCAAGGGGTCCAAGCAATGCCACACTTGAGATTCTTAAGCCGGATTTAATTGCGCCTGGAGTAGACATTATAGCAAGTTGGCCCGCAAGATCTCCTATTTCTGAAAATCTTGGTGAAAATAGAAAGTTGGAGTTCAACATTATGTCTGGAACATCAATGTCCTGCCCACATGTGTCAGGTGCAGCAGCATACCTTAAATCATTTCATCCTACATGGTCACCTGCAGCTCTCCGTTCAGCTCTAATGACAACAGCCAAACAAATGTCTCCAAAAAATAACCATTGTGCTGAATTCGCTTATGGAGCCGGTCAAATTGACCCTGTAAAGGCAGTGAATCCTGGCTTAATATACGAGACAAATGAAGGAGACTACATACGTCTTTTATGTGGTCAAGGTTTCAATGAGACAGTTTTACAACTAATCACAGAGGAAACAATCAGTTGCTCTGAGATCGGATATGCGACTGCAAGGGACTTAAATTACCCTTCATTTGCTCTCAAAGCCCCACACCCCAAACATTATTTAAGTGGAAGCTTCAAAAGGACCGTTACAAATGTTGGATTGGCAATGTCAACATACAGATCAATTGTGACATCTCATGAAGGTCTCAACATTTCAGTGAATCCTAGTGTTCTGACATTCACTTCACTAGGAGAAAAACAAACATTTGTTCTCGCTGTAAATGGAAGAATGAAAAATTATCTTGAGTCAGCTTATTTGATTTGGGATGATGGTAGGTTTCAAGTGAGGAGCCCCATTGTTATATTTGATGAGAGGGCAGAGAAAGGGAAGGGTGCCAAATCATATTGTATACATTACATCTATATTGTAATTTTGAATTTACTATTTTATATTATTATTGTATAA 2109 0.3983 MRLTMDRSSIGLLLLLVSITSFSVTCCYSASEDDLMQTYIVYTGNSIKDESSSLLLHYENLLQQVVDSNQMPKPILQHYKRSFNGFVANLTKKEADRMAGLDGVVSVFPNKKRKLLTTKSWDFIGFPQNVQRENYESDVIVGVIDSGIWPESESFNDKGFSPPPSKWKGTCQTSDVPCNNKLIGAKYYISFYDEPSSEEYLDSPRDSNGHGTHTASIADGNLVSMVSMLGLAQGTIRGGVPSARVAVYKVCWSKHCYDANILAAFDDAIADGVDILSVSLSSNENEDSIYFRDGLSIGSFHAMKHGVLTIFAAGNAGPHPSSLRNFSPWAVVVAASTLDRKFVTKIKLGDNRTYEGVSLNTFDLEGKLYPIIYGGDAPNKLAGYNRHQSRNPIATIFKSNELLDTLAPVVASFSSRGPSNATLEILKPDLIAPGVDIIASWPARSPISENLGENRKLEFNIMSGTSMSCPHVSGAAAYLKSFHPTWSPAALRSALMTTAKQMSPKNNHCAEFAYGAGQIDPVKAVNPGLIYETNEGDYIRLLCGQGFNETVLQLITEETISCSEIGYATARDLNYPSFALKAPHPKHYLSGSFKRTVTNVGLAMSTYRSIVTSHEGLNISVNPSVLTFTSLGEKQTFVLAVNGRMKNYLESAYLIWDDGRFQVRSPIVIFDERAEKGKGAKSYCIHYIYIVILNLLFYIIIV* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1943 702 Pfam Fibronectin type-III domain 572 669 IPR041469 -
Mtr6g1943 702 Pfam Peptidase inhibitor I9 38 115 IPR010259 -
Mtr6g1943 702 Gene3D Peptidase S8/S53 domain 117 541 IPR036852 GO:0004252|GO:0006508
Mtr6g1943 702 Gene3D - 542 671 - -
Mtr6g1943 702 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 115 IPR037045 -
Mtr6g1943 702 Gene3D - 339 401 - -
Mtr6g1943 702 CDD Peptidases_S8_3 114 499 IPR034197 -
Mtr6g1943 702 ProSitePatterns Serine proteases, subtilase family, serine active site. 464 474 IPR023828 -
Mtr6g1943 702 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Mtr6g1943 702 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Mtr6g1943 702 PRINTS Subtilisin serine protease family (S8) signature 463 479 IPR015500 -
Mtr6g1943 702 SUPERFAMILY Subtilisin-like 115 529 IPR036852 GO:0004252|GO:0006508
Mtr6g1943 702 ProSiteProfiles Serine proteases, subtilase domain profile. 120 525 - -
Mtr6g1943 702 Pfam Subtilase family 137 517 IPR000209 GO:0006508|GO:0008236
Mtr6g1943 702 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 387 669 IPR045051 -
Mtr6g1943 702 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 385 IPR045051 -
Mtr6g1943 702 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 58 385 - -
Mtr6g1943 702 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 387 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1943 Mtr-Chr6 35485539 35490772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1943 5 670 Subtilisin-like Serine Gene Family AT5G58830 43.707 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1943 - - mtr:MTR_6g075370 1272.3