Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1934 ATGAATGCTTCAACGAAGAAGAAAATTCAGAAAAAGTGCAAAATCAGAGGCTACAACATCAAACCAGAAGCACTCGAAGAAATCCTCTCTTTCGTTACTCGCTTTGAAAGCACCCAAGAAGAAGACGAAGCCACCGATATTGTTCTTGATCACCTCGAACAGGAATCTCTGAAATCTGCGATAATCGATGTGGAACCAGTGCAACGTGTGGTGAACTTGCTATTGGCAGCCGATGGGACGGAGGAAACTAATGATATGTTCGCTTCCTCCTCTTCTTCAGCCATTGGTGTCATTGATGTGTTTGATATTCCTAGATATAAATACGACCCTATCAGAAGGAACTTCTACCAACACCCAGGAAGCTTACCTCGTCTTGGGGACCCACCAGCAAAATCTGCTCTGTATAGAGATAGATTTTTGTTGTTGTCCCAAAGGCTTTCTCGCCATCAGGATTTTTCAAGGCCGGCTTTTGAGTCCGAACTTTCACAATTCCGGAGCTGTGAGATATCTCCTATTCAATCCCTGGTTGGGCGAAAAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACACTTTTATTTGGAAGACCTTAGCGCTTCTGTTGAAATCAACTTAACTGATGCTAAGATTACCACAGGATTCTTCTTAGAGAACACTATAGTTGTGGCCGAAGGCGAGATGCTTGCAGAGGGCATTTTTCAGATTTTTACATGTGGGTTTCCTCCACTAGAGGATAGAGATATATCACTTCAAGTGCTTGCGGGACATGATTTTTTTGGTGGTGGTACTTTTACAAAAGAAGAAACGATCAGGCAAGTAGAGATGGAGAAAAGAGCAGTCAATGACATGTTTGTCATACTATCTGATATTTGGCTAGACAAAGAAGAGACTTTTGGAAAGCTAGAGATTGTTCTTGATGGTTTTGAGAGTGTGGATGTGGTTCCTTCCTTATTTGTTTTCATGGGAGACTTTTGTTCTGAGAAATGTAGCCTTGCATTTAACGCTTATTCAAGCCTAAGGTCGCAATTTGGCAAACTAGGACAAATTATTGCTGCCCGTCCACGTTTAAAAGAGAACTGTCGATTTCTTTTTATTCCTGGTCCTGGCGATGCAGGCTCAACAGCTCTTCCAAGGTGTGCTCTGCCTAAATATTTAACCGAGGAGCTCCAAAATTATATTTCCGGTGCCATATTTTCAAGCAATCCTTGCAGGGTAAAATTCTATACCCAAGAAATTGTATTTTTCCGCCAGGATCAGCTATATAACATGCGTCGATCGTGTTTACTACCACCTTCTGAGACAGAAACTGTTGATCCTTTTCAGCATCTTGTTGCCACCATAACCCATCAGAGTCATCTCTGTCCACTCCCTCTAACTAAACAGCAACCCATCATATGGAATTATGATCATTCCCTTCATTTATATCCAAATCCGCACACGATAGTCTTGGGAGACAGAAGTCCGCAGAAGGCATTTAAGTACACAGGAATCACTTGTTTTAATACCGGATCCTTCTCAATGGATAGCACATTTGTAGTGTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCATCGTTGTGA 1593 0.4218 MNASTKKKIQKKCKIRGYNIKPEALEEILSFVTRFESTQEEDEATDIVLDHLEQESLKSAIIDVEPVQRVVNLLLAADGTEETNDMFASSSSSAIGVIDVFDIPRYKYDPIRRNFYQHPGSLPRLGDPPAKSALYRDRFLLLSQRLSRHQDFSRPAFESELSQFRSCEISPIQSLVGRKGRRWVMGVISQLEDGHFYLEDLSASVEINLTDAKITTGFFLENTIVVAEGEMLAEGIFQIFTCGFPPLEDRDISLQVLAGHDFFGGGTFTKEETIRQVEMEKRAVNDMFVILSDIWLDKEETFGKLEIVLDGFESVDVVPSLFVFMGDFCSEKCSLAFNAYSSLRSQFGKLGQIIAARPRLKENCRFLFIPGPGDAGSTALPRCALPKYLTEELQNYISGAIFSSNPCRVKFYTQEIVFFRQDQLYNMRRSCLLPPSETETVDPFQHLVATITHQSHLCPLPLTKQQPIIWNYDHSLHLYPNPHTIVLGDRSPQKAFKYTGITCFNTGSFSMDSTFVVYRPCSQEVELSSL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1934 530 PIRSF DNA_pol_epsilon_2 1 530 IPR016266 GO:0003677|GO:0006261|GO:0008622
Mtr6g1934 530 Gene3D - 2 73 - -
Mtr6g1934 530 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 7 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
Mtr6g1934 530 Pfam DNA polymerase alpha/epsilon subunit B 288 493 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1934 16 499 Core DNA Replication Machinery Family AT5G22110 63.918 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1934 K02325 - jre:109012089 785.023