Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1929 ATGGCAGAAACAAATTCAGTTGACGTGATTTTGGACTTTTTGAGGAGAAACCGGTTCACACGAGCTGAGGCAGCTTTGCGAAGTGAGCTCAACAACTGTTCTGATGTAAATGGGATCCTTCAAAAGCTTACCTTGGATGAAAAGAACTTGTGTGATTTGTCGCAGAATGATAAGGGGAAGCTAGTGGTAGAAAATCGAGGGTTGGACTCTCGTGATAGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATCGAGTGTGGAACTGCTAGAAATAATACCGAGAGCAAATGGAAAAATGCCACTCCGGCTGAGGAAAGGAATAAATCTAATGAAGTGGTTGGAACGAGTGGCACGAATTTCACTTTCTTGAAGAGTTCAGAGGACAGTGTGTTCGATTTGCACTCATGGAAGATTAATGGTCCTGCAGAGCCTTGCCAAAATGACGGTGCAAGCAAGGCTAGTAATACTTCGAAGGCCTCAATATCCCAGCAATCGAAAACTCAAATGAGTGAAGCCTCAATATCTCAGCAATTGAAAACTTCAATGAGTGAAGCCGCAATATCACAGCAATCGAAAGCTCAAACTAGTGAAGCCTTTGACGCAGCCAACAGTAATGTAAAAACTGCGGAGGAAAATAATGTTCCCGATGAGAAAAAACCCTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTACAGAACCAAAGATTAACCTTGTGCAAAACAAAGAATCTAGGGAAATTGATCGGCAGCAGCTTAAATTTAGTAGTTCGTCACTTAAAGAGAACTTGGCTGATAACGTCTTGTCAAGAGCTGATGAGAATGCAAATTCATCTTCTGATGTTTGGAAAGATTGTTCCATCAAGACTGTTTTCCCTTTTTCAAAGGGGGATGTGTCTATGAGCTATAGTAGCTCAACTTATTCAGAAAAAGTAGACGAAAAGAGAAAGCCAGAAATTGGTGATGCAAGGGCTTATATAAAAGAGCAGGTGGATGAAGTGGGGAGAGCTTTTTACTTGGGGAAGTTGCAAGGAAGTTCTGAACAGAATAACATTGGGGGATTAAGTTTTCCTCTTGCATTGGAGAAGCAGAAGGAAGAGTATCCAAGGCTTCCTCCTGTGAAAATTAAGTCAGAAGATAAGCCGTTGACTATTAATTGGAGCGAGAAGTTTGAATCTGATGGATTGGCTGCTAAGCTGGCAAGTGCCGACAGCTCTTTACTTATTGGATCATATCTGGATGTACCTATTGGACAAGAAATTAAAAATGCAGGTATGAGGAAGGCTACAGGGGGCAGTTGGCTGTCCGTTAGTCAAGGAATATCAGAGGATACCTCTGATCTTGTATCAGGTTTTGCTACAGTTGGTGATGGATTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGATGACGACGACGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCACGAAATCGATTACCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGCGTTCCAGATCCACAGGAAAGAGGTCCTGCCAAAGAGGAGGATGACGATCAATCTTTCGCGGAAGAGGATTCTTATTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAGCCAGTCATAGGGTCAGATGATCCTATCGGTATAACGGTTACTAATATGTATGGAAGGGCTAATGGTAATGATTTAATGGCTCAATACGATGGAGAATTGATGGATGTAGAGGAACTGAATCTGATGCACGCGGAGCCTGTCTGGCAGGGCTTTGTCCCTCAGACAAACGACCTGATCATGTTGGGAGATGGAAAAGTTCTGAATCATAGTGGAAGATCACGACTCGAGGAAATGGAAGATGATCAACACGGTTCAGTTAGGTCAATTGGGGTGGGTTTCAACAGTGATGCTGCCGATATCGGCAGTGAAGTGCATGGAAGTTTTATTGGTGGTAGCAGTGAAGGGGATTTAGAATATTTCCGTGATCGTGATAGTGGACTTGGGGGATCTAAACACACTCATCATGATTTCGGAAAGAATTCTATGGACAAATCATTTAAAAATAAGAAGAAAAATGACGAGATTGAGTCGAATAAATATGTCATTGGAGGTCATAAAGATGCACACTCACAAATAAAAACACATACTGAAGGCAACTTTTCATTTCCTCAATCTCTTAAAGATAGCCAGATGATTCAGGGTGGTGGTTCCAGTAAGTCGCCATGGTTAAATAATTGTAATGCGGATGAAACCGATGACTGTATGAATGCTTTTGAGGGATCGGATGAAATGCTTTCTTCGTGGAGGCAGAAGAGTAGTGATTCTTCACCCGAGAAAAGTTCTAGGGATGAGAATAATGCTCATGCGGTCAGATCTTCGAACTCTTCTCCAACTACTGTCGATAATTACGGGTACGCTGATAAAGAGCATGTCAAGCTAGAAAAGGATGATGAAGAAGTTGACATTACAAGGGAAGATGATTTAGGTGTTTCACAAGAGGATGAAGAGATTGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAAGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGTCGCTATCATGTCACCGAGTATCTGGGATCTGCTGCATTTAGTAAAGCTATACAGGCTCATGACCTGCACACAGGCGTGGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAGATCAAACTCCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTTTGCGGTTATATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGTGAGCTACTCAAAGCCAACTTATACGAGTTTCATAAATTCAACAGAGAATCAGGAGGGGAAGTGTACTTCACAATGCCAAGGTTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTATTTACATAACCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTACAGCCGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCATATGTTCAGTCTAGGTCCTATCGTGCTCCCGAGGTTATTCTCGGGCTTTCATACGACAAGAAGATTGATATCTGGTCCCTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCTTATTTCAAAATGATTCCCCGGCAACATTACTTGCTAGGGTAATCGGGATCATCGGTCCAATTGGTCAAAGTATGCTAGCAAAAGGACGGGATACCTATAAGTACTTCACAAAAAATCATATGCTTTATGAGAGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAGAAGACATCTTTGAGGCATAGATTACCGATGGGGGACCAAGGCTTCATTGACTTTGTTGATCATTTGCTCGAGGTTAACCCGAAGAAGCGACCTTCTGCATCTGAAGCTCTAAAGCACCCCTGGTTATCATACCCTTACGAACCGATATCATCTTGA 3630 0.4149 MAETNSVDVILDFLRRNRFTRAEAALRSELNNCSDVNGILQKLTLDEKNLCDLSQNDKGKLVVENRGLDSRDSVEVSKELIVKEIECGTARNNTESKWKNATPAEERNKSNEVVGTSGTNFTFLKSSEDSVFDLHSWKINGPAEPCQNDGASKASNTSKASISQQSKTQMSEASISQQLKTSMSEAAISQQSKAQTSEAFDAANSNVKTAEENNVPDEKKPLWLGSSGKASTEPKINLVQNKESREIDRQQLKFSSSSLKENLADNVLSRADENANSSSDVWKDCSIKTVFPFSKGDVSMSYSSSTYSEKVDEKRKPEIGDARAYIKEQVDEVGRAFYLGKLQGSSEQNNIGGLSFPLALEKQKEEYPRLPPVKIKSEDKPLTINWSEKFESDGLAAKLASADSSLLIGSYLDVPIGQEIKNAGMRKATGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKEEDDDQSFAEEDSYFSGEQYLQAKNVEPVIGSDDPIGITVTNMYGRANGNDLMAQYDGELMDVEELNLMHAEPVWQGFVPQTNDLIMLGDGKVLNHSGRSRLEEMEDDQHGSVRSIGVGFNSDAADIGSEVHGSFIGGSSEGDLEYFRDRDSGLGGSKHTHHDFGKNSMDKSFKNKKKNDEIESNKYVIGGHKDAHSQIKTHTEGNFSFPQSLKDSQMIQGGGSSKSPWLNNCNADETDDCMNAFEGSDEMLSSWRQKSSDSSPEKSSRDENNAHAVRSSNSSPTTVDNYGYADKEHVKLEKDDEEVDITREDDLGVSQEDEEIAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIGQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVDHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1929 1209 SUPERFAMILY Protein kinase-like (PK-like) 887 1202 IPR011009 -
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 728 754 - -
Mtr6g1929 1209 Pfam Protein kinase domain 898 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1929 1209 CDD PKc_DYRK_like 898 1200 - -
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 143 236 - -
Mtr6g1929 1209 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1207 - -
Mtr6g1929 1209 PANTHER - 2 1207 - -
Mtr6g1929 1209 ProSiteProfiles Protein kinase domain profile. 898 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1929 1209 SMART serkin_6 898 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 503 533 - -
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 149 211 - -
Mtr6g1929 1209 Coils Coil 840 870 - -
Mtr6g1929 1209 Gene3D Transferase(Phosphotransferase) domain 1 952 1200 - -
Mtr6g1929 1209 Coils Coil 193 213 - -
Mtr6g1929 1209 Gene3D Phosphorylase Kinase; domain 1 892 979 - -
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 96 117 - -
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 797 812 - -
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 773 817 - -
Mtr6g1929 1209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1024 1036 IPR008271 GO:0004672|GO:0006468
Mtr6g1929 1209 MobiDBLite consensus disorder prediction 680 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1929 Mtr-Chr6 35243099 35252564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1929 897 1195 MAP Kinase Gene Family AT5G19010 31.975 3.60e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mtr6g1929 Pkinase 8.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1929 - - gmx:100786225 1926.37