Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1927 ATGGCTATACAATCACCTTCCTCATCCACTTCATTTTCCTATGGATTCACTTACCAAGTGTTCATCAGTTTTAGGGGCACTGACACTCGGCACGGTTTTACCGGAAATCTCTACAAGGCTCTTACTGACAAGGGAATCCATACCTTCATTGATGACAATGATCTTCAAAGAGGAGATGAAATCACACCATCACTCCTCAAGGCCATTGATGAATCTAGGATTTTTATTCCTGTGTTTTCTCTCAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTCCACATAATTCACTGCTACGAGACAAAGGGTCGCCTCGTTTTGCCTGTTTTCTTCGGTGTGGAACCAACTAATGTGAGACATCATAAAGGTAGTTATGGCAAAGCATTGGCTGAGCATGAAAAGAGGTTTCAAAATGATCCGAAAAACATGGAGAGGTTGCAGGGATGGAAAGAGGCTCTGAGCCAGGCTGCTAACTTGTCCGGCTACCATGATAGTCCTCCCAGATATGAATACAAGTTTATTGAAGAGATAGTCAAATACATCTCCAACAAGATCAGTCGTCAGCCCTTACATGTTGCCAATTACCCTGTTGGATTACAGTCTCAAGTACAAAGAGTGAAATCAATTCTTGATAATGGATCTGATGATGGGGTCCATATGGTTGGAATTTTTGGGATTGGAGGCTTGGGAAAATCAACACTTGCAAGAGCAATCTATAATTTGGTTGCTGATCAATTTGAAGGTTTATGTTTTCTTCATAATGTGAGAATGAATTCAGCTAAAAATAACTTGGAACATCTCCAAGAGAAGCTCCTTTTTAAAACAACTGGATCGGAAATTAATTTAGACCATGTTAGTGACGGAATTCCAATCATTAAGGAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTCGACGATGTTGACAAACTGGATCAGCTACAGGCTTTGGCTGGAGGACTCGATTGGTTTGGTCCTGGAAGCAGAGTCATCATCACCACCCGAGATAAACACTTACTAGACCATCATGGGATAGAAAAAACGTATGCAGTAAAAGGGTTGAATGGGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAGTGACAATGTTCCATCAAGGTACAAAGAGATTTTAAGTCGTGCAGTTTCATATGTTTCTGGCCTTCCGTTAGTTATAGAAATAGTGGGTTCTAACTTGTTTGGAAAGAACATAGAAGAATGGAAGTATATATTAGATGGGTATGACAGGATTCCCAATAAAGAGATCCAAAAGATACTTAGAGTGAGCTATGATGCTTTGGAAGAAGAGGAGCAAAGTGTCTTTCTGGACATTGCTTGTTGCTTCAAAGGACATGGATGGGAAGATGCCAAATATATGCTTCATGCTCATTATGGCCATTCCATAACACATCATCTAGCAGTGTTGGCTGAAAAATCTCTCATAAACCAATATAGGGAATATGGTTGTGTGACATTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCAACTAAAGAGCCTGGAGAAAGAAGTAGGTTATGCTGTCAGGATGATATAACTCGGGTTTTAAGAGAAAACACTGGAACTAGTAAAATTGAAATGATATATATGAATCTCCACTCCATGGAATCCGTGATAGACAAGAAAGGAAAGGCCTTCAAGAAGATGACAAAACTCAAAACAGTTATCATTGAAAATGGCCATTTTTCTGAAGGTCTCAAGCATCTACCAAGAAGTTTGAGTGTATTGAAATGGAAGGGATGTTTATCGAAGTGTCTGTCAACTAGTATTTTAAACAAGAAGTTCCAGAATATGAAAATCTTGACATTGGACGATTGTGAATATTTAACACATATACCCGATGTCTCAAGCCTTTCAAATTTAGAAAAGTTATCGTTTGAACATTGTAAGAATTTAATTACAATTCACAATTCGATTGGACACCTAAGTAAACTTGAAAGGTTAAGTGTAACTGGTTACAGAAAGCTCAAACATTTTCCACCTTTAGGTTTGGCATCTCTTAAGGAACTTAATCTCATGGGTGGCTCGTGTCTCGAAAATTTTCCAGAATTATTATGCAAGATGGCACATATAAAAGAGATTGATATATTTTATATTTCCATAGGAAAACTGCCATTTTCATTTCAAAATCTCAGTGAACTTGATGAGTTCACAGTGTCATATGGAATCCTGAGGTTCCCAGAACATAATGATAAGATGTATTCAATAGTGTTTTCAAATATGACAAAGCTTTCTCTCTTCGATTGCTACCTCTCAGATGAATGTCTCCCAATACTTCTCAAGTGGTGTGTTAATATGACATATCTAGATTTATCATATAGCGATTTCAAAATTCTTCCAGAGTGCCTTAGTGAAAGTCACCATCTTGTGGAAATTATTGTGAGGTACTGCAAGTCCCTTGAGGAAATTAGAGGGATTCCACCAAATCTTGGAAGTCTCTATGCTTATGAATGCAAATCATTGAGTTCATCATGTAGAAGAATGTTAATGAGTCAGCAACTACATGAGGCTCGATGCACTCGTTTTGATTTCCCAAACGGAACAGAGCTGGGGATACCAGATTGGTTTGAGCACCAAAGCAGGGGAGACACAATTTCTTTTTGGTTTCATAAAGAAATCCCTTCTATATCTTGTATTTTTATTCTTCCGGAACGCCGTTGGGCCTCAAATTTCAGTTTATATGTGAATGGATATGAAATTGAGATAGGTTGTTATCGCTCTCAACGTTTGTTCCCGGACCATATAACTTTGTTTGATATGAAATTGGAAGAACTCTGTAAAGGACAACACATGTATAATATGGACAAAGGACTTTTGAAAAGTGAATGGATCCATGTGGAGTTTAGGTCGAAGGATCACGAGAATAGTGTTTATGCACAAATGGGAATCCACGTGTGGAATGAGAAAAGCAACACGGAGGAGGAGAATGTGGTATTCACAGATCCTTATCTTAAAAAGCAAAGATTGGTGGAAGTGGGAGTTTCTGTTGAGAATATGGATCAGAACCTATTATTAGAGTTTGTTGTAGTATTTATGGTTATGACTGTTATGATTTTAATTATAGGAATTATGGGAGGTTATAGATTTATGTTGTCTGTTACAAATTTATAG 3159 0.3783 MAIQSPSSSTSFSYGFTYQVFISFRGTDTRHGFTGNLYKALTDKGIHTFIDDNDLQRGDEITPSLLKAIDESRIFIPVFSLNYASSSFCLDELVHIIHCYETKGRLVLPVFFGVEPTNVRHHKGSYGKALAEHEKRFQNDPKNMERLQGWKEALSQAANLSGYHDSPPRYEYKFIEEIVKYISNKISRQPLHVANYPVGLQSQVQRVKSILDNGSDDGVHMVGIFGIGGLGKSTLARAIYNLVADQFEGLCFLHNVRMNSAKNNLEHLQEKLLFKTTGSEINLDHVSDGIPIIKERLCRKKILLILDDVDKLDQLQALAGGLDWFGPGSRVIITTRDKHLLDHHGIEKTYAVKGLNGTEALELLRWMAFKSDNVPSRYKEILSRAVSYVSGLPLVIEIVGSNLFGKNIEEWKYILDGYDRIPNKEIQKILRVSYDALEEEEQSVFLDIACCFKGHGWEDAKYMLHAHYGHSITHHLAVLAEKSLINQYREYGCVTLHDLIEDMGKEVVRQESTKEPGERSRLCCQDDITRVLRENTGTSKIEMIYMNLHSMESVIDKKGKAFKKMTKLKTVIIENGHFSEGLKHLPRSLSVLKWKGCLSKCLSTSILNKKFQNMKILTLDDCEYLTHIPDVSSLSNLEKLSFEHCKNLITIHNSIGHLSKLERLSVTGYRKLKHFPPLGLASLKELNLMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQNLSELDEFTVSYGILRFPEHNDKMYSIVFSNMTKLSLFDCYLSDECLPILLKWCVNMTYLDLSYSDFKILPECLSESHHLVEIIVRYCKSLEEIRGIPPNLGSLYAYECKSLSSSCRRMLMSQQLHEARCTRFDFPNGTELGIPDWFEHQSRGDTISFWFHKEIPSISCIFILPERRWASNFSLYVNGYEIEIGCYRSQRLFPDHITLFDMKLEELCKGQHMYNMDKGLLKSEWIHVEFRSKDHENSVYAQMGIHVWNEKSNTEEENVVFTDPYLKKQRLVEVGVSVENMDQNLLLEFVVVFMVMTVMILIIGIMGGYRFMLSVTNL* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1927 1052 Gene3D - 354 438 IPR042197 -
Mtr6g1927 1052 SUPERFAMILY L domain-like 494 842 - -
Mtr6g1927 1052 SMART AAA_5 218 355 IPR003593 -
Mtr6g1927 1052 Gene3D Ribonuclease Inhibitor 679 859 IPR032675 -
Mtr6g1927 1052 Gene3D Ribonuclease Inhibitor 528 678 IPR032675 -
Mtr6g1927 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 448 IPR027417 -
Mtr6g1927 1052 CDD AAA 198 337 - -
Mtr6g1927 1052 Pfam TIR domain 18 187 IPR000157 GO:0007165
Mtr6g1927 1052 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1927 1052 Gene3D - 15 183 IPR035897 -
Mtr6g1927 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 965 IPR044974 GO:0006952
Mtr6g1927 1052 Gene3D - 184 348 IPR027417 -
Mtr6g1927 1052 PANTHER ARCHAEAL ATPASE 28 965 - -
Mtr6g1927 1052 Pfam NB-ARC domain 201 437 IPR002182 GO:0043531
Mtr6g1927 1052 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
Mtr6g1927 1052 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 163 IPR035897 -
Mtr6g1927 1052 PRINTS Disease resistance protein signature 221 236 - -
Mtr6g1927 1052 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g1927 1052 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g1927 1052 PRINTS Disease resistance protein signature 632 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1927 Mtr-Chr6 35211979 35215857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1927 12 809 WRKY Transcription Factor Family AT4G12020 27.844 8.54e-64 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1927 - - mtr:MTR_6g071935 1254.97