Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1926 ATGGCTATGCAATCACCTTCCTCTTCCACTTCAATTTCCTATGAGTACAAATACCAAGTATTCCTCAGTTTCAGAGGAAGTGACACTCGGTACGGTTTCACCGGGAATCTCTACAAGGCTCTTACTGACAAGGGAATCAACACCTTCATTGATAAGAATGGTCTTCAAAGAGGAGATGAAATCACACCATCACTTCTCAAGGCCATTGAAGAGTCTAGGATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGGGTCGCCTCGTTCTGCCTGTTTTCTTTGGTGTGGAACCTACTGTTGTGCGACATCGTAAAGGTAGTTATGGTGAAGCATTGGCTGAGCATGAAAAGAGGTTTCAAAATGATCCGAAAAACATGGAGAGGTTGCAAGGATGGAAAAAGGCTCTGAGCCAGGCTGCTAACTTGTCCGGCTACCATGATAGTCCTCCTGGATATGAATACAAGCTTATTGGAAAGATAGTCAAATACATCTCCAACAAGATCAGTCGACAGCCCTTACATGTTGCCACTTACCCTGTTGGATTGCAGTCTCGAGTACAACAAGTGAAATCGCTTCTTGATGAGGGATCCGATGATGGGGTCCATATGGTTGGAATTTATGGCATTGGAGGTTTGGGGAAATCAACACTTGCAAGACAAATCTATAATTTTGTTGCAGATCAATTCGAAGGTTCATGTTTTCTTCATGATGTGAGAGAGAATTCAGCTCAAAATAACTTGAAATATCTCCAAGAGAAGCTCCTTTTAAAAACAACAGGTTTGGAAATTAAGTTAGACCATGTTAGTGAGGGAATTCCAGTCATAAAGGAAAGATTATGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTGACAATTTGAAGCAACTGCATGCTTTGGCTGGAGGACTTGATTGGTTCGGATGTGGAAGCAGAGTCATCATTACCACTCGAAACAAAGACTTACTAAGCAGTCATGGCATAGAAAGTACACATGCAGTAGAAGGGTTGAATGAGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAGTGATAAAGTTCCTTCAGGTTACGAAGACATTTTAAACCGTGCAGTTGCATATGCTTTTGGCCTTCCGTTAGTTTTAGAAGTAGTGGGTTCTAACTTGTTTGGAAAGAGCATAGAAGATTGGAAGCATACATTAGATGGGTATGACAGGATTCCCAATAAAGAGATCCAAAAGATACTTAAGGTGAGCTATGATGCTTTGGAAGAAGAGGAGCAGAGTGTCTTTCTTGACATCGCTTGCTGCTTCAAAGGATATCAATGGAAGGAGTTCGAAGATATACTTTGTGCTCATTATGACCATTGCATAACACATCATCTAGGAGTGTTGGCTGGAAAATCTCTCGTTAAGATTAGTACTTATTACCCTTCGGGATCTATTAATGATGTGAGATTACATGACTTGATAAAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCACCTAAAGAGCCTGGAGAACGAAGTAGGTTATGGCGTCAAGAAGATATAATTCATGTTTTAAAAGAAAACACTGGAACTAGTAAAATTGAAATGATATATATGAATCTCCACTCCATGGAATCCGTGATAGACAAGAAAGGAAAGGCCTTCAAGAAGATGACAAAACTGAAAACACTTATCATTGAAAATGGCCTTTTTTCTGGAGGTCTCAAGTATCTTCCAAGCAGTTTGCGTGTATTGAAATGGAAAGGATGTTTATCGAAGTGTCTGTCATCTAGTATTTTAAACAAGAAGTTTCAGAATATGAAAGTCTTGACATTGGACTATTGTGAATATTTAACACATATACCCGATGTCTCAGGCCTTTCAAATTTAGAAAAGTTATCGTTTACATGTTGTGATAATTTAATTACAATTCACAATTCTATTGGACACCTAAATAAACTTGAATGGTTAAGTGCATATGGTTGCAGAAAGCTCGAACATTTTCGACCTTTAGGGTTGGCATCTCTTAAGAAATTGATACTCTATGAGTGTGAGTGTCTTGATAATTTTCCAGAATTATTATGCAAGATGGCACATATAAAAGAGATTGATATATCTAATACTTCCATAGGAGAACTGCCATTTTCATTTCAAAATCTCAGTGAACTTCATGAGTTAACAGTGACATCTGGAATGAAGTTCCCAAAAATAGTGTTTTCAAATATGACAAAGCTTTCTCTCTCCTTTTTCAACCTCTCAGATGAATGTCTCCCAATAGTTCTCAAGTGGTGTGTTAATATGACACATCTAGACTTATCATTTAGCAATTTCAAAATTCTTCCTGAGTGCCTTCGTGAATGTCACCATCTTGTTGAAATTAATGTGATGTGCTGCGAGTCTCTTGAGGAAATTAGAGGGATTCCACCAAATCTAAAAGAGCTTTGTGCTAGATATTGTAAATCATTGAGTTCCTCAAGTAGAAGAATGTTAATGAGTCAGAAACTACATGAGGCGGGATGCACCAAGATTTATTTCCCAAATGGAAGAGAGGGGATACCAGATTGGTTTGAGCACCAAAGCAGGGGACCCATAATTTCTTTCTGGTTTCGTAAAGAAATCCCTTCAATAACTTGTATATTTATTCTTCCGAAAGGCAATGAGTATGCCACAAGTGTCAATGTTTTTGTGAATGGATATGAAATTGAGATAGGTTGTTATTGGTCTCTCTTTTTCTTCACGGACCATACAACTTTGTTTCATACCTCAAAATTGAATGAACTCATTAAAACACAATGCGAGTATAATATAGAGAAAGGACTTTTGAAAAATGAATGGATCTATGTGGAGTTTAAGTTGAAGGATCATGAGAATAGTGTTTATGCACAAAGGGGAATCCACGTGTGGAATGAGAAAAGCAACACGGAGGAGGAGAATGTGGTATTCACAGATCCTTGTATTACAAAGACAAAATCAGATGAATATCTCAATCAGAGCAATAATACTTCATTATCACAATTTGAGCCTCCTCTAAAAAAGCAAAGATTGGTGGAAGTTGGAGTTTCAGAGACAGAGGAGGATATCAATGCTTCATTGCAACAACAGGAATTGATGAAAGAGGAACAAAGAAAGACATGGGGTACATTCTGA 3183 0.3798 MAMQSPSSSTSISYEYKYQVFLSFRGSDTRYGFTGNLYKALTDKGINTFIDKNGLQRGDEITPSLLKAIEESRIFIPVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTVVRHRKGSYGEALAEHEKRFQNDPKNMERLQGWKKALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISRQPLHVATYPVGLQSRVQQVKSLLDEGSDDGVHMVGIYGIGGLGKSTLARQIYNFVADQFEGSCFLHDVRENSAQNNLKYLQEKLLLKTTGLEIKLDHVSEGIPVIKERLCRKKILLILDDVDNLKQLHALAGGLDWFGCGSRVIITTRNKDLLSSHGIESTHAVEGLNETEALELLRWMAFKSDKVPSGYEDILNRAVAYAFGLPLVLEVVGSNLFGKSIEDWKHTLDGYDRIPNKEIQKILKVSYDALEEEEQSVFLDIACCFKGYQWKEFEDILCAHYDHCITHHLGVLAGKSLVKISTYYPSGSINDVRLHDLIKDMGKEVVRQESPKEPGERSRLWRQEDIIHVLKENTGTSKIEMIYMNLHSMESVIDKKGKAFKKMTKLKTLIIENGLFSGGLKYLPSSLRVLKWKGCLSKCLSSSILNKKFQNMKVLTLDYCEYLTHIPDVSGLSNLEKLSFTCCDNLITIHNSIGHLNKLEWLSAYGCRKLEHFRPLGLASLKKLILYECECLDNFPELLCKMAHIKEIDISNTSIGELPFSFQNLSELHELTVTSGMKFPKIVFSNMTKLSLSFFNLSDECLPIVLKWCVNMTHLDLSFSNFKILPECLRECHHLVEINVMCCESLEEIRGIPPNLKELCARYCKSLSSSSRRMLMSQKLHEAGCTKIYFPNGREGIPDWFEHQSRGPIISFWFRKEIPSITCIFILPKGNEYATSVNVFVNGYEIEIGCYWSLFFFTDHTTLFHTSKLNELIKTQCEYNIEKGLLKNEWIYVEFKLKDHENSVYAQRGIHVWNEKSNTEEENVVFTDPCITKTKSDEYLNQSNNTSLSQFEPPLKKQRLVEVGVSETEEDINASLQQQELMKEEQRKTWGTF* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1926 1060 Gene3D - 184 348 IPR027417 -
Mtr6g1926 1060 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
Mtr6g1926 1060 Gene3D - 354 438 IPR042197 -
Mtr6g1926 1060 Pfam TIR domain 17 186 IPR000157 GO:0007165
Mtr6g1926 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 163 IPR035897 -
Mtr6g1926 1060 Pfam NB-ARC domain 202 437 IPR002182 GO:0043531
Mtr6g1926 1060 PANTHER ARCHAEAL ATPASE 28 965 - -
Mtr6g1926 1060 SUPERFAMILY L domain-like 556 853 - -
Mtr6g1926 1060 SUPERFAMILY "Winged helix" DNA-binding domain 424 538 IPR036390 -
Mtr6g1926 1060 Gene3D Ribonuclease Inhibitor 529 867 IPR032675 -
Mtr6g1926 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 965 IPR044974 GO:0006952
Mtr6g1926 1060 Gene3D - 14 183 IPR035897 -
Mtr6g1926 1060 PRINTS Disease resistance protein signature 221 236 - -
Mtr6g1926 1060 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g1926 1060 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g1926 1060 PRINTS Disease resistance protein signature 614 630 - -
Mtr6g1926 1060 SMART AAA_5 218 357 IPR003593 -
Mtr6g1926 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 448 IPR027417 -
Mtr6g1926 1060 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1926 1060 Coils Coil 1032 1052 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1926 Mtr-Chr6 35195542 35201918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1926 18 805 WRKY Transcription Factor Family AT4G12020 28.351 4.97e-66 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1926 - - mtr:MTR_6g071935 1309.28