Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1925 ATGGCTATACAATCACCTTCCTCATCCTCTTCATTCTCCCATGGATTCACTTACCAAGTGTTCCTCAGTTTTAGGGGCACTGACACTCGGCACAGTTTTACCGGAAATCTCTACAAGGCTCTTACTGACAAGGGAATCCATACCTTCATTGATGACAATGATCTTCAAAGAGGAGATGAAATCACACCATCACTCCTCAAGGCCATTGATGAATCTAGGATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCGTTTTGTTTGGACGAACTTGTCCACATAATTCACTGCTACAAGACAAAGGGTCGCCTCGTTTTGCCTGTTTTCTTCGGCGTGGAACCTACTAACGTGCGACATCAGAAAGGTAGTTATGGTGAAGCATTGGCTGAGCATGAAAAGAGGTTTCAAAATGATAAGAATAACATGGAGAGGTTGCAGCGATGGAAAGTGGCTCTGAGCCAGGCTGCTAACTTGTCCGGCTACCATGATAGTCCTCCTGGATATGAATACAAGCTTATTGGAAAGATAGTCAAATACATCTCCAACAAGATCAGTCGACATCCCTTACATGTTGCCACTTACCCTGTTGGATTGCAGTCTCGAGTACAACAAGTGAAATCACTTCTTGATGAGGGACCTGATGATGGGGTCCATATGGTTGGAATTTTTGGCATTGGAGGCTTGGGTAAATCAACACTTGCAAGAGCAATTTATAATTTTGTTGCTGATCAATTTGAAGGTTTATGTTTTCTTCATGATGTGAGAGAGAATTCAGCTCAAAATGACTTGAAACATCTCCAAGAGAAGCTTCTTCTAAAAACAACTGGATCGAAAATAAAGTTAGATCATGTTTGTGAGGGGATTCCATTCATAAAGGAAAGGCTGTGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTGACGATAGGAAGCAACTGCATGCTTTGGCTGGGGGACTTGATTGGTTTGGCCCTGGAAGCAGAGTTATCATCACCACTCGAAATAAACACTTACTAGCCTCTCATAGGATAGAAAAAACATATCCAGTAGAAGGGTTGAATGGGATAGATGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAATGACAACGTTCCTTCAGGTTATGAAGACATTTTAAACCGTGCAGTTGCATATGCTTCTGGCCTTCCGTTAGTTTTAGAAGTAATGGGTTCTAACTTGTTTGGCAAGAACATAGAAGAATGGAAGAATACATTAGATGGGTATGACAGGATTCCCAATAAAGAGATCCAAAAGATACTTAGAGTGAGCTATGATGCTTTGGAAGAAGAGGAGCAGAGTGTCTTTCTTGACATTGCTTGTTGCTTAAAAGGGTATAGATTGACAGAGGTTGAAAATATACTTCATTCTCATTATGACCATTGTATAACACATCATCTACGAGTGTTGGCTGAAAAGTCACTCATAGACACAAATTATTGTTATGTGACATTACATAACTTGATAGAGGATATGGGTAAAGAAGTCGTCCGACAAGAATCAATTAAAGAGCCTGGAGAAAGAAGTAGGTTATGCTGCCATGATGATATAGTTAATGTCTTAAAAGAAAACACTGGAACTAGTAAAATTCAAATGATGTATATGAATTTTCACTCCATGGAATCCATAATAGACCAAAAAGGAATGGCCTTCAAGAAGATGACAAGATTGAAAACACTTATCATTGAAAATGGCCATTGTTCTAAAGGTCTCAAGTATCTTCCAAGCAGTTTGAAAGCATTGAAATGGGAAGGATGTTTATCAAAGTCTCTATCGTCTAGTATTTTAAGCAAGAAGTTCCAGGATATGACAATCTTGATATTGGACCATTGTGAATATTTAACACATATACCCGATGTCTCAGGCCTTTCAAATTTAGAAAAGTTATCGTTTGAATGTTGTTATAATTTAATTACAATTCACAATTCGATTGGACACCTAAACAAACTTGAAAGGTTAAGTGCATTTGGTTGCAGAAAGCTCAAACGTTTTCCACCTTTAGGGTTGGCATCTCTTAAGGAACTGGATATCTGTTGTTGTTCGAGTCTCAAGAGTTTTCCAGAATTATTATGCAAGATGACAAATATCAAAGAGATTGATTTAGATTATAATATATCCATAGGAGAATTGCCATCTTCATTTCAAAATCTCAGTGAACTTGATGAGTTATCAGTACGGGAAGCTAGAATGCTGAGGTTCCCAAAACATAATGATAGAATGTATTCTAAAGTGTTTTCAAAGGTGACAAAGCTTAGAATCTACGAGTGCAACCTCTCAGATGAATATCTCCAAATAGTTCTTAAGTGGTGTGTTAATGTGGAATTGCTAGACTTATCACATAACAATTTCAAAATTCTTCCTGAGTGCCTTAGTGAATGTCACCATCTTAAGCATCTTGGTTTGCATTACTGCTCTTCTCTTGAGGAAATTAGAGGGATTCCACCAAATCTTAAAGAGCTTTCCGCATATCAATGTAAATCATTGAGTTCCTCATGTAGAAGAATGTTAATGAGTCAGGAACTACATGAGGCTCGATGCACTCGTTTTCTTTTCCCAAACGAAAAAGAGGGGATACCAGATTGGTTTGAGCACCAAAGCAGGGGAGACACAATTTCTTTCTGGTTTCGTAAAGAAATCCCTTCTATGACTTATATTTGTATTCCTCCGGAAGGCAATAATTGGTCGGCTGACACAAGAGTCAATTATTTTGTGAATGGATATGAAATTGAGATAGATTATTGTCCCCGCTTTAGCTATGTGTACTTTAAGCATACAAATTTGTTTCATACCCCGAAATTGAATGAACTCGGTAAAAGGCAATTTGAGTATATAATGGAGAAAGGACTTTTGAAAAATGAATGGATCCATGTGGAGTTTAAGGTGAAGGATCGTGACAATATAATATTCAGAAATGCACAAATGGGAATCCACGTGTGGAAAGAGAAAAGCAACACGGAGGAGGAGAATGTGGTATTTATCGATCCTTATATTAGAAAGACAAAATCAAATGAATATCTCAATGCTTCATTGTCACAAAAGAAACGGAAACGAAATAAATTTTCAATCCGTATAAATCTTCAGAAAAAGATTTGGGTGCATCCTAAATTCAGGGCTAGATTCAGAAAACAAAAAGAGCACCAAGATTCTCTCAATTAA 3183 0.3761 MAIQSPSSSSSFSHGFTYQVFLSFRGTDTRHSFTGNLYKALTDKGIHTFIDDNDLQRGDEITPSLLKAIDESRIFIPVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTNVRHQKGSYGEALAEHEKRFQNDKNNMERLQRWKVALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISRHPLHVATYPVGLQSRVQQVKSLLDEGPDDGVHMVGIFGIGGLGKSTLARAIYNFVADQFEGLCFLHDVRENSAQNDLKHLQEKLLLKTTGSKIKLDHVCEGIPFIKERLCRKKILLILDDVDDRKQLHALAGGLDWFGPGSRVIITTRNKHLLASHRIEKTYPVEGLNGIDALELLRWMAFKNDNVPSGYEDILNRAVAYASGLPLVLEVMGSNLFGKNIEEWKNTLDGYDRIPNKEIQKILRVSYDALEEEEQSVFLDIACCLKGYRLTEVENILHSHYDHCITHHLRVLAEKSLIDTNYCYVTLHNLIEDMGKEVVRQESIKEPGERSRLCCHDDIVNVLKENTGTSKIQMMYMNFHSMESIIDQKGMAFKKMTRLKTLIIENGHCSKGLKYLPSSLKALKWEGCLSKSLSSSILSKKFQDMTILILDHCEYLTHIPDVSGLSNLEKLSFECCYNLITIHNSIGHLNKLERLSAFGCRKLKRFPPLGLASLKELDICCCSSLKSFPELLCKMTNIKEIDLDYNISIGELPSSFQNLSELDELSVREARMLRFPKHNDRMYSKVFSKVTKLRIYECNLSDEYLQIVLKWCVNVELLDLSHNNFKILPECLSECHHLKHLGLHYCSSLEEIRGIPPNLKELSAYQCKSLSSSCRRMLMSQELHEARCTRFLFPNEKEGIPDWFEHQSRGDTISFWFRKEIPSMTYICIPPEGNNWSADTRVNYFVNGYEIEIDYCPRFSYVYFKHTNLFHTPKLNELGKRQFEYIMEKGLLKNEWIHVEFKVKDRDNIIFRNAQMGIHVWKEKSNTEEENVVFIDPYIRKTKSNEYLNASLSQKKRKRNKFSIRINLQKKIWVHPKFRARFRKQKEHQDSLN* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1925 1060 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
Mtr6g1925 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 971 IPR044974 GO:0006952
Mtr6g1925 1060 Gene3D - 15 183 IPR035897 -
Mtr6g1925 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Mtr6g1925 1060 PRINTS Disease resistance protein signature 221 236 - -
Mtr6g1925 1060 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g1925 1060 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g1925 1060 PRINTS Disease resistance protein signature 676 692 - -
Mtr6g1925 1060 Gene3D Ribonuclease Inhibitor 537 748 IPR032675 -
Mtr6g1925 1060 ProSitePatterns Alpha-L-fucosidase putative active site. 584 595 IPR018526 GO:0004560|GO:0005975
Mtr6g1925 1060 Gene3D Ribonuclease Inhibitor 749 856 IPR032675 -
Mtr6g1925 1060 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1925 1060 PANTHER ARCHAEAL ATPASE 28 971 - -
Mtr6g1925 1060 SUPERFAMILY L domain-like 505 871 - -
Mtr6g1925 1060 Gene3D - 184 349 IPR027417 -
Mtr6g1925 1060 Gene3D - 355 438 IPR042197 -
Mtr6g1925 1060 Pfam NB-ARC domain 202 437 IPR002182 GO:0043531
Mtr6g1925 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mtr6g1925 1060 Pfam TIR domain 18 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1925 Mtr-Chr6 35190230 35235777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1925 12 850 WRKY Transcription Factor Family AT4G12020 27.222 2.74e-57 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1925 - - mtr:MTR_6g074855 1417.14