Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1924 ATGACACATCATGTTAGAGTGTTGGTTGATGAATCTCTCATAAAGATTAGTGCTCCAGATCCATACTACACTTCTTATATTGTTACATTACATGACTTGATAGAGTATATGGGTATAGAAATAGTCCGACAAGAATCAATTAAAGAGCCTGGAGAGCGCACTAGGTTGTGGCGTCATGATGATATAGCTCATGTTTTAAAACAAAACACAGGAACTAGTAAAATTGAAATGATATATCTGAATTGTTCCTCAATGGAACCCATCAACATCAATGAAAAGGCCTTTAAGAAGATGAAAAAACTCAAAACACTTATCATTGAAAAGGGCTATTTTTCTAAAGGTCTCAAGTATCTTCCAAAAAGTTTGATAGTATTGAAATGGAAAGGATTTACTTCGGAGCCTCTATCATTTTGTTTTTCATTCAAGAAGAAGCTCATGAACCTGAGAATCTTGACCTTTGACTGTAGTGACTATTTAACTCATATACCTGATGTTTCAGGTCTTCCAGAATTAATAAGGCTCTCATTTCAAAATTGTAAAAATTTAACTACAATTCACAATTCAGTTGGGTACCTTTATAAACTTGAAATCTTAGATGCGACCATGTGCAGGAAGCTCAAGAGTTTTCCACCCTTATGTCTGCCGTCTCTTAAGAAATTGGAACTCCATTTTTGTAGGAGTCTCAAGAGTTTTCCAGAATTATTATGCAAGATGTCAAATATAAAAGAGATTTGGTTATGTGATACTTCCATAGAAGAAATGCCATTTTCATTTAAAAATCTCAATGAACTTCAAAAGTTAGTAATAATGGACAAAAATTTCAAAATTCTTCCCAAGTGCCTTAGTGAATGTCACTATCTTGAGCATCTTTATTTGGATTACTGTGAGTCTCTTGAGGAAATTAGAGGGATTCCACCCAATCTAACAAATCTTTATGCAGAAGGATGTAAATCATTGAGTTCCTCAAGTAGAAGAATGTTATTGAGTCAGCGACTGCACGATGCTGGTTGCAACAATATTGTTTTGCCAACCGGAACAGAGGGGATTCCAGATTGGTTCGAGCATCAAGTCAGGGGACACAACTCAATTTCTTTCTGGTTATGTAAAAAGATCCCTTCTATAACTTGTATTATTCTTATTCCGGAATTTGCGGCGATTAAAAAATTCAATTTGTTTGTCAATGGCAATGAACTTATTGGTTCTGGCTATCTTTTCGATTATAAGGGGACAGTTCTGCCGTCGGAACATGCATTTTTGTTTGATATGAATTTGGATGACCATATTGACGAGAGTTTTGGAAATAAGCCTGAACTGTACGAAGCATTTAAAAATAATGAATGGAACCATGTAGAGCTTAATTGGATCACGGAGAAGGATGATCATGTTAGTGCACAAATGGGAATCCACGTGTCATGGGAGGGGGATGTGATATTCACCGATCCTTATATTATAGAGAGAAGATATAATGAAAGAAGAGGAGAAAGAAATATTAAACAGTGGACAAGATGA 1509 0.3539 MTHHVRVLVDESLIKISAPDPYYTSYIVTLHDLIEYMGIEIVRQESIKEPGERTRLWRHDDIAHVLKQNTGTSKIEMIYLNCSSMEPININEKAFKKMKKLKTLIIEKGYFSKGLKYLPKSLIVLKWKGFTSEPLSFCFSFKKKLMNLRILTFDCSDYLTHIPDVSGLPELIRLSFQNCKNLTTIHNSVGYLYKLEILDATMCRKLKSFPPLCLPSLKKLELHFCRSLKSFPELLCKMSNIKEIWLCDTSIEEMPFSFKNLNELQKLVIMDKNFKILPKCLSECHYLEHLYLDYCESLEEIRGIPPNLTNLYAEGCKSLSSSSRRMLLSQRLHDAGCNNIVLPTGTEGIPDWFEHQVRGHNSISFWLCKKIPSITCIILIPEFAAIKKFNLFVNGNELIGSGYLFDYKGTVLPSEHAFLFDMNLDDHIDESFGNKPELYEAFKNNEWNHVELNWITEKDDHVSAQMGIHVSWEGDVIFTDPYIIERRYNERRGERNIKQWTR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1924 502 Gene3D Ribonuclease Inhibitor 57 218 IPR032675 -
Mtr6g1924 502 PANTHER ARCHAEAL ATPASE 1 454 - -
Mtr6g1924 502 SUPERFAMILY "Winged helix" DNA-binding domain 2 67 IPR036390 -
Mtr6g1924 502 Gene3D Ribonuclease Inhibitor 219 356 IPR032675 -
Mtr6g1924 502 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 454 IPR044974 GO:0006952
Mtr6g1924 502 SUPERFAMILY L domain-like 44 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1924 Mtr-Chr6 35176536 35181764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1924 6 299 WRKY Transcription Factor Family AT4G12020 34.940 1.20e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1924 - - mtr:MTR_6g074780 967.992