Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1922 ATGGCTATGCAATCACCTTCCTCTTCCACTTCAATTTCCTATGAGTACAAATACCAAGTATTCCTCAATTTCAGAGGAAGTGACACTCGGTACGGTTTCACCGGCAATCTCTACAAGGCTCTTGATGACAAGGGAATCCACACCTTCATTGACAATCATGAACTTCAAAGAGGGGATGAAATCACACCATCACTTCTCAAGGCCATTGAAGAGTCTAGGATTTTTATTGCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGGGTCGCCTCGTTCTGCCTGTTTTCTTTGCTGTGGAACCTACTATTGTGCGACATCAGAAAGGTAGTTATGGTGAAGCATTGGCTGAGCATGAAAAGAGGTTTCAAAATGATCCGAAAAGCATGGAGAGGTTGCAGGGATGGAAAGAGGCTCTGAGCCAGGCTGCTAACTTGTCCGGCTACCATGATAGTCCTCCTGGATATGAATACGAGTTTACTGGAGAGATAGTCAAATACATCTCCAACAAGATCAGTCGTCAACCCTTACATGTTGCCAATTACCCTGTTGGATTGCAGTCTCAAGTACAAGAAGTGAAATCGCTTCTTGATGAAAGATCTGATGATGGAGTCCACATGGTAGGACTTTATGGTACTGGAGGATTGGGTAAATCAACACTTGCAAAAGCAATTTATAATTTTATTGCTGATCAATTTGAATGCTCATGTTTTCTTGAAAATGTGAGAGAGAATTCAACTTCAAATAAATTGAAACATCTTCAGGAGGAGCTCCTTTTAAAAACACTTCAACTTGAAATTAAGTTTGGAGGTGTTAGTGAGGGAATTCCTTATATAAAGGAAAGGCTACATAGAAAGAAGGTTCTTTTGATTCTTGATGATGTTGACAATATGAAGCAACTACATGCTTTGGCTGGAGGACCTGATTGGTTCGGCCGTGGAAGCAAAGTCATCATTGCCACTCGAGACAAACACTTGCTAACCTGTCATGGGATAAAAAGTATGCATAAAGTGGAAGGGCTGTATGGGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAGTGACAATGTTCCTTCAGGTTACGAAGAGATTTTAAACCGTGCTGTTGCATATGCTTCTGGCCTTCCGTTAGTTATAGAAATAGTGGGTTCTAACTTGTTTGGAAAGAACATAGAGGAATGGAAGTATACATTAGATGGGTATGACAGGATTCCCAATAAAGAGATCCAAAAGATACTTAAAGTGAGCTATGATTCTTTGGAAGAAGAGGAGCAAAGTGTCTTTCTGGACATTGCTTGTTGCTTCAAAGGATATAATTGGGAAGATGCAAAGTATACACTTCATTCTCATTATGGCCATTCCATAACACATCATCTAGGAGTGTTGGCTGAAAAATCTCTCATAGACCAATATTGGGAATATCGCGATTATGTGATGTTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCAATTAAAGAGCCTGGAGAAAGAAGTAGGTTATGCTGTCAGGATGATATAGTTCGTGTTTTAAGAGAAAACACTGGAACTAGTAAAATTGAAATGATATATATGAATCTCCACTCCATGGAATCCGTGATAGACAAGAAAGGAAAGGCCTTCAAGAAGATGACAAAACTGAAAACACTTATCATTGAAAATGGCCATTTTTCTGGAGGTCTGAAGTATCTTCCAAGCAGTTTGCGTGTATTGAAATGGAAAGGATGTTTATCGAAGTGTCTGTCATCTAATATTTTAAACAAGAAGTTTCAGAATATGAAAGTCTTGACATTGAACTATTGTGAATATTTAACACATATACCCGATGTCTCAGGCCTTTCAAATTTAGAAAAGTTATCGTTTACATGTTGTGATAATTTAATTACAATTCACAATTCTATTGGACACCTAAATAAACTTGAATGGTTAAGTGCATATGGTTGCAGAAAGCTCGAACGTTTTCCACCTTTAGGTTTGGCATCTCTTAAGAAATTGAATCTCAGTGGTTGTGAGAGTCTCGATAGTTTTCCAGAATTATTATGCAAGATGACAAAGATAGACAATATTTTGTTGATTAGTACTTCCATAAGAGAACTGCCATTTTCATTTCAAAATCTCAGTGAACTTCAAGAGTTATCAGTGGCAAATGGAACGCTGAGGTTCCCAAAACAGAATGATAAGATGTATTCAATAGTGTTTTCAAATATGACAGAGCTTACTCTCATGGATTGCAACCTCTCAGATGAATGTCTCCCAATACTTCTCAAGTGGTTTGTTAATGTGACATGTCTAGACTTATCATATAGCAATTTCAAAATTCTTCCTGAGTGCCTTAGTGAATGTCACCATCTTGTTCTAATTACTGTGAGGGACTGCGAGTCCCTTGAGGAAATTAGAGGGATTCCACCAAATCTTAAATGGCTTTCTGCAAGCGAATGCAAATCATTGAGTTCCTCAAGTAAAAGAAAGTTAATGAGTCAGAAACTACATGAGGCTGGATGCACCTATTTTGAATTCCCAAACGGAACAGAGCAGGGGATACCAGATTGGTTTGAGCACCAAAGCAGGGGACTCACACTTTCTTTCTGGTTTCGTAAAGAAATCCCTTCAATAACTTGTATATTTATTCTTCCGGAAGGCTTTCTTGATACCAATAGGGTCTATGTTTTTGTGAATGGTTATATTGAGACAGAATATTGCCACAATAGTTTGCTGACTGACCATACAACTTTGTTTCATACCTCGAAATTGAATAGATTCAGTAAAAGACAATGCGAGAAAGAACTTTTGAAAAATGAATGGATCCATGTGGAGTTTAAGTTGGATGATTGGGATTTTAAAATACTTAGTGAGGAAGAGAAGAATAAAAGATTAAGGAGTGGTCAAATGGGAATCCACGTGTGGAATGAGAAAAGCAACACAGAGGAGAAGAATGTGGTATTCACTGATCCTTATATTAGAAAGAGAAAATCAGATGAACATCGCAATGCTTCGTTATTACAATTTCACCCACCGCTGAAAAAGCAAAGGTTAGTGAAAAAGCAACAACATCTAGCTTTAGTGTCAGCCATGCGGAACTTGGTTCTTAATGAAACAAAAGAATTGGAACACCATGGCTAG 3186 0.3817 MAMQSPSSSTSISYEYKYQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSLLKAIEESRIFIAVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEALAEHEKRFQNDPKSMERLQGWKEALSQAANLSGYHDSPPGYEYEFTGEIVKYISNKISRQPLHVANYPVGLQSQVQEVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVRENSTSNKLKHLQEELLLKTLQLEIKFGGVSEGIPYIKERLHRKKVLLILDDVDNMKQLHALAGGPDWFGRGSKVIIATRDKHLLTCHGIKSMHKVEGLYGTEALELLRWMAFKSDNVPSGYEEILNRAVAYASGLPLVIEIVGSNLFGKNIEEWKYTLDGYDRIPNKEIQKILKVSYDSLEEEEQSVFLDIACCFKGYNWEDAKYTLHSHYGHSITHHLGVLAEKSLIDQYWEYRDYVMLHDLIEDMGKEVVRQESIKEPGERSRLCCQDDIVRVLRENTGTSKIEMIYMNLHSMESVIDKKGKAFKKMTKLKTLIIENGHFSGGLKYLPSSLRVLKWKGCLSKCLSSNILNKKFQNMKVLTLNYCEYLTHIPDVSGLSNLEKLSFTCCDNLITIHNSIGHLNKLEWLSAYGCRKLERFPPLGLASLKKLNLSGCESLDSFPELLCKMTKIDNILLISTSIRELPFSFQNLSELQELSVANGTLRFPKQNDKMYSIVFSNMTELTLMDCNLSDECLPILLKWFVNVTCLDLSYSNFKILPECLSECHHLVLITVRDCESLEEIRGIPPNLKWLSASECKSLSSSSKRKLMSQKLHEAGCTYFEFPNGTEQGIPDWFEHQSRGLTLSFWFRKEIPSITCIFILPEGFLDTNRVYVFVNGYIETEYCHNSLLTDHTTLFHTSKLNRFSKRQCEKELLKNEWIHVEFKLDDWDFKILSEEEKNKRLRSGQMGIHVWNEKSNTEEKNVVFTDPYIRKRKSDEHRNASLLQFHPPLKKQRLVKKQQHLALVSAMRNLVLNETKELEHHG* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1922 1061 SUPERFAMILY L domain-like 554 844 - -
Mtr6g1922 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 448 IPR027417 -
Mtr6g1922 1061 Gene3D - 14 183 IPR035897 -
Mtr6g1922 1061 Gene3D Ribonuclease Inhibitor 536 738 IPR032675 -
Mtr6g1922 1061 Pfam TIR domain 17 186 IPR000157 GO:0007165
Mtr6g1922 1061 Pfam NB-ARC domain 202 438 IPR002182 GO:0043531
Mtr6g1922 1061 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1922 1061 Gene3D - 355 438 IPR042197 -
Mtr6g1922 1061 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 163 IPR035897 -
Mtr6g1922 1061 CDD AAA 198 335 - -
Mtr6g1922 1061 PRINTS Disease resistance protein signature 221 236 - -
Mtr6g1922 1061 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g1922 1061 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g1922 1061 PRINTS Disease resistance protein signature 679 695 - -
Mtr6g1922 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 963 IPR044974 GO:0006952
Mtr6g1922 1061 SUPERFAMILY "Winged helix" DNA-binding domain 424 533 IPR036390 -
Mtr6g1922 1061 PANTHER ARCHAEAL ATPASE 28 963 - -
Mtr6g1922 1061 Gene3D Ribonuclease Inhibitor 749 855 IPR032675 -
Mtr6g1922 1061 Gene3D - 184 348 IPR027417 -
Mtr6g1922 1061 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1922 Mtr-Chr6 35123055 35194940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1922 18 801 WRKY Transcription Factor Family AT4G12020 28.193 1.65e-66 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1922 - - mtr:MTR_6g071935 1313.9