Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1921 ATGGTAGTAAATGTGACAATTAAAAAGGAACGGAGATATGAATACGAGCTTATTGGAAAGATAGTGAAAGAAATCTCCAACAAGATCAGTCGTCAGCCCTTACATGTTGCCAATTATCCTATTGGATTGCAGTCTCGAGTACAACAAGTGAAATCTCTTCTTGATGAAAGATCTGATGATGGAGTCCACATGGTAGGACTTTATGGTACTGGAGGATTGGGTAAATCAACACTTGCAAAAGCAATTTATAATTTTATTGCTGATCAATTTGAATGCTCATGTTTTCTTGAAAATGTGAGAGAGAATTCAGCTTCAAATAAATTGAAACATCTCCAGGAGGAGCTCCTTTTAAAAACACTTCAACTTGAAATTAAGTTAGGAGGTGTTAGTGAGGGAATTTCTCATATAAAGGAAAGGCTGCATTCAATGAAGATTCTTTTGATTCTCGATGATGTTGACGATATGGGGCAACTACAGGCTTTGGCAGGAGAACCTGATTGGTTTGGGCTTGGAAGCAGGGTCATCATTACCACTCGAGACAGACACTTACTAACCAGTCATGATATAGAAAGAAAGTATGCATTAGAAGGGTTGTGTAGGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAGAATAACAAAGTACCTTCAGTTTATGAAGACGTTTTAAACCGTGCAGTTTCATATGCTTCAGGACTTCCCTTAGTTTTGGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGGATAGAAGAATGGAAGGGTACGTTAGAAGGATATGAGAAGATTCCCAATAAAAAGATCCACGAGATTCTTAAAGTAAGCTATGATGCTTTGGAGGAAGAGCAGCAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGATGTGGATTGGAAGTGGTTGAAGATATACTTCGTGCTCATTATGGCCATTGCATAACACATCATCTAGGAGTGTTGGCTGAAAAATCTCTTGTTCAGATTTGTACTTACCATTCTGGATCTATTTATAAAGTGACACTGCATAACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCACCTAAAGAGCCTGGAGAAAGAAGTAGGTTATGGTGTCAAGACGATATAGTTCATGTTCTAACAGAAAACACTGGAACTAGGAACATTGAAATGATACATTTGAATTGTCCCTCAATGGAAAACGTAATAGAGTGGAATGGAAAGGCCATGAAGAAGATGACAAATCTCAAAACACTTATCATTGAAAATGGTCAGTTTTCTAGAGGTCCTGACTATCTTCCAAGTAGTTTGAGATTTTGCAAATGGAATGGTTGTCCTTCGAAGTCTCTATCATCTTGTATTTTGAACAAGAAGTTCAACTATATGAAAGTATTGAAATTGAACAGTTGTCAATATTTAACCCAAATACCCGATGTCTCAGGACTTCCAAATTTAGAAAAGTTATCGTTTCAATTTTGTGAGAATTTAATTACAATTCACAATTCAGTTGGATTCCTAAACAGACTTGAAATCTTAGATGCAAAATATTGCATCAAGCTCCAGAGTGTTCCACCTTTACAACTGCCCTGTCTTAAGAGATTGGAACTCGCCATGTGTAAGAGTCTCAAGAGTTTTCCAGAATTATTATGCAAGATGACAAATTTAAAAGATATTTGGTTGAATGAAACTTGCATGGAATTTCCATTTTCAATTCAAAATCTCAGTGAACTTGATCGCTTACAAATATATCAATGTGGAATGCTCAGGTTCCCAAAACAAAATGATAAAATGAATTCTATAGTATTTTCAAATGTGAACCATCTTAGAATTGAAAAGAGCAACCTCTCAGATGAATTTCTCCGAATACTTCTAATGTGGTGTGTTAATGTGGAAAATCTAGTCTTATCTGAGAGCAATTTCAAAATTCTTCCTGAGTGCCTTAGTGAATGTCACCTTCTTAAAAACATTTATGTGGATGGCTGCAAGTTTCTTGAGGAAATTAGAGGGTTTCCACCAAATCTTAAAATATTTCATGCAAAGGACTGTGAATCATTGAGTTCCTCAAGTAGAAGAATGTTATTGAGTCAGCAACTACACAAGGCTGGACACACGGATTTTTATTTTCCAACTGGAAGTGAGGGGATTCCAAATTGGTTCGAGTATCAAATCAAGGTTAACGAACCAATTTCTTTCTCTTTTCATGGAAAGATCCCTTGTATAACTTGTATTATTCTTAATCCAGAATCTGTGGAGATTCCACAAGTCAATTTGTTTCTAAATGGTGATGAATGTCCTCTTCATTGGGAATTAAACTATGAAAATGTACTTCTGCCGTCGAAACATACATTTTTGTTTGATCTGGGATTAAAATCACGTATTTACGACAATTTTAACCATATGCCTGAAATGATACGAACAATTAAAAAAAATGAATTGAATCATGTGGAGATTGATTGGGAGAAAGATGATTTACATCTCAGTGAGGATGAGATTAAAAAATTAAGGAGATTACAAATGGGAATCCACGTGTCGTGGACGGAGGAAACCGACACAGAGGAGGAAATCGACACGGAGGAGGATGATTTTAGTGATGATGAGATATTCACTGAAAGCAGTTCACAAATGGTAATCCACTACCAGGAGAAAAGCAACACGGAGCAAATCGACACGGAGGAGGATGATTTCTACCGTAGTGCACAAATGGGAATCCATGTGGTGAAGGAGAAAAGCAACATAAAGGATCATGATTTAAGTGAGGATGAGATATTCGTGCCTGATGAGATTAAAAAATTAAGCAGCGCACAAATCGGAATCCACGAGAAAAGCAACACTGAGGATGTGATATTCACCAATCCTAATAGAACAACTACAACAACCAAGCCTTATTATTCCCAAGCCTTATTCCCCAATCCTCCTAGAAAGATAAGGAAATTTCGTCCTACACTTAAAAAACAAAGGTTTGTGGAAGTTTCAAAGACAGAAAGTTTGCAGAGGCGGAGCTTGGAAGAAACAAAATCAGATGGAGTTAAAAGCTTGGAAGTTTCGGAGACAGAAAGTTTGCAGCAGCAGTATCTAGCTGTAGTGTCCGGCATGCGGAACTTGGTGCTTACTGAAACAAAAGAAAAGCATAGATTTGTGGAAGTGGGAGTTTCAGAGACAGAAACTGCGCATAGGTGGAGCTTGGAAGAAACAAAATCAGATGGAGTAAAAAGGTTCGAAGTTTCAGAGACAGAAAGTTTGCAGCAGCAAGATCTAGCTTTATTGTCATCAGGCATGCAGAACATGGTGCTTACAGACAAAAAAGAAAAGGAAAACAACATGACTAGCATGCAAGAGGTTTACAGTGAGCTAAATGGATTGGATTTGGAAGGTCATATACAAAAAATTTGTCAGGTCGAAACGACTATGGTTGGACGGGTTTATCAAACTTAA 3429 0.3742 MVVNVTIKKERRYEYELIGKIVKEISNKISRQPLHVANYPIGLQSRVQQVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVRENSASNKLKHLQEELLLKTLQLEIKLGGVSEGISHIKERLHSMKILLILDDVDDMGQLQALAGEPDWFGLGSRVIITTRDRHLLTSHDIERKYALEGLCRTEALELLRWMAFKNNKVPSVYEDVLNRAVSYASGLPLVLEVVGSNLFGKRIEEWKGTLEGYEKIPNKKIHEILKVSYDALEEEQQSVFLDIACCFKGCGLEVVEDILRAHYGHCITHHLGVLAEKSLVQICTYHSGSIYKVTLHNLIEDMGKEVVRQESPKEPGERSRLWCQDDIVHVLTENTGTRNIEMIHLNCPSMENVIEWNGKAMKKMTNLKTLIIENGQFSRGPDYLPSSLRFCKWNGCPSKSLSSCILNKKFNYMKVLKLNSCQYLTQIPDVSGLPNLEKLSFQFCENLITIHNSVGFLNRLEILDAKYCIKLQSVPPLQLPCLKRLELAMCKSLKSFPELLCKMTNLKDIWLNETCMEFPFSIQNLSELDRLQIYQCGMLRFPKQNDKMNSIVFSNVNHLRIEKSNLSDEFLRILLMWCVNVENLVLSESNFKILPECLSECHLLKNIYVDGCKFLEEIRGFPPNLKIFHAKDCESLSSSSRRMLLSQQLHKAGHTDFYFPTGSEGIPNWFEYQIKVNEPISFSFHGKIPCITCIILNPESVEIPQVNLFLNGDECPLHWELNYENVLLPSKHTFLFDLGLKSRIYDNFNHMPEMIRTIKKNELNHVEIDWEKDDLHLSEDEIKKLRRLQMGIHVSWTEETDTEEEIDTEEDDFSDDEIFTESSSQMVIHYQEKSNTEQIDTEEDDFYRSAQMGIHVVKEKSNIKDHDLSEDEIFVPDEIKKLSSAQIGIHEKSNTEDVIFTNPNRTTTTTKPYYSQALFPNPPRKIRKFRPTLKKQRFVEVSKTESLQRRSLEETKSDGVKSLEVSETESLQQQYLAVVSGMRNLVLTETKEKHRFVEVGVSETETAHRWSLEETKSDGVKRFEVSETESLQQQDLALLSSGMQNMVLTDKKEKENNMTSMQEVYSELNGLDLEGHIQKICQVETTMVGRVYQT* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1921 1142 PRINTS Disease resistance protein signature 64 79 - -
Mtr6g1921 1142 PRINTS Disease resistance protein signature 139 153 - -
Mtr6g1921 1142 PRINTS Disease resistance protein signature 232 246 - -
Mtr6g1921 1142 PRINTS Disease resistance protein signature 525 541 - -
Mtr6g1921 1142 Gene3D - 198 281 IPR042197 -
Mtr6g1921 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 291 IPR027417 -
Mtr6g1921 1142 SUPERFAMILY "Winged helix" DNA-binding domain 267 379 IPR036390 -
Mtr6g1921 1142 PANTHER ARCHAEAL ATPASE 11 818 - -
Mtr6g1921 1142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 818 IPR044974 GO:0006952
Mtr6g1921 1142 Pfam NB-ARC domain 45 279 IPR002182 GO:0043531
Mtr6g1921 1142 CDD AAA 41 196 - -
Mtr6g1921 1142 SUPERFAMILY L domain-like 396 697 - -
Mtr6g1921 1142 Gene3D Ribonuclease Inhibitor 353 703 IPR032675 -
Mtr6g1921 1142 Gene3D - 22 192 IPR027417 -
Mtr6g1921 1142 SMART AAA_5 61 195 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1921 Mtr-Chr6 35116391 35122952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1921 15 581 WRKY Transcription Factor Family AT4G12020 30.407 8.95e-57 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1921 - - mtr:MTR_6g074650 2196.39