Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1917 ATGGCTACGCAATCACCTTCCTCATTCACTTACCAAGTGTTCCTCAGTTTTAGGGGCGCGGACACTCGCCACGGTTTTACCGGAAATCTCTACAAGGCTCTTACTGACAAGGGAATCTATACCTTCATTGATGACAATGATCTTCAAAGAGGAGATGAAATCACACCATCACTAAAAAATGCCATTGAAAAATCTAGGATTTTTATTCCCGTATTTTCTGAAAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTTCACATCACTCATTGCTACGATACAAAGGGTTGTCTTGTTTTGCCTGTTTTTATTGGTGTGGATCCTACTGATGTGCGACATCACACAGGTAGATATGGTGAAGCATTAGCTGTGCATAAAAAAAAGTTTCAAAATGATAAGGATAACACTGAGAGGTTGCAGCAATGGAAAGAAGCTCTGAGCCAAGCGGCTAACTTGTCTGGCCAGCATTATAAACATGGATATGAATACGAGTTTATTGGAAAGATAGTCGAAGACATTTCCAACAGGATTAGTCGTGAGCCCTTAGATGTTGCCAAATATCCTGTTGGATTACAGTCCCGAGTACAACATGTGAAAGGGCATCTTGATGAAAAATCTGATGATGAGGTCCACATGGTAGGACTTTATGGTACTGGAGGCATAGGTAAATCAACACTTGCAAAAGCAATTTATAATTTCATTGCTGATCAATTTGAAGTTTTATGTTTTCTAGAAAATGTGAGAGTGAATTCGACTTCAGATAACTTGAAACATCTCCAAGAGAAACTCCTTTTAAAAACAGTTAGATTGGACATTAAGTTAGGAGGTGTTAGTCAGGGAATTCCAATCATTAAGCAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAACTGGATCAGCTAGAGGCCTTGGCTGGAGGACTTGATTGGTTCGGTCCTGGGAGTAGAGTCATCATTACTACTCGAAACAAACACTTACTAAAGATTCATGGGATAGAAAGTACACATGCAGTAGAAGGGTTGAATGCGACAGAAGCTCTCGAATTGTTGAGGTGGATGGCTTTCAAAGAAAATGTTCCTTCAAGTCATGAAGACATTTTAAACCGTGCACTTACTTATGCTTCTGGCCTTCCATTAGCTATTGTAATAATAGGGTCCAATTTGGTTGGAAGGAGCGTACAAGATTCAATGAGTACATTAGATGGGTATGAAGAAATTCCCAATAAAGAGATCCAAAGAATACTTAAAGTGAGCTATGATTCTTTGGAGAAAGAAGAGCAAAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGGTGTAAATGGCCAGAGGTCAAAGAAATACTTCATGCTCATTATGGTCATTGCATAGTACATCATGTTGCAGTTTTGGCTGAAAAATCTCTCATGGACCATTTGAAATATGATAGTTATGTGACATTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCACCCGATGAGCCTGGAGAACGCAGTAGGTTGTGGTTTGAGCGTGATATAGTTCATGTTTTAAAAAAAAACACTGGAACAAGGAAAATCAAAATGATAAATATGAAATTCCCCTCCATGGAATCTGATATTGATTGGAATGGAAATGCCTTCGAGAAGATGACAAACCTCAAAACATTTATTACTGAAAATGGCCATCATTCTAAAAGTCTCGAGTATCTTCCAAGTAGTTTGAGGGTAATGAAAGGATGTATTCCGAAGTCTCCATCATCTAGTAGTTCGAACAAGAAGTTTGAAGATATGAAAGTCTTGATATTGAACAATTGTGAATATTTAACCCATATACCGGATGTCTCAGGGCTTCCAAATTTAGAAAAGTTCTCGTTTGTAAGATGTCATAATTTAGTTACAATTCACAATTCACTTAGATACCTAAATAGATTAGAAATCTTAAATGCAGAGGGTTGCGAGAAGCTCGAGAGTTTTCCACCCTTACAGTCTCCCTCTCTTCAGAATCTGGAACTCTCTAATTGTAAGAGTCTCAAGAGTTTTCCAGAATTATTATGCAAGATGACAAATATAAAATCTATCTTGTTGAAGGAAACTTCCATAGAAAAATTTCAATCTTCCTTTCAAAATCTTAGTGAACTTAGTCATTTAACAATATCAAGTGCCAATTTAAAAATTAACCTCCTTAAGATCCTTAGATTGGATGAATGCAAGTGTTTTGAGGAAAATCGAGCTATTACACTGAATCCAGAAAAGCTTTCTGGATTTCAATGCAAACTAGGGCACAAAAGCAAGGGACACACAATTTCTTTCTGGTTTCGTAAAAAGATCCCTTCTAGAGCAATTATTCTTCTTCTTTGTTTGTCAATGGGTATAAATATACTCTTTTTGACAAAGCACTTTGCAGTGTGGGAAACTCGTGCCTAA 2442 0.3735 MATQSPSSFTYQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIPVFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKFQNDKDNTERLQQWKEALSQAANLSGQHYKHGYEYEFIGKIVEDISNRISREPLDVAKYPVGLQSRVQHVKGHLDEKSDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVRVNSTSDNLKHLQEKLLLKTVRLDIKLGGVSQGIPIIKQRLCRKKILLILDDVDKLDQLEALAGGLDWFGPGSRVIITTRNKHLLKIHGIESTHAVEGLNATEALELLRWMAFKENVPSSHEDILNRALTYASGLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVSYDSLEKEEQSVFLDIACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSYVTLHDLIEDMGKEVVRQESPDEPGERSRLWFERDIVHVLKKNTGTRKIKMINMKFPSMESDIDWNGNAFEKMTNLKTFITENGHHSKSLEYLPSSLRVMKGCIPKSPSSSSSNKKFEDMKVLILNNCEYLTHIPDVSGLPNLEKFSFVRCHNLVTIHNSLRYLNRLEILNAEGCEKLESFPPLQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIEKFQSSFQNLSELSHLTISSANLKINLLKILRLDECKCFEENRAITLNPEKLSGFQCKLGHKSKGHTISFWFRKKIPSRAIILLLCLSMGINILFLTKHFAVWETRA* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1917 813 ProSiteProfiles TIR domain profile. 9 178 IPR000157 GO:0007165
Mtr6g1917 813 SUPERFAMILY L domain-like 538 742 - -
Mtr6g1917 813 Gene3D - 346 429 IPR042197 -
Mtr6g1917 813 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Mtr6g1917 813 CDD AAA 216 329 - -
Mtr6g1917 813 Pfam TIR domain 11 178 IPR000157 GO:0007165
Mtr6g1917 813 PANTHER ARCHAEAL ATPASE 21 754 - -
Mtr6g1917 813 SMART AAA_5 210 350 IPR003593 -
Mtr6g1917 813 Pfam NB-ARC domain 194 426 IPR002182 GO:0043531
Mtr6g1917 813 Gene3D Ribonuclease Inhibitor 494 780 IPR032675 -
Mtr6g1917 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 439 IPR027417 -
Mtr6g1917 813 SUPERFAMILY "Winged helix" DNA-binding domain 415 524 IPR036390 -
Mtr6g1917 813 PRINTS Disease resistance protein signature 213 228 - -
Mtr6g1917 813 PRINTS Disease resistance protein signature 288 302 - -
Mtr6g1917 813 PRINTS Disease resistance protein signature 380 394 - -
Mtr6g1917 813 PRINTS Disease resistance protein signature 667 683 - -
Mtr6g1917 813 Gene3D - 8 179 IPR035897 -
Mtr6g1917 813 Gene3D - 180 340 IPR027417 -
Mtr6g1917 813 SMART till_3 10 153 IPR000157 GO:0007165
Mtr6g1917 813 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 754 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1917 Mtr-Chr6 35039498 35042761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1917 7 740 WRKY Transcription Factor Family AT4G12020 28.121 1.24e-62 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1917 - - mtr:MTR_6g074090 1151.35