Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1916 ATGGCCATGCAATTACCTTTCTATTCCTCTTCATTTTCCTATGCATTCAGTTACGATGTGTTCCTCATTTGTAAGGGCACCGACACTCGGTACGGTTTCACCGGCAATCTCTTGAAGGCTCTTATTGACAAGGGAATTCGTACCTTCCATGATGACGATGACAGTGATCTTCAAAGAAGAGACAAAGTCACACCAATCATTATTGAAGAATCCAGGATTTTGATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTGTCCACATCATTCACTGCTACAAAACCAAGGGTTGCCTCGTTTTGCCTGTTTTCTTTGGTGTGGAACCTACTGATGTGCGACATCATACAGGTAGGTATGGTAAAGCATTGGCTGAGCATGAAAATAGGTTTCAAAATGATACGAAAAACATGGAGAGGTTGCAGCAATGGAAAGTGGCTCTGAGTCTGGCTGCTAACTTGCCCAGCTACCATGATGATAGTCATGGATATGAATACGAGCTTATTGGAAAGATAGTCAAATACATCTCCAACAAGATCAGTCGACAGTCCTTACATGTTGCCACTTACCCTGTTGGATTGCAGTCTCGAGTACAACAAGTGAAATCGCTTCTTGATGAGGGACCTGATGATGGGGTCCATATGGTTGGAATTTATGGGATTGGAGGCTCAGGTAAATCAACACTTGCAAGAGCAATCTATAATTTTGTTGCTGATCAATTTGAAGGTTTATGTTTTCTTGAACAAGTCAGAGAGAATTCAGCTTCAAATAGCTTGAAACGTTTCCAGGAGATGCTCCTTTCAAAGACACTTCAACTGAAAATTAAGTTAGCAGATGTCAGTGAGGGAATCTCAATCATAAAGGAAAGGTTGTGTAGAAAGAAGATTCTTTTGATTCTCGATGACGTTGACAATATGAAGCAACTGAATGCTTTGGCTGGAGGAGTTGATTGGTTCGGTCCTGGAAGCCGAGTCATCATCACCACCCGAGATAAACACTTACTAGCCTGTCATGAGATAGAAAAAACATATGCAGTAAAAGGGTTGAATGTGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAATGACAAAGTTCCTTCAAGTTATGAAAAGATTTTGAATCGTGTAGTTGCTTATGCTTCTGGCCTTCCGGTAGTTATAGAAATAGTGGGTTCTAACTTGTTTGGAAAGAACATAGAAGAATGCAAGAATACATTAGATTGGTATGAAAAGATTCCCAATAAAGAGATCCAAAGAATACTTAAAGTGAGCTATGATTCTTTGGAGGAAGAGGAGCAAAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGTTGTAAATGGGAAAAGGTCAAAGAAATACTTCATGCTCATTATGGTCATTGCATAAATCATCATGTTGAAGTGCTAGTTGAAAAATGTCTCATTGACCATTTTGAATACGATAGTCATGTGTCATTACATAACTTGATAGAGAACATGGGTAAAGAACTCGTCCGACTAGAATCACCTTTTGAGCCTGGAAAAAGAAGCAGGTTATGGTTTGAAAAGGATATATTTGAAGTTCTAGAAGAAAACACTGGAACCAGTAAAATTGAAATGATATATATGAATTTGCACTCTATGGAATCCGTAATAGACAAGAATGGAAAGGCCTTCAAGAAGATGACACACCTCAAAACGTTTATTACTGAAAATGGCTATCATATTCAAAGTCTCAAGTATCTTCCAAGAAGTTTGAGGGTAATGAAAGGATGTATTCTGAGGTCTCCATCATCTAGTAGTTTGAATAAGAAGCTTGAGAATATGAAAGTGTTGATATTCGACAATTGTCAAGATTTAATCTATACACCCGATGTCTCATGGCTTCCAAATTTAGAAAAGTTCTCGTTTGCAAGATGTCATAATTTAGTTACAATTCACAATTCACTTAGATACCTAAATAGATTAGAAATCTTAAATGCAGAGGGTTGCGAGAAGCTCGAGAGTTTTCCACCCTTACAGTCTCCCTCTCTTCAGAATTTGGAACTCTCTAATTGTAAGAGTCTCAAGAGTTTTCCAGAATTATTATGCAAGATGACAAATATAAAATCTATCTTGTTGAAGGAAACTTCCATAGGAGAATTTCCATTTTCCTTTCAAAATCTTAGTGAACTTCGTCACTTAACAATATCAGGTGACAATTTAAAAATTAACCTTCTTAGGATCCTTAGATTGGATGAATGCAAGTGTTTTGAGGAAGATCGAGGGATTCCATCGAATCTAGAAAAGTTTTCTGGATTTCAATGCAAATCAAGGCACAGAAGCAAGGGACACACCATTTCTTTCTGGTTTCGTAAAAAGATCCCTTTTAGAACAATTATTATTATTCTTCTTTGTTTGTCAATGGCTATAAATATACTCTTTTTGACAAAGCACTTTGTAGTGTGGGAAACTTGTGCCTAA 2469 0.3751 MAMQLPFYSSSFSYAFSYDVFLICKGTDTRYGFTGNLLKALIDKGIRTFHDDDDSDLQRRDKVTPIIIEESRILIPIFSANYASSSSCLDTLVHIIHCYKTKGCLVLPVFFGVEPTDVRHHTGRYGKALAEHENRFQNDTKNMERLQQWKVALSLAANLPSYHDDSHGYEYELIGKIVKYISNKISRQSLHVATYPVGLQSRVQQVKSLLDEGPDDGVHMVGIYGIGGSGKSTLARAIYNFVADQFEGLCFLEQVRENSASNSLKRFQEMLLSKTLQLKIKLADVSEGISIIKERLCRKKILLILDDVDNMKQLNALAGGVDWFGPGSRVIITTRDKHLLACHEIEKTYAVKGLNVTEALELLRWMAFKNDKVPSSYEKILNRVVAYASGLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEIQRILKVSYDSLEEEEQSVFLDIACCFKGCKWEKVKEILHAHYGHCINHHVEVLVEKCLIDHFEYDSHVSLHNLIENMGKELVRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIYMNLHSMESVIDKNGKAFKKMTHLKTFITENGYHIQSLKYLPRSLRVMKGCILRSPSSSSLNKKLENMKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCEKLESFPPLQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIGEFPFSFQNLSELRHLTISGDNLKINLLRILRLDECKCFEEDRGIPSNLEKFSGFQCKSRHRSKGHTISFWFRKKIPFRTIIIILLCLSMAINILFLTKHFVVWETCA* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1916 822 PANTHER ARCHAEAL ATPASE 28 781 - -
Mtr6g1916 822 Pfam TIR domain 18 185 IPR000157 GO:0007165
Mtr6g1916 822 Gene3D - 353 437 IPR042197 -
Mtr6g1916 822 Gene3D - 13 182 IPR035897 -
Mtr6g1916 822 Pfam NB-ARC domain 201 434 IPR002182 GO:0043531
Mtr6g1916 822 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 781 IPR044974 GO:0006952
Mtr6g1916 822 PRINTS Disease resistance protein signature 220 235 - -
Mtr6g1916 822 PRINTS Disease resistance protein signature 295 309 - -
Mtr6g1916 822 PRINTS Disease resistance protein signature 388 402 - -
Mtr6g1916 822 PRINTS Disease resistance protein signature 675 691 - -
Mtr6g1916 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 447 IPR027417 -
Mtr6g1916 822 SMART till_3 17 159 IPR000157 GO:0007165
Mtr6g1916 822 Gene3D - 183 348 IPR027417 -
Mtr6g1916 822 CDD AAA 197 336 - -
Mtr6g1916 822 Gene3D Ribonuclease Inhibitor 523 788 IPR032675 -
Mtr6g1916 822 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr6g1916 822 SUPERFAMILY L domain-like 553 767 - -
Mtr6g1916 822 SUPERFAMILY "Winged helix" DNA-binding domain 423 532 IPR036390 -
Mtr6g1916 822 SMART AAA_5 217 351 IPR003593 -
Mtr6g1916 822 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1916 Mtr-Chr6 34920187 34926070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1916 12 732 WRKY Transcription Factor Family AT4G12020 28.299 3.44e-62 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1916 - - mtr:MTR_6g074090 1599.72