Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1915 ATGGCTATGCAATCACTTTCCTCTTCCTCTTCAATTTCCTCTGGGTTCAAATACCATGTGTTCCTCAGTTTTAGGGACATTGACACTCTTTACGGTTTTACCGGCAATCTCTACAAGGCTCTTATTGACAAGGGAATCAAAACCTTCATTGATGACAACGATCTTGAAAGAGGAGATGAAAGCACACCATCACTTGTCAAGGCCATTGAAGAGTCTAGGATTTTGATTCCCATATTTTCTGCAAACTATGCATCTTCTTCATTTTGCTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAGGGGTTGTTCGGTTTTGCCTGTTTTCTATGGTGCGGATCCTACTCACGTACGACATCAGACTGGGAGTTATGGTGAGCATCTTACTAAGCATGAAGATAAGTTCCAAAATAACAAGGAAAACATGGAGAGGTTGAAGAAATGGAAGATGGCTCTTACCCAAGCTGCTAACTTCTCCGGCCACCATTTTAGTCAAGGATATGAGTACGAGCTTATTGAGAATATAGTCGAACACATTTCCGATAGGATCAATCGTGTTTTTCTACACGTTGCCAAATACCCTGTTGGATTACAGTCCCGAGTACAACAAGTAAAATTGCTTCTTGATGAGGAATCTGATGAAGGGGTCAACATGGTAGGACTTTATGGTACTAGAGGCTTGGGAAAATCAACACTTGCAAAAGCAATTTATAATTTCATTGCTGATCAATTTGAAGGAGTATGCTTTCTTCATAATGTTAGAGAGAATTCAGCTCGTAAAAACTTGAAACATCTCCAGAAGGAGCTCCTTTCAAAAACAGTTCAACTGAACATTAAGTTAAGAGATGTTTCTGAGGGAATTCCAATCATTAAGGAAAGGCTATGTAGGAAGAAGATTCTTTTGATTCTCGATGATGTTGACCAACTGGATCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTCCTGGAAGCAGAGTCATCATCACCACCCGAGATAAACACTTACTAACCTGTCATGGGATAGAAAGAACATATGCAGTAAGAGGGCTATATGGGAAGGAAGCTCTTGAATTGTTGAGGTGGACGGCTTTTAAGAATAACAAAGTACCGCCAAGTTATGAAGATGTTTTAAACCGTGCAGTTTCATATGGTTCGGGCATTCCCTTAGTTTTAGAAATAGTGGGTTCTAACTTGTTTGGAAAGAACATAGAAGTATGGAAGAACACATTAGATGGGTATGACAGGATTCCCAATAAAGAGATACAAAAGATACTTAGAGGAGCAAAATGTATTTCTTGA 1311 0.3997 MAMQSLSSSSSISSGFKYHVFLSFRDIDTLYGFTGNLYKALIDKGIKTFIDDNDLERGDESTPSLVKAIEESRILIPIFSANYASSSFCLDELVHIIHCYKTRGCSVLPVFYGADPTHVRHQTGSYGEHLTKHEDKFQNNKENMERLKKWKMALTQAANFSGHHFSQGYEYELIENIVEHISDRINRVFLHVAKYPVGLQSRVQQVKLLLDEESDEGVNMVGLYGTRGLGKSTLAKAIYNFIADQFEGVCFLHNVRENSARKNLKHLQKELLSKTVQLNIKLRDVSEGIPIIKERLCRKKILLILDDVDQLDQLEALAGGLDWFGPGSRVIITTRDKHLLTCHGIERTYAVRGLYGKEALELLRWTAFKNNKVPPSYEDVLNRAVSYGSGIPLVLEIVGSNLFGKNIEVWKNTLDGYDRIPNKEIQKILRGAKCIS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1915 436 PRINTS Disease resistance protein signature 220 235 - -
Mtr6g1915 436 PRINTS Disease resistance protein signature 295 309 - -
Mtr6g1915 436 PRINTS Disease resistance protein signature 388 402 - -
Mtr6g1915 436 SMART AAA_5 217 354 IPR003593 -
Mtr6g1915 436 Gene3D - 15 186 IPR035897 -
Mtr6g1915 436 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 430 IPR044974 GO:0006952
Mtr6g1915 436 Gene3D - 354 432 IPR042197 -
Mtr6g1915 436 CDD AAA 197 336 - -
Mtr6g1915 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 430 IPR027417 -
Mtr6g1915 436 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr6g1915 436 PANTHER ARCHAEAL ATPASE 30 430 - -
Mtr6g1915 436 Pfam NB-ARC domain 201 414 IPR002182 GO:0043531
Mtr6g1915 436 Pfam TIR domain 17 184 IPR000157 GO:0007165
Mtr6g1915 436 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1915 436 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Mtr6g1915 436 Gene3D - 187 346 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1915 Mtr-Chr6 34894982 34897228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1915 12 400 WRKY Transcription Factor Family AT4G12020 26.570 1.38e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1915 - - mtr:MTR_6g071935 689.493