Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1914 ATGGCTATGCAACCACCTTCTTCTACTTCTTCCTCCGGCCTCTCTAATAATTTCAGCTATGACGTGTTCATTAGTTTCAGGGGTACCGACACTCGACACGGTTTCACCGGTAATCTCTATAAAGCTCTTTGTGACAAAGGAATCCGAACCTTCATTGATGACAAGGAGCTTCAGAGAGGTGACGAAATCACATCTTCGCTCCACAAGAAAATTGAAGACTCGAGGATTTCTGTTATTGTATTCTCAGAGAACTATGCTACTTCTTCATTTTGTTTGGACGAACTTGTCCACATCACTCATTGCTCCAAGGAAAAAGGTCGCCTTGTTCTACCTGTTTTCTATGGCGTTGAACCTTCTCACTTGCGACATCTGAACAACAACAGTTATGGTGAAGCGCTTGCTAAGCATGAAGAGAGGTTTCAAAATAACAAGGAAAACATGGAGCGGTTGCAGAAATGGAAGATAGCTCTTAACCAAGCTGCTAACTTATCTGGCTATCATTATAGTCCTTCTGAATATGAATACAAGTTTATTGAGAAGATAGTTGAAGACATCTCAAACAAGACGAATCGTGATTTTTTACATGTTGCCAAACACCCTGTTGGATTACATACCCAAATACAACAAGTAAAATTGCTTCTTGACAAGGGATCTAAGGAAGAGGTCCACATGGTAGGACTTCATGGAGCTGGAGGCATGGGTAAATCAACACTTGCAAAAGCAATTTTTAATTTCATTGCTGATCAGTTTGAAGGTTCATATTTTCTAGAAGATGTGAAAGAGAATTCAACTTTAAATAACTTGAAACACCTGCAGGAAAAGATCCTTATGAAAACGGTTAGATTAGACGATAAGTTAGGAGGTGTTAGTGAGGGGATTACAAAGATAAAAAAAATGCTATGTCAAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAACTAGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTTGGTGGTGGAAGTAGAGTCATCATTACGACTCGAAACAGACAGTTACTAACCTATCATGGGATAGAAAGATTGCATCACGTAAGCGGTCTATATGACGAAGAAGCTCATAAATTGTTGAGGTTGATGGCATTTAAAAATGGTGAAGTTCCTTCAAGTTATGAAGGCATTTTTAATCGTGCACTTACTTATGTTTCTGGCCTTCCATTAGCTATAGTAACAATAGGGTCCAATTTGTTTGGAAGGAGTGTAGAAGATTGGGAACGTATATTAGATGAGTATGAAAAGATTCCCAATAAAGAGATCCAAAGGATACTTAAAGTCAGCTATGATGCTCTGGAGGAAAAGGAGAAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGGTGTAAATGGACAAAGGTCAAAGATATACTTCATGCCCATTATGGCCATTGCATAAAACATCATGTTGAAGTGTTGGCCGAAAAATCTCTCATTAACCACCGGGAAAATGATAGTTATATGAGATTACATGACTTGATAGAGGATATGGGTAGAGAAGTTGTCCGACAAGAATCACCCGACAATCCTGGGGAACGCAGTAGGTTGTGGTTTCACGATGATATAGTTCAAGTTCTAAAAGAAAATATCGGAACTTGGAAAATTGAAATGATATATTTGAAGTGTCCCTCAGTGGAAAATGTAATAAAGTGGAGTGGAAAGGCCTTCACGAAGATGAAAAATCTCAAAACATTTATCATTGAAAATGGCCATTTTTCTAAAGGTCCCAATTATCTTCCAAGTAGTTTGAGATTTTGGAAATGGAAAGGATATCCTTCAGCATCTCTATTATGTGTTTTGAACAAGACGTTCGAGAAGATGAAAATTTTGAAAATTGATAATTGTGAATACTTAACAAATATACCCGACGTCTCGTGTCTCCCAAATTTAGAAAAAATTTCATTCAAAAATTGCAAGAGTTTAGTTACAATTCATGATTCTATTGGGTTCCTAAGTCAACTTCAAATCTTGAATGCTGCGGATTGTAACAAGCTATTGAGTTTTCCTCCCTTAAAGTTGAAATCTCTTCGTAAGTTGAAACTTTCCGGTTGTACAAGTCTCAAGAAATTTCCAGAAATATTGGGCAAGATGGAAAATATCAAGAAGATTATTTTGAGAAAAACTGGCATAGAAGAATTGCCCTTTTCATTTAATAATCTTACTAGACTCACTGATTTAACTATAGAGGGATGTGGAATACTTAAGTTGCCAACTAGCATTCTCATGATGTCAAATTTGTTCGAAGTTACGGTTTCGGGTTATACTCAGTTATTATCAAAACCTGATGATAAATTGAGTTCCACGTTGTCCGCAAATGTGAATGTTCTTTGCCTTAATGCAAGCAATGATGAATTTCTAACAATAGCTCTGATGTGGTTTTCGAATGTTGAAACCTTACACCTGTCGGGTAGCAATATTAAAATTCTTCCTGAAAGCCTAAAAAACTGCCTCTCTATTAAGTGCATTGATTTGTATGGTTGTGGAACTCTAGAAGAAATTAGAGGAATTCCGCCAAATCTAGAAGCATTGTCTGCATTGCGGTGCAAATCACTAACTTCATCAAGTAAAAGAATGCTAATGAGTCAGGAGCTGCATGAGTCTGGAAGCATCGAGTGTTGTTTTCCATCAATACTAAATGAGAGAATTCCAGAGTGGTTTGAGCACCAAACAAACAAATCAATTTCTTTTTCGTTCCGTAACAACCTCCCTTCCTTAGTTTTCTTATTTTCTTCAAAACTGGTTAGCGACATGTACCCTTCTATAAGAGTCTATTTGATTATCAATGATAATGTATATAACTCTAGAATTGGTTTGGTACCGGGTCATACATATCTATTTCCTTTTAAAGTGCAAGACTGGTACTTAGAAGAATACCAAAAATTGAAATCTATGCTGGACGAAGCACTTTTGAAAAATGAATGGATTCATGCTGAAGTTAGGTTTTGCGATTGGGGAAAAGAGTATGTTGTAGAAAGTGGAATCCACGTAATCAAACATTTGACTAACATGGATGATTTTCAATTCACTGATTCTTTGTTACGCAAAAATAAAATATCAGATGAATATCTCAAGAGCTCACGGTCAGTTATGAAATTACTGAATGATGAAGACATATCAGCAACACCTCCCAGATACCGAGTCTTAAAGACAATGATCAGTCAACCTCCATATGTGGTAACTTCTTCTGAAAAAGACCTCAACTTCTGTGCAATCATGTGA 3246 0.3697 MAMQPPSSTSSSGLSNNFSYDVFISFRGTDTRHGFTGNLYKALCDKGIRTFIDDKELQRGDEITSSLHKKIEDSRISVIVFSENYATSSFCLDELVHITHCSKEKGRLVLPVFYGVEPSHLRHLNNNSYGEALAKHEERFQNNKENMERLQKWKIALNQAANLSGYHYSPSEYEYKFIEKIVEDISNKTNRDFLHVAKHPVGLHTQIQQVKLLLDKGSKEEVHMVGLHGAGGMGKSTLAKAIFNFIADQFEGSYFLEDVKENSTLNNLKHLQEKILMKTVRLDDKLGGVSEGITKIKKMLCQKKILLILDDVDKLEQLEALAGGLDWFGGGSRVIITTRNRQLLTYHGIERLHHVSGLYDEEAHKLLRLMAFKNGEVPSSYEGIFNRALTYVSGLPLAIVTIGSNLFGRSVEDWERILDEYEKIPNKEIQRILKVSYDALEEKEKSVFLDIACCFKGCKWTKVKDILHAHYGHCIKHHVEVLAEKSLINHRENDSYMRLHDLIEDMGREVVRQESPDNPGERSRLWFHDDIVQVLKENIGTWKIEMIYLKCPSVENVIKWSGKAFTKMKNLKTFIIENGHFSKGPNYLPSSLRFWKWKGYPSASLLCVLNKTFEKMKILKIDNCEYLTNIPDVSCLPNLEKISFKNCKSLVTIHDSIGFLSQLQILNAADCNKLLSFPPLKLKSLRKLKLSGCTSLKKFPEILGKMENIKKIILRKTGIEELPFSFNNLTRLTDLTIEGCGILKLPTSILMMSNLFEVTVSGYTQLLSKPDDKLSSTLSANVNVLCLNASNDEFLTIALMWFSNVETLHLSGSNIKILPESLKNCLSIKCIDLYGCGTLEEIRGIPPNLEALSALRCKSLTSSSKRMLMSQELHESGSIECCFPSILNERIPEWFEHQTNKSISFSFRNNLPSLVFLFSSKLVSDMYPSIRVYLIINDNVYNSRIGLVPGHTYLFPFKVQDWYLEEYQKLKSMLDEALLKNEWIHAEVRFCDWGKEYVVESGIHVIKHLTNMDDFQFTDSLLRKNKISDEYLKSSRSVMKLLNDEDISATPPRYRVLKTMISQPPYVVTSSEKDLNFCAIM* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1914 1081 SMART AAA_5 221 376 IPR003593 -
Mtr6g1914 1081 Gene3D - 18 190 IPR035897 -
Mtr6g1914 1081 Gene3D - 191 350 IPR027417 -
Mtr6g1914 1081 SMART till_3 19 163 IPR000157 GO:0007165
Mtr6g1914 1081 Gene3D Ribonuclease Inhibitor 705 917 IPR032675 -
Mtr6g1914 1081 Gene3D Ribonuclease Inhibitor 532 704 IPR032675 -
Mtr6g1914 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 451 IPR027417 -
Mtr6g1914 1081 PANTHER ARCHAEAL ATPASE 30 990 - -
Mtr6g1914 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 166 IPR035897 -
Mtr6g1914 1081 PRINTS Disease resistance protein signature 224 239 - -
Mtr6g1914 1081 PRINTS Disease resistance protein signature 299 313 - -
Mtr6g1914 1081 PRINTS Disease resistance protein signature 392 406 - -
Mtr6g1914 1081 PRINTS Disease resistance protein signature 680 696 - -
Mtr6g1914 1081 Pfam NB-ARC domain 205 440 IPR002182 GO:0043531
Mtr6g1914 1081 Gene3D - 357 441 IPR042197 -
Mtr6g1914 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 990 IPR044974 GO:0006952
Mtr6g1914 1081 CDD AAA 201 338 - -
Mtr6g1914 1081 Pfam TIR domain 20 190 IPR000157 GO:0007165
Mtr6g1914 1081 ProSiteProfiles TIR domain profile. 18 189 IPR000157 GO:0007165
Mtr6g1914 1081 SUPERFAMILY L domain-like 512 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1914 Mtr-Chr6 34788678 34793066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1914 14 771 WRKY Transcription Factor Family AT4G12020 29.084 1.70e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1914 - - mtr:MTR_6g072460 1459.12