Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1913 ATGGCTATACAATCACCTTCCTCTTCCTCTTCATTTTCCTTTGGATTCACTTACCAAGTGTTCCTTAGTTTTAGGGGCACTGACACTCGGCACGGTTTTACCGGCAATCTCTACAAGGCTCTTACTGACAAGGGAATCCATACCTTCATTGATGACAATGATCTTCAAAGAGGAGACGAAATCACACCATCACTCGTCAAGGCCATTGACGAATCTCGGATTTTTATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATTTTGTTTGAACGAACTTGTCCACATCATTCATTGCTATAAGACAAAGGGTCGCCTCGTTTTGCCTGTTTTCTTGGGTGTGGAACCTACTAATGTGCGACATCAGACAGGTAGTTATGGTGAAGCATTGGATGAGCATGAAAAAAGGTTTCAAAATGATAAGAGTAACATGGAGAGGTTGCAGCGATGGAAAGTGGCTCTGAGCCAAGCTTCTAACTTGTCCGGCTACCATTTTTGTCCTGGATATCAATACGAATTTATTGGGAAGATAGTCAAAGACATCTCCAACAAGATCAATCGTGATATTTTACATGTAGCCAAATACCCTGTTGGATTACAATCCCGAGTACAACAGGTAAAACTGCTTCTCGATAAGGAATCTAATGAAAAGGTTAACATGATAGGACTTTATGGTACTGGAGGCTTGGGAAAATCAACACTTGCAAAAGCAATTTATAATTTCATTGCTGATCAATTTGAAGGTTTATGTTTTCTTCACGATGTGAAAGAGAATTCAGCTAAAAATAACTTGAAACATCTCCAAGAGAAGCTCCTTTTAAAAGCAACTGGGTTGGAAATTAACTTAGACCATGTTAGTGAGGGAATTCCAATCATTAAGGAAAGGCTGTGTAGAAAGAAGATTCTTTTGATTCTTGACGATGTTGACAGACTTGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTTGTGGAAGCCGAGTAATCATTACCACTCGAGACAAACACTTACTAACCTGTCATGGGATAGAAAGTACGCATGCAGTTGAAGGGCTATATGGGGAAGAAGCTCTTGAATTGTTAAAGTTGATGGCTTTTAAAAATGGCAATGTTCCTTCCAGTTATAATGACATTTTAATTCGTGCACTTACTTATGCTTCTGGCCTTCCATTAGCTATAGTAACAATAGGCTCGAACTTGTTTGGAAGGAGCGTAGAAGATTGGAAGCGTACATTGGATGAGTATGACAAGATTCCGAATAAAGAGATCCAAAGGATACTTAGAGTAAGTTATGATGCTTTGGAGGAAAAGGATCAAAGTGTCTTTCTAGACATTGCTTGTTGCTTCAATGGGTGTAAATGGACAGAGGTCAAACAAATACTTCATGCTCGTTATGGCCATTGCGTAAAACATCATGTTGGAGTGTTGGCTGAAAAATCTCTCATAGACCATTGGGAATATGACGATGATGTGACATTACATCATGCTGAAGGGTTGGATGGAAAATATCGCATATACAAAGATGATGTTCGTGTGACATTACACGACTTGATAGAGGACATGGCTAAAGAAGTCGTCCGTCAAGAATCACCCAAGAATCCTGGAGAACGCAGCAGGTTGTGGTTTTACGACGATATAGTTCAAGTTTTAAAAGAAAATATGGGAAGTAGGAACATTGAAATGATATATTTGAATTGTCACTCAACGGAAAACGTAATAGAGTGGGATGGAAATGCCTTCAAGAAAATGACAAATCTCAAAATACTTATCATTGAAAATGGTCATTTTTCTGAAGGTCCTAACTATCTTCCAAGTAGTTTGAGATGTTGGAAATGGGAAGAGTATCCTTCGAAGTCTCTATCATGTTTTTCGAACAAGAAGTTCGAGAATCTGAAAGTCTTGATATTGGACCGTTGTCAATATTTAACCGATATATCCAATGTCTCAAATCTTCCAAATTTAGAAGAGTTTTCGTTTCAAGATTGTAAAAATTTAATCACAATTCACAATTCTATTGGGCACTTGAATAAACTTGAAATCATAAGAGCAACCGGTTGCTGCAAGCTCGAGAGTTTTCCACCCTTACTGCTGCCCTCTCTTAAGGAATTGGAACTCTCTTATTGTGAGAGTCTCAAGAGTTTTCCAGAGTTGTTATGCAAGATGACAAATATAAAAGATATTTTTTTATTTTTTCATACTTCCATAGAAGAATTGCCATTTTCGTTTCAAAATCTCAGTGAACTTCATGTCTTACAAATATATCATGTTAGAATGCTGAGGTTCCCAAAACATAATGATAAAATGTATTCTATAGTGTTTTCAAATGTGACAGAACTTACTCTCTTGAACTGCAACCTCTCAGATGAATGTCTCCAAACAGTTCTCAAGTGGTGTGCTAATGTGAAAAATCTAAACTTATCGAGTAACAAGTTCAAAACTCTTCCTGAGTGCCTTAGTGAGTGTCACCGACTTTGGAACCTAAATGTTGAGTGCTGCTGGTGTCTTGAGGATATTAGAGGGATTCCACCAAATCTAAATTACTTTTCTGCATTGAGATGCAAATCATTGAGTTCCTCAAGTAGAAGAATGTTATTGAATCAGAAACTATATGAGGCTGGAGACACCAATTTTCGCTTCCCAAACGGAACAGAGGGGATCCCAGATTGGTTTGAGCACCAAATCAAGGGAGACACAATTTCTTTCTGGTTTCGTAAAAAGATCCCTTCTATAACTTCGATTCTACTTTTTCCGAGATCTATGCAGATTCCAAGAATCAATTTGTTTTTCAATGGCTATAGATTGGAAGATATTAATTTCTTACTGTGTGGTTCTGGCATGATGTTCAATTTGGACTCGGAACATGCATTTTTGTTTGATCTGAAATTGGAAGAACAGATTAAATTCGAGTTGGAAATGGACAAAGCACCTCTAAAAAATGAATGGATTCATGTAAAGCTGATTGTGGGTAAGTTTAGTTGCACGATGGTGGATGATTTTAGAGAGGATGAGATTCAAATATTAAGGAGTGTACAAATGGGAATCCACGTGTTGAAGGAAAAAAGCAACACGGAGGAGAATGTGATATTCACCAATCCTTATAGAAAATATAGCAATACTTCTTTATCACAATTTGAGCCTTCTCTGAAAAAGCAAAGATTGGGTGAAGTTGGAGTTTCAGAGACAGAAATTTTGCATCAGCAACATTTAGCAGCTTTATTGTCAGGAATGAAGAACTTGGTGCTTACTGAAACAAAAGAAAAGTAA 3270 0.3774 MAIQSPSSSSSFSFGFTYQVFLSFRGTDTRHGFTGNLYKALTDKGIHTFIDDNDLQRGDEITPSLVKAIDESRIFIPIFSANYASSSFCLNELVHIIHCYKTKGRLVLPVFLGVEPTNVRHQTGSYGEALDEHEKRFQNDKSNMERLQRWKVALSQASNLSGYHFCPGYQYEFIGKIVKDISNKINRDILHVAKYPVGLQSRVQQVKLLLDKESNEKVNMIGLYGTGGLGKSTLAKAIYNFIADQFEGLCFLHDVKENSAKNNLKHLQEKLLLKATGLEINLDHVSEGIPIIKERLCRKKILLILDDVDRLEQLEALAGGLDWFGCGSRVIITTRDKHLLTCHGIESTHAVEGLYGEEALELLKLMAFKNGNVPSSYNDILIRALTYASGLPLAIVTIGSNLFGRSVEDWKRTLDEYDKIPNKEIQRILRVSYDALEEKDQSVFLDIACCFNGCKWTEVKQILHARYGHCVKHHVGVLAEKSLIDHWEYDDDVTLHHAEGLDGKYRIYKDDVRVTLHDLIEDMAKEVVRQESPKNPGERSRLWFYDDIVQVLKENMGSRNIEMIYLNCHSTENVIEWDGNAFKKMTNLKILIIENGHFSEGPNYLPSSLRCWKWEEYPSKSLSCFSNKKFENLKVLILDRCQYLTDISNVSNLPNLEEFSFQDCKNLITIHNSIGHLNKLEIIRATGCCKLESFPPLLLPSLKELELSYCESLKSFPELLCKMTNIKDIFLFFHTSIEELPFSFQNLSELHVLQIYHVRMLRFPKHNDKMYSIVFSNVTELTLLNCNLSDECLQTVLKWCANVKNLNLSSNKFKTLPECLSECHRLWNLNVECCWCLEDIRGIPPNLNYFSALRCKSLSSSSRRMLLNQKLYEAGDTNFRFPNGTEGIPDWFEHQIKGDTISFWFRKKIPSITSILLFPRSMQIPRINLFFNGYRLEDINFLLCGSGMMFNLDSEHAFLFDLKLEEQIKFELEMDKAPLKNEWIHVKLIVGKFSCTMVDDFREDEIQILRSVQMGIHVLKEKSNTEENVIFTNPYRKYSNTSLSQFEPSLKKQRLGEVGVSETEILHQQHLAALLSGMKNLVLTETKEK* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1913 1089 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 989 IPR044974 GO:0006952
Mtr6g1913 1089 Gene3D - 354 437 IPR042197 -
Mtr6g1913 1089 PANTHER ARCHAEAL ATPASE 28 989 - -
Mtr6g1913 1089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 447 IPR027417 -
Mtr6g1913 1089 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mtr6g1913 1089 SMART AAA_5 217 372 IPR003593 -
Mtr6g1913 1089 Pfam TIR domain 18 186 IPR000157 GO:0007165
Mtr6g1913 1089 PRINTS Disease resistance protein signature 220 235 - -
Mtr6g1913 1089 PRINTS Disease resistance protein signature 295 309 - -
Mtr6g1913 1089 PRINTS Disease resistance protein signature 388 402 - -
Mtr6g1913 1089 PRINTS Disease resistance protein signature 697 713 - -
Mtr6g1913 1089 Gene3D Ribonuclease Inhibitor 542 771 IPR032675 -
Mtr6g1913 1089 Gene3D - 16 185 IPR035897 -
Mtr6g1913 1089 CDD AAA 197 336 - -
Mtr6g1913 1089 Gene3D Ribonuclease Inhibitor 772 873 IPR032675 -
Mtr6g1913 1089 Gene3D - 186 346 IPR027417 -
Mtr6g1913 1089 SUPERFAMILY L domain-like 570 893 - -
Mtr6g1913 1089 Pfam NB-ARC domain 201 435 IPR002182 GO:0043531
Mtr6g1913 1089 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr6g1913 1089 SUPERFAMILY "Winged helix" DNA-binding domain 423 553 IPR036390 -
Mtr6g1913 1089 SMART till_3 17 160 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1913 Mtr-Chr6 34770496 34775997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1913 12 853 WRKY Transcription Factor Family AT4G12020 26.712 2.22e-65 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1913 - - mtr:MTR_6g071935 1322.76