Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1906 ATGGATGGAGATAATGGACTTAACATAAGCAATTGGGGATACTATGAACCAGTTTCATCTTTTAAGAATCATCTTGGTTTACAACTGATGCCATCCATGCCGGAAAAGCCGCCTTTGATTGGAAGTCGAAATGCTGCGGTTATGTCGGGAACTAACGGTGCATATCACCATCGGGAAATTGGGATGCCTCAAACTACTTACCCTATGGATTACATGAGGGATGCATGGATTAGTAGTCAGAGGGATAATAAGTATATGAATATGAATATGATACCTACTAACCCTCCAGGGTATAGTACTAGTATTCCCGAGACATCTTCGGCGCATCATATTCAAATGATTCGACCACCTGAATTGGTTAAGGAAGAAATACCAATGGAGGAAGTACCTGTGGTTGAGAAGGTGAATGGAACTGGTAAGAAGAGGCAAGGACCGAAGGTGCCGAAGTCGCCTAAGGCAAAGAAGCCGAAGAGAGGACCCCGTGTGCCGAAGGACGAGAATTCTCCTTCGGTTCAACGAACACCGAGGGCACCAAAGAAAACTACGGAAATTGCAATTAACGGGATTGATTTGGATATTTCAAGTATTCCGATTCCTGTTTGTTCTTGCACCGGGACACCTCAACAATGTTATAGATGGGGCTCGGGTGGATGGCAGTCTGCATGCTGCACAACGGCTATATCGATATATCCTTTGCCTATGAGTACTAAACGACGCGGTGCTAGAATAGCCGGAAGGAAAATGAGTATAGGAGCTTTTAAGAAAGTATTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCGATAGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTTACTATCAGGTAG 870 0.4379 MDGDNGLNISNWGYYEPVSSFKNHLGLQLMPSMPEKPPLIGSRNAAVMSGTNGAYHHREIGMPQTTYPMDYMRDAWISSQRDNKYMNMNMIPTNPPGYSTSIPETSSAHHIQMIRPPELVKEEIPMEEVPVVEKVNGTGKKRQGPKVPKSPKAKKPKRGPRVPKDENSPSVQRTPRAPKKTTEIAINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTAISIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1906 289 PANTHER - 1 289 IPR010409 -
Mtr6g1906 289 SMART GAGA_bind_2 1 289 IPR010409 -
Mtr6g1906 289 MobiDBLite consensus disorder prediction 131 183 - -
Mtr6g1906 289 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 289 - -
Mtr6g1906 289 Pfam GAGA binding protein-like family 1 289 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1906 Mtr-Chr6 34615075 34616915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1906 1 289 BBR or BPC Transcription factor family AT2G01930 51.495 1.28e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mtr6g1906 GAGA_bind 3.3e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1906 - - cam:101489911 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1906 6 34615075 34616915 Mtr6g1906 6 34615075 34616915 ECH