Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1903 ATGGCTATGCAATCACTTTCTTCCTCCTCTACTTCCTTTTCTTATGATTTCAACTTTGATGTGTTCATTAGTTTCAGAGGTACCGACACTCGATTCGGTTTCACCGGTAATCTCTATAAAGCTCTCTCTGACAAGGGAATCCGAACCTTCATTGATGATAAGGAGCTTCAGAAAGGTGACGAAATCACACCTTCACTCCTCAAGAGAATTGAAGAATCGAGAATTGCCATTATCGTCTTTTCTAAGGAATATGCTTCTTCTTCATTTTGTTTAGACGAACTTGTCCATATCATTCACTACTTCAAGGAAAAAGGTCGCCTTGTTCTGCCAGTTTTCTATGATGTAGAACCTTCTCACGTGCGACATCAGAATTATAGTTATGGTGAAGCACTTGCTAAGCATGAAGAGAGGTTCCAAAAGAGCAAAAAAAACATGGAGCGGTTGCTGAAATGGAAGATAGCTCTGAACAAAGTTGCTGACTTATCTGGCTACCATTTCAATCTTGGAAATGAATATGAACGCGATTTTATTGAAAAAATAGTTACAGACGTCTCCTACAAGATCAACCACGTTCCTCTACATGTTGCTGATTACCTTGTTGGACTCAAATCTCGAATATCAGAAGTGAATTCACTTTCAGAGTTGGGATCAAACGATGGAGTCTGCATGATAGGAATCCTTGGAACTGGGGGAATGGGAAAGACAACACTTGCTCAAGCAGTTTATAACTTGATTGCTAATCAATTTGAATGCAAATGTTTTCTTCACAATGTGAGAGAAAATTCAGTAAAACATGGCTTAGAGTATCTCCAAGAGCAGCTCCTCTCCAAATCAATCGGATTTGAAACTAAGTTTGGACATGTTAATGAAGGAATTCCAATCATAAAACGAAGGCTATATCAGAAGAAAGTTTTGTTGATTCTCGATGATGTTGACAAAATAAAGCAATTGCAGGTTTTGATTGGAGAGCCTGGTTGGCTTGGTCGTGGCAGCAGAGTCATCATTACCACTCGTGACAAACATTTGTTATCATGTCATGGGATTAAAAAAATATATGAAGCAGATGGTTTAAATAAGGAACAAGCTCTTGAATTGTTAAGAATGATGGCTTTTAAAAGTAACAAAAATGATTCAAGGTATGATAGTATTTTAAACCGTGCAGTTAAATATGCTGCTGGCCTTCCATTAGCTTTAGAAGTAGTGGGTTCTAACTTGTTTGGAAAGACTATAGCAGAATGTGAGTCTTTATTAGATAAGTATGAAAGAATTCCACATGAAGATATCCAAAAGATACTTAAAGTAAGCTTTGATGCTTTGGACGAGGAACAACAGAATGTCTTTTTGGATATTGTTTGTGTCTTTAAAGGGCATCCAGAGGAGTATATCCAAAATTTACTTCATGATCATTATGGTTATTGCATAAAAAGCCACCTCAGAGTGTTGGTTGATAAATCTCTCATAAAGATTAAGGCTAATTATTATTGTGGTGTGACATTACATGACTTGATAGAGGATATGGGTATAGAAATCATCCGACAAGAATCAATTAGAGAACCTGGAGAACGCAGTAGGTTGTGGTCTCGTGATGATATTGTTCATGTTTTACAAGAAAACACAGGAACTAGTAAAATTGAAATGATATATCTGGATCGGTCCATTGCGAAACATTTAAGAGGCATGAATGAAATGGTCTTCAAGAAGATGACAAATCTCAAAACACTCCACATTCAAAGTTACGCTTTTACTGAAGGTCCCAATTTTTCTAAAGGGCCCAAGTATCTTCCAAGTAGTTTGAGAATATTGGAATGCAATGGATGCACTTCAGAGTCTTTATCATCTTGTTTTTCGAACAAGAAGAAGTTCAACAACATGAAAATCTTGACATTGGACAATAGTGACTATTTAACTCATATACCCGATGTCTCAGGTCTTCCAAATTTAAAAAACTTCTCATTTCAAGGTTGTGTTAGGTTAATTACAATTCACAATTCGGTTGGGTACCTAAATAAACTTAAAATCTTAAATGCCGAGTACTGCGAGCAGCTTGAGAGTTTTCCATCCTTACAGTTGCCCTCTCTTGAGGAATTGAAACTCTCTGAGTGTGAGAGTCTCAAGAGCTTTCCAGAATTATTATGCAAGATGACAAATATAAAAGAGATTACGATATATGAAACATCCATAGGAGAATTGCCATTTTCATTTGGAAATCTCAGTGAACTTCGTCGCTTAATAATATTTAGTGACAATTTCAAAATTCTTCCCGAGTGCCTTAGTGAATGCCACCATCTTGTTGAAGTTATCGTGGATGGCTGCTATTCCCTTGAGGAAATCAGAGGGATTCCACCGAATCTAGAAAGACTTTCTGCAGTAGATTGCGAGTCGTTGAGTTCCGCAAGTAGAAGAATGCTATTGAGTCAGAAACTAAACAAGGCTGGATGCACCTATATTCATTTCCCAAACAAAACAGAGGGGATTCCAGATTGGTTTGAGCACCAAACCAGGGGAGACACAATTTCTTTCTGGTTTCGTAGAAAGATCCCTTCTATAACTTGTATTTTTCTTATTTCGGGATTTGCGGAGCTTCCGAAATATAATTTATTTGTCAATGGCTATCAATGTTTTAGTTCTATCTATGATGAAATTTATGATGGTCTGTCGATGATACATGCATTTTTGATTTATCTGAGATTGGATCAGCATATTAACAAAAGTTTTGAAGGAAAGCCTGAACTATACGAAGCATTTAAAAATAATGAATGGAACCATGTGGAGCTTAAGTGGAGTGTCATGGAGATGCATGATCATAGTCAAACCCAGGAGGATGATCATGTTAGTGCACAAATGGGAATCAACGTGTCATGGGAGGGGGACGATTTTAGTGACTCGGAGGTGGAGAAAAGCAACGAGGAGGGGGAAGTGAGATTCAATTTTAGTGACTCGGATTTTAGTGACTCCTTATAG 2961 0.3739 MAMQSLSSSSTSFSYDFNFDVFISFRGTDTRFGFTGNLYKALSDKGIRTFIDDKELQKGDEITPSLLKRIEESRIAIIVFSKEYASSSFCLDELVHIIHYFKEKGRLVLPVFYDVEPSHVRHQNYSYGEALAKHEERFQKSKKNMERLLKWKIALNKVADLSGYHFNLGNEYERDFIEKIVTDVSYKINHVPLHVADYLVGLKSRISEVNSLSELGSNDGVCMIGILGTGGMGKTTLAQAVYNLIANQFECKCFLHNVRENSVKHGLEYLQEQLLSKSIGFETKFGHVNEGIPIIKRRLYQKKVLLILDDVDKIKQLQVLIGEPGWLGRGSRVIITTRDKHLLSCHGIKKIYEADGLNKEQALELLRMMAFKSNKNDSRYDSILNRAVKYAAGLPLALEVVGSNLFGKTIAECESLLDKYERIPHEDIQKILKVSFDALDEEQQNVFLDIVCVFKGHPEEYIQNLLHDHYGYCIKSHLRVLVDKSLIKIKANYYCGVTLHDLIEDMGIEIIRQESIREPGERSRLWSRDDIVHVLQENTGTSKIEMIYLDRSIAKHLRGMNEMVFKKMTNLKTLHIQSYAFTEGPNFSKGPKYLPSSLRILECNGCTSESLSSCFSNKKKFNNMKILTLDNSDYLTHIPDVSGLPNLKNFSFQGCVRLITIHNSVGYLNKLKILNAEYCEQLESFPSLQLPSLEELKLSECESLKSFPELLCKMTNIKEITIYETSIGELPFSFGNLSELRRLIIFSDNFKILPECLSECHHLVEVIVDGCYSLEEIRGIPPNLERLSAVDCESLSSASRRMLLSQKLNKAGCTYIHFPNKTEGIPDWFEHQTRGDTISFWFRRKIPSITCIFLISGFAELPKYNLFVNGYQCFSSIYDEIYDGLSMIHAFLIYLRLDQHINKSFEGKPELYEAFKNNEWNHVELKWSVMEMHDHSQTQEDDHVSAQMGINVSWEGDDFSDSEVEKSNEEGEVRFNFSDSDFSDSL* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1903 986 Gene3D - 356 440 IPR042197 -
Mtr6g1903 986 SUPERFAMILY L domain-like 565 841 - -
Mtr6g1903 986 SMART till_3 18 161 IPR000157 GO:0007165
Mtr6g1903 986 Gene3D - 189 351 IPR027417 -
Mtr6g1903 986 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 927 IPR044974 GO:0006952
Mtr6g1903 986 Gene3D Ribonuclease Inhibitor 534 688 IPR032675 -
Mtr6g1903 986 SUPERFAMILY "Winged helix" DNA-binding domain 427 536 IPR036390 -
Mtr6g1903 986 Gene3D Ribonuclease Inhibitor 689 834 IPR032675 -
Mtr6g1903 986 Pfam NB-ARC domain 212 439 IPR002182 GO:0043531
Mtr6g1903 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 450 IPR027417 -
Mtr6g1903 986 PANTHER ARCHAEAL ATPASE 29 927 - -
Mtr6g1903 986 CDD AAA 200 339 - -
Mtr6g1903 986 Gene3D - 17 188 IPR035897 -
Mtr6g1903 986 Pfam TIR domain 18 190 IPR000157 GO:0007165
Mtr6g1903 986 PRINTS Disease resistance protein signature 223 238 - -
Mtr6g1903 986 PRINTS Disease resistance protein signature 298 312 - -
Mtr6g1903 986 PRINTS Disease resistance protein signature 391 405 - -
Mtr6g1903 986 PRINTS Disease resistance protein signature 688 704 - -
Mtr6g1903 986 ProSiteProfiles TIR domain profile. 17 188 IPR000157 GO:0007165
Mtr6g1903 986 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1903 Mtr-Chr6 34445508 34449760 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1903 13 801 WRKY Transcription Factor Family AT4G12020 30.542 5.77e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1903 - - mtr:MTR_6g074780 1168.3