Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1894 ATGGCTATGCAATTACCTTCTTCCTCCTCGTCCTCCTCCCTCTCTAATGATTTCATCTATGACGTGTTCATTAGTTTCAGGGGTATCGACACTCGATCTGGCTTCACCGGTCATCTCTATAAAGCTCTTTGTGACAAAGGAATCCGAACCTTCATTGATGACAAGGAGCTTCAGAGAGGTGACGAAATCACACCTTCGCTCCTCAAGAGCATTGAACACTCTAGGATTGCCATTATTGTATTCTCTGAGAACTATGCAACTTCGTCGTTTTGTTTAGATGAGCTTGTCCACATCATTAACTACTTCAAGGAAAAAGGTCGCCTTGTTCTACCAGTTTTCTATGGTGTGGAACCTTCTCACGTGCGACATCAAAATAACAAGTATGGTGAAGCACTTACTGAGTTTGAAGAAATGTTCCAAAATAACAAGGAAAACATGGATCGGTTGCAGAAATGGAAGATAGCTCTTAACCAAGTTGGTAACTTATCTGGCTTTCATTTCAAGAAAGATGCATATGAATATGAGTTTATTAAGAAGATAGTTACAGAGATTTCCAAAAAGATCAACCGTGGTCTTTTAGAAGTTGCTGATCACCCTATTGTGGGACTTGAGTCTCGACTGCTGCATGTAATGTCACTTCTGGATGTTGGGTGTGATGATGGAGCATGTATGATTGGGATATGTGGAAGTGGAGGATTGGGTAAAACGACACTTACTCGTGCACTTTATAATTTGATTGCTGATCAATTTGATGGTTTGTGTTTCCTTCACAGTGTGCGAGAAAATTCAATTAAATATGGCTTAGAACATCTCCAGAAGCAACTCCTCTCCAAAACACTCGGAGAGGAATTTAATTTTGGACATGTTAGTGAAGGAATTCCAATCATAAAAGATAGGCTGCATCAAAAGAAAGTTTTGTTGATTCTCGATGATGTTGACAAACCAAAGCAATTGAAGGTTTTGGTTGGAGAGCCTGGTTGGCTCGGTCCTGGAAGTAGAGTCATCATTACCACTCGAGACAGACATTTGCTATCATGTCATGGGATAACTAGAATTTATGACTTAGATGGATTAAATGACAAAGAAGCTCTTGAATTGTTTATAAAGATGGCATTTAAAAGTAACATAATTGATTCAAGTTATGATTACATTTTAAATCGCGCAGTAAAATATACTTCTGGCCTTCCATTAGCTATAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGTATTGAAGAGTGGGAATCTACATTAGATAAGTATGAAAGGACGCCACCTGAAGATATCCAAAATATATTCAAAGTAAGCTTTGATGCTTTGGACAAAGAAGAAAAGAGTGTTTTTTTGGATATTGTATGTTGCTTTAAAGGGTGTCCATTGGCATATGTCGAAAAAATACTCCATTTTCATTATGGATATTGCATAAAAAGCCACATTGGAGTGTTGGTTGAAAAATCTCTCATAAAGACTTATATTGAATATGATTGGAGAAGGAGACCAACGAATGTTATAGTGACATTACATGACTTGATAGAGCACACGGGTAAAGAAATTGTCCAACAAGAATCACCTGAAGAACCAGGAGAACGAAGTAGGCTATGGTGTCAAGATGATATAGTTCATGTTTTAAAAGAAAACATTGGAACTAGTAAAATTGAAATGATATATCTAAATTTCCCCACAAAGAATTCCGAGATAGATTGGAATGGAAAGGCCTTCAAGAAGATGACAAAACTCAAAACACTTATTATTGAAAATGGTCAATTTTCTAAAGGTCCCAAGCATCTTCCTAGTACTTTGAGAGTATTGAAGTGGAATAGATATCCTTCGGAGTCTATGTCATCTAGTGTTTTTAACAAGACGTTCGAGAAGATGAAAATTTTGAAAATTGATAATTGTGAATACTTAACAAATATATCAGATGTCTCGTTTCTCCCAAATTTAGAAAAAATTTCATTTAAAAACTGCAAGAGTTTAGTTAGAATTCATGATTCTATTGGGTTCCTAAGTCAACTTCAAATCTTGAATGCTGCGGATTGTAACAAGCTATTGAGTTTTCCTCCCTTAAAGTTGAAATCTCTTCGTAAGTTGAAACTTTCCGGTTGTACAAGTCTCAAGAAATTTCCAGAAATATTGGGCAAGATGGAAAATATCAAGAAGATTATTTTGCGAAAAACTGGCATAGAAGAATTGCCCTTTTCATTTAATAATCTTATTGGACTAACTGATTTAACTATAGAGGGATGTGGAAAACTTAGCTTGCCAAGTAGCATTCTCATGATGTTGAATTTGTTGGAAGTTTCTATTTTTGGTTATAGTCAACTATTGCCAAAACAGAATGATAATTTGAGTTCCACGTTGTCTTCAAATGTGAATGTTCTTCGCCTTAATGCAAGCAATCATGAATTTCTAACAATAGCTCTGATGTGGTTTTCAAATGTTGAAACCTTATACCTGTCAGGTAGCACCATCAAAATTCTTCCTGAAAGCCTAAAAAATTGCCTCTCTATTAAGTGCATTGATTTGGATGGTTGCGAAACTCTAGAAGAAATTAAAGGGATTCCGCCAAATCTAATAACATTGTCTGCATTGCGGTGCAAATCATTGACTTCATCAAGTAAAAGCATGCTAATTAGTCAGGAATTGCATTTGGCTGGGAGCATCGAGTGTTGTTTTCCATCATCACCAAGTGAGAGGACTCCTGAGTGGTTTGAGTACCAAAGAAGAGAATCGATTTCTTTTTCGTTCCGTAACAACTTCCCTTCCTTAGTTTTCTTATTTTCTTCCAGAGTGAATCACCCATCTTATTATTCGAGAGATTATATAGTTAACCCATTCGATTCGATAAGAGTCCATTTGATTATCAATGAAAACGTATATAACTGTGGTATAGGTTTGGAACCGGGTCATACATATCTATTTCCCTTTAATGTGCAAGACTGGTACTTAGAAGAATACCACAAATTTAAATCAATGCTTGACGATGCGCTTTTGAAAAATGAATGGATTCATGCTGAAGTTAGGTTTTGCAATTGGGGAAAAGAGTATGTTGTAGAAAGTGGAATCCACGTAATCAAACATTTGACTAACATGGATGATTTTCAATTCACTGATTCTTTCTTATGCAAAAATAGAATATCGGATGAATATCTCAAGAGCTCACGATCAGATATGAAATTACTGAGTGATGAAGACATATCAGCAACACTTCCCAGATACCGAGCCTTAAGGAGAAACATGCTTACATTATTGCTTCGATATCAAAGATACTACTCAGTGCCTAACCCCTACTATAAAAAAATCGACAGCCAAACCTGTTCAATGATGTGA 3330 0.3628 MAMQLPSSSSSSSLSNDFIYDVFISFRGIDTRSGFTGHLYKALCDKGIRTFIDDKELQRGDEITPSLLKSIEHSRIAIIVFSENYATSSFCLDELVHIINYFKEKGRLVLPVFYGVEPSHVRHQNNKYGEALTEFEEMFQNNKENMDRLQKWKIALNQVGNLSGFHFKKDAYEYEFIKKIVTEISKKINRGLLEVADHPIVGLESRLLHVMSLLDVGCDDGACMIGICGSGGLGKTTLTRALYNLIADQFDGLCFLHSVRENSIKYGLEHLQKQLLSKTLGEEFNFGHVSEGIPIIKDRLHQKKVLLILDDVDKPKQLKVLVGEPGWLGPGSRVIITTRDRHLLSCHGITRIYDLDGLNDKEALELFIKMAFKSNIIDSSYDYILNRAVKYTSGLPLAIEVVGSNLFGKSIEEWESTLDKYERTPPEDIQNIFKVSFDALDKEEKSVFLDIVCCFKGCPLAYVEKILHFHYGYCIKSHIGVLVEKSLIKTYIEYDWRRRPTNVIVTLHDLIEHTGKEIVQQESPEEPGERSRLWCQDDIVHVLKENIGTSKIEMIYLNFPTKNSEIDWNGKAFKKMTKLKTLIIENGQFSKGPKHLPSTLRVLKWNRYPSESMSSSVFNKTFEKMKILKIDNCEYLTNISDVSFLPNLEKISFKNCKSLVRIHDSIGFLSQLQILNAADCNKLLSFPPLKLKSLRKLKLSGCTSLKKFPEILGKMENIKKIILRKTGIEELPFSFNNLIGLTDLTIEGCGKLSLPSSILMMLNLLEVSIFGYSQLLPKQNDNLSSTLSSNVNVLRLNASNHEFLTIALMWFSNVETLYLSGSTIKILPESLKNCLSIKCIDLDGCETLEEIKGIPPNLITLSALRCKSLTSSSKSMLISQELHLAGSIECCFPSSPSERTPEWFEYQRRESISFSFRNNFPSLVFLFSSRVNHPSYYSRDYIVNPFDSIRVHLIINENVYNCGIGLEPGHTYLFPFNVQDWYLEEYHKFKSMLDDALLKNEWIHAEVRFCNWGKEYVVESGIHVIKHLTNMDDFQFTDSFLCKNRISDEYLKSSRSDMKLLSDEDISATLPRYRALRRNMLTLLLRYQRYYSVPNPYYKKIDSQTCSMM* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1894 1109 SUPERFAMILY "Winged helix" DNA-binding domain 428 544 IPR036390 -
Mtr6g1894 1109 SMART till_3 19 162 IPR000157 GO:0007165
Mtr6g1894 1109 PANTHER ARCHAEAL ATPASE 30 1009 - -
Mtr6g1894 1109 Gene3D - 19 188 IPR035897 -
Mtr6g1894 1109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 1009 IPR044974 GO:0006952
Mtr6g1894 1109 Gene3D Ribonuclease Inhibitor 549 713 IPR032675 -
Mtr6g1894 1109 PRINTS Disease resistance protein signature 224 239 - -
Mtr6g1894 1109 PRINTS Disease resistance protein signature 299 313 - -
Mtr6g1894 1109 PRINTS Disease resistance protein signature 392 406 - -
Mtr6g1894 1109 PRINTS Disease resistance protein signature 689 705 - -
Mtr6g1894 1109 CDD AAA 227 340 - -
Mtr6g1894 1109 Pfam NB-ARC domain 209 440 IPR002182 GO:0043531
Mtr6g1894 1109 Pfam TIR domain 20 189 IPR000157 GO:0007165
Mtr6g1894 1109 Gene3D - 357 441 IPR042197 -
Mtr6g1894 1109 SUPERFAMILY L domain-like 560 888 - -
Mtr6g1894 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 451 IPR027417 -
Mtr6g1894 1109 Gene3D Ribonuclease Inhibitor 714 886 IPR032675 -
Mtr6g1894 1109 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 165 IPR035897 -
Mtr6g1894 1109 ProSiteProfiles TIR domain profile. 18 188 IPR000157 GO:0007165
Mtr6g1894 1109 Gene3D - 189 349 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1894 Mtr-Chr6 34307372 34311941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1894 20 771 WRKY Transcription Factor Family AT4G12020 29.523 6.36e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1894 - - mtr:MTR_6g072460 2181.37