Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1893 ATGGCTATGCAGTCTCCTTCCTCATCCTCTTCATTTTCTTATGGATTCACTTACCAAGTGTTCCTCAGTTTTAGGGGCACTGACACTCGGTACGGTTTTACGGGCAATCTCTACAAGGCTCTTATTGACAAGGGAATCCATACCTTCATTGATGACAATGATCTTCAAAGAGGAGATGAAATCACACCATCACTCATCAAGGCCATTGAAGAATCTAGAATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCAAAATTTTGCTTGGACGAACTTGTTCACATTATTCATTGCTATAAGACAAAGGGTCGCCTCGTCTTGCCTATTTTCTTTGGTGTGGATCCTACTAATGTGCGCCATCATACATGTAGCTATGGTGAAGCATTGGCTGAGCATGAAAAAAGGTTTCAAAATGATAAGGATAACATGGAGAGGTTGGAGCGATGGAAAGTGGCTCTGAGCCAGGCTGCTAACTTGTCCGGCTACCATGATAGTCCTCCTCGATATGAATACAAGTTGATTGGAGAGATAGTCAAATACATCTCCAACAAGATCAATCGTCAGCCCTTACATGTTGCTAATTACCCTGTTGGATTGCACTCTCGAGTACAAGAAGTGAAATCGCTTCTTGATGAGGGACCTGATGATGGGGTCCATATGGTTGGAATTTATGGGATTGGAGGCTTGGGTAAATCAGCACTTGCAAGAGCAATCTATAATTTTGTTGCTGATCAATTTGAAGGTTTATGTTTTCTTCATGATGTGAGAGAGAATTCAGCTCAAAATAACTTGAAACATCTCCAAGAGAAGCTTCTTCTAAAAACAACTGGATTGAAAATCAAGTTAGATCATGTTTGTGAGGGGATTCCAATTATAAAGGAAAGACTGTGTAGAAATAAGATTCTTTTGATTCTCGATGATGTTGACGATATGGAGCAACTACATGCTTTGGCTGGAGGACCTGATTGGTTTGGCCATGGAAGCAGGGTCATCATTACCACTCGAGACAAACATTTACTGACCAGTCATGATATAGAAAGAACATATGCAGTAGAGGGGTTGTATGGGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAATAACAAAGTACCTTCAAGTTATGAAGACATTTTAAATCGTGCAGTTTCATATGCTTCAGGTCTTCCCTTAGTTTTAGAGATAGTGGGTTCCAACTTGTTTGGAAAGAGCATAAAAGAATGGAAGGGTACATTAGATGGATATGAAAAGATTCCCAATAAAAAGATCCACGAGATACTTAAAGTAAGCTATGATGCTTTGGAGGAAGAGCAGCAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGATGTGGATGGGAGGAGTTTGAAGATATACTTCATGTTCATTATGGCCATTGCATAACACATCATCTAGGAGTGTTGGCTGAAAAATCTCTCATTAAGATTAGTACTTGTTACCATTCGGGATCTATTGATGTTGTAAGAGTACATGACTTGATAAAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCACCTAAAGATCCTGAAAAACGAAGTAGGTTATGGCGTCATGAAGATATAGTTCATGTTATAAAAGAAAACATTGGAACTAGTAAAATTGAAATGATAAATATGAATTTCCACTCCATGGAATCCGTAATAGACCAGAAAGGAAAGGCCTTCAAAAAGATGACAAAACTGAGAACACTTATCATTGAAAATGGACATTTTTCTGAAGGTCTCAAGTATCTTCCAAGCAGTTTGATAGTATTGAAATGGAAAGGATGTTTATCGGAGTCTCTATCATCTAGTATTTTAAGCAAGAATTTCCAAAATATGAAAGTCTTGACATTGGACGATAATGAATATTTAACCCACATACCTGATCTCTCAGGTCTTCAAAATTTAGAAAAGTTCTCGTTTAAATATTGTGAGAATTTAATTACAATTGACAATTCGATTGGACACCTAAATAAACTTGAAAGGTTAAGTGCATTTGGTTGCAGCAAGCTTGAACGTTTTCCACCTTTAGGTTTGGCATCTCTTAAAGAATTGAATCTATGTTGTTGTGATAGTCTCAAGAGTTTTCCAAAATTATTATGCGAGATGACAAACATAGACTGTATTTGGTTGAATTATACTCCCATAGGAGAATTGCTATCTTCATTTCAAAATCTGAGTGAACTTGATGAGTTATCAGTACGGGAATGTGGAATGCTGAATGATAAAATGTATTCTATAATGTTTTCAAATGTGACAGAGCTTAGTCTCAAAGATTGCAACCTCTCAGATGAATACCTCCAAATAGTTCTTAAGTGGTGTGTTAATGTTGAAGAACTAGAGTTATCAAACAACAATTTCAAAATTCTTCCTGAGTGTCTTAGTGAATGTCACCATCTTAAGCATCTTGATTTGTCTTACTGCACATCTCTTGAGGAAATTAGAGGGATTCCACCGAATCTAAAAGAGCTTTCTGCAGAAGGATGTAAATCATTGAGTTCATCAAGTAGAAGAATGTTAATGAGTCAGCAACTACATGAGGCTCAATGGACCTATTTTGTTTTCCCAAACGGAACAGAGGGGATACCAGATTGGTTTGAGCACCAAAGCAAGGGACCCACAATTTCTTTCTGGTTTCGTAAAGAAATCCCTTCTATAACATGTATTTTTATTCTTCCGGAAGGCAAAAATGGGGTAGCTGACTCAGGAGTCAATTATTTTGTGAATGGATATGAAATTGAGTTAGATGGTTCTTTTTACCAGTTTAGCTATGTGTACTTGAAGCAGACAAGTTTGTTTCATACCCTGAAATGGAATGAACTCAGTGGAAGACAATATGACTATGATATAATGGACAAAGTACTTTCGAAAAATGAATGGATCCATGTGGAGCTTAAGTTGGATGATTCGAGTTTGAATCGACTTAGTGAGGAAGAGATGAATAAAATATTAAGGAGTGCTCAAATCGGAATCCACGTGTTAATGGAGAAAAGCAACACGGAGGAGAATGTGGTATTCACCAATCCTTATATTAGAAAGACAAAATCAGATGAATATCTTAATGCTTCATTATCATTATCACAAGAGAAAATGAAACGAAAGAAATTTTCAATCCGTATAAATCTTCGGAGAAAGATTTGGGTGCTTCTTAAATTCAGGGCTAGGTTCAGAAAACAAAAAGAGCACCGGAGCTAG 3213 0.3722 MAMQSPSSSSSFSYGFTYQVFLSFRGTDTRYGFTGNLYKALIDKGIHTFIDDNDLQRGDEITPSLIKAIEESRIFIPVFSINYASSKFCLDELVHIIHCYKTKGRLVLPIFFGVDPTNVRHHTCSYGEALAEHEKRFQNDKDNMERLERWKVALSQAANLSGYHDSPPRYEYKLIGEIVKYISNKINRQPLHVANYPVGLHSRVQEVKSLLDEGPDDGVHMVGIYGIGGLGKSALARAIYNFVADQFEGLCFLHDVRENSAQNNLKHLQEKLLLKTTGLKIKLDHVCEGIPIIKERLCRNKILLILDDVDDMEQLHALAGGPDWFGHGSRVIITTRDKHLLTSHDIERTYAVEGLYGTEALELLRWMAFKNNKVPSSYEDILNRAVSYASGLPLVLEIVGSNLFGKSIKEWKGTLDGYEKIPNKKIHEILKVSYDALEEEQQSVFLDIACCFKGCGWEEFEDILHVHYGHCITHHLGVLAEKSLIKISTCYHSGSIDVVRVHDLIKDMGKEVVRQESPKDPEKRSRLWRHEDIVHVIKENIGTSKIEMINMNFHSMESVIDQKGKAFKKMTKLRTLIIENGHFSEGLKYLPSSLIVLKWKGCLSESLSSSILSKNFQNMKVLTLDDNEYLTHIPDLSGLQNLEKFSFKYCENLITIDNSIGHLNKLERLSAFGCSKLERFPPLGLASLKELNLCCCDSLKSFPKLLCEMTNIDCIWLNYTPIGELLSSFQNLSELDELSVRECGMLNDKMYSIMFSNVTELSLKDCNLSDEYLQIVLKWCVNVEELELSNNNFKILPECLSECHHLKHLDLSYCTSLEEIRGIPPNLKELSAEGCKSLSSSSRRMLMSQQLHEAQWTYFVFPNGTEGIPDWFEHQSKGPTISFWFRKEIPSITCIFILPEGKNGVADSGVNYFVNGYEIELDGSFYQFSYVYLKQTSLFHTLKWNELSGRQYDYDIMDKVLSKNEWIHVELKLDDSSLNRLSEEEMNKILRSAQIGIHVLMEKSNTEENVVFTNPYIRKTKSDEYLNASLSLSQEKMKRKKFSIRINLRRKIWVLLKFRARFRKQKEHRS* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1893 1070 PRINTS Disease resistance protein signature 221 236 - -
Mtr6g1893 1070 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g1893 1070 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g1893 1070 PRINTS Disease resistance protein signature 801 817 - -
Mtr6g1893 1070 Gene3D - 355 438 IPR042197 -
Mtr6g1893 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 448 IPR027417 -
Mtr6g1893 1070 Coils Coil 130 150 - -
Mtr6g1893 1070 CDD AAA 198 337 - -
Mtr6g1893 1070 Gene3D - 185 348 IPR027417 -
Mtr6g1893 1070 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mtr6g1893 1070 PANTHER ARCHAEAL ATPASE 28 973 - -
Mtr6g1893 1070 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1893 1070 Pfam NB-ARC domain 203 436 IPR002182 GO:0043531
Mtr6g1893 1070 Pfam TIR domain 18 188 IPR000157 GO:0007165
Mtr6g1893 1070 Gene3D - 13 184 IPR035897 -
Mtr6g1893 1070 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
Mtr6g1893 1070 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 973 IPR044974 GO:0006952
Mtr6g1893 1070 SUPERFAMILY L domain-like 518 846 - -
Mtr6g1893 1070 Gene3D Ribonuclease Inhibitor 713 847 IPR032675 -
Mtr6g1893 1070 Gene3D Ribonuclease Inhibitor 542 712 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1893 Mtr-Chr6 34298345 34304412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1893 12 820 WRKY Transcription Factor Family AT4G12020 27.305 5.82e-60 223