Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1892 ATGGCTATACAATCACCTTCCTCATCCTCTTCATTTTCCTATGGGTTTAAATACCAAGTGTTCCTCAGTTTTAGGGGCATTGACACCCGGCACGGTTTTACCGGCAATCTCTACAAGGCTCTTATTGATAAGGGAATCCATACTTTCATTGATGACAATGATCTTCTCAGAGGAGATGAAATCACACCATCACTCGTTAAGGCCATTGAAGAATCCAGGATTTTTATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCATTGCTATAAGACAAAGGGTTGTTCGGTTTTGCCTGTTTTCTATGGTGTGGATCCTACTCACATACGACATCAGACTGGAAGTTACGGTGAGCATCTTACTAAGCATGAAAAGAAGTTCCAAAATAACAAGGAAAACATGCAGAGGTTGGAGCAATGGAAGATGGCTCTGACCAAAGCTGCCAACTTGTCTGGCTACCATTGTAGTCAAGGATATGAATACAAGTTTATTGAGAATATAGTCAAAGACATCTCCGACAAGATCAATCGTGTTTTTTTACATGTTGCCAAATACCCTGTTGGATTAGAGTCTCGAGTACAACAAGTGAAATTGCTTCTTGATAAGGGATCTAAGGATGAGGTTCTCATGGTAGGACTTTATGGTACTGGAGGCATGGGTAAATCAACACTTGCCAAAGCAATTTATAATTTTGTCGCTGATCAATTTGAAGGTGTATGTTTTCTTCACAATGTCAGAGAGAATTCAGCTCATAATAATTTGAAACATCTCCAGGAGGAGCTCCTTTCAAAAACTGTTAGAGTGAATATTAAGTTAGGAGATGTTAGTGAGGGAATTCCAATCATAAAGGAAAGACTATCTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTGACAAACTGGAGCAGCTAGAGGCTTTGGCAGGAGGACTTGATTGGTTCGGTTGTGGAAGCAGAGTCATCATTACCACTAGAGATAAACACTTGCTAAACTGTCACGGGATAGAAATAACATATGCCGTAAAAGGGCTATATGGGACAGAAGCACTTGAATTGTTGAGATGGATGGCTTTTAGAGACAATGTTCCTTCAGGTTATGAAGAAATTTTAAGCCGTGCAGTTTCATATGCTTCAGGACTTCCCTTAGTTATAGAAGTAGTGGCTTCAAACTTGTTTGGAAAGAGCATCGAAAAATGGAAGAGTACATTAGATGGATATGAAAAGATTCCCAATAAAAAGATTCAAGAGATACTTAAAGTAAGCTATGATGATTTGGAGGAAGAGGAGCAAAGTGTCTTTTTAGATATAGCTTGTTTTTTCAAAGGATGTAGATTGAGTGAGGTCGAAGAGACACTTCTTGCTCACTATGGTCATTGCATAAAACATCATGTTGGAGTGTTGGTTGAAAAATCTCTCATAGAGATTAATACACAAAGCCATCGGTCATATAATGATGATGTGGCATTACACGATTTGATAGAGGACATGGGTAAAGAAATCGTCCGACAAGAATCAAGTAAAGAGCCCGGAGAACGTAGTAGGTTATGGTGTCACAATGACATAGTTCATGTTTTACAGAAAGATACCGGAACCAGTAACATTGAAATGATATATCTGAATTGTCCCTCGATGGAAACCATAATAGACTGGAATGGAAAGCCCTTCAGGAAGATGACAAATCTCAAAACTCTTATCATTGAAAATGGCCGTTTTTCTAAAGGTCCAAAACATCTTCCAAGTAGTTTGAGATTTTTGAAATGGAAAGGATGTCCTTCGAAGTCTCTATCATCTTGTATTTCAAACAAGGAGTTCAATAATATGAAATTCATGACATTGGACGATTGTGAATATTTAACCCATATACCCAATGTCTCAGGTCTCTCAAATTTAGAAAAGTTCTCATTTCGAAATTGTGCTAATTTAATTACAATTCACAATTCAGTTGGATACCTAAATAAACTTGAAATCTTAGATGCATATGGTTGCAGAAAGATCGTAAGTTTTCCACCCTTACGGCTTCCCTCTCTTAAGGAATTTCAACTCAGTTGGTGTAAGAGTCTCAAGAAATTTCCAGAATTACTATGCAAGATGTCAAATATAAGAGAAATTCAGTTAATTGAATGTCTTGACGTAGAAGAATTTCCATTTCCATTTCAAAATCTCAGTGAACTTAGTGATTTAGTGATAAACAGATGTGAAATGCTCAGGTTCCCAAGACACGATGATAAATTGGATTTCATAGTGTTTTCAAATGTGCAAATGCTCGATCTCAATAACAGCAATCTCTCAGATGACTGTCTTCCAATACTTCTCAAGTGGTGTGTTAATGTGAAATATCTAAACTTATCAAAGAACAATTTCAAAATTCTACCCGAGTGCCTTAGTGAATGTCACCTTCTTAAGCATCTTTATTTGGATAAATGCCAATATCTTGAGGAAATTAGAGGGATTCCACAGAATCTCGAACACTTGGATGCAGTGAACTGTTATTCATTGACATCCTCATGTAGAAGAATGTTATTGAGCCAGAAACTACATGAGGCTGGATGTACTCGTTATTATTTTCCAACCGGGGCTGAGAGGATCCCAGATTGGTTCGAGCACCAAATCAGGGGACAAACAGTTTCTTTCTGGTTTCGTAAAAAGATCCCTTCTATTATTTGTATTCTTCTTCTTCCGGGATCTAAGCTGATTCCAAGATTCAATTTGTTTATCAATGGCCGTAGAGGTGATTATTCTACTGATTATTTATCGTCTTGTCCCTCTTACATGAATCTGTCAGAACATACATTTTTGTTTGATCTGACTTTGGAAGAAACCAGTGAACATTTCAGTCCCACGTCTGAAATGGACAATGCACTTTTAAAAAATGAATGGATCCATATCGAGCTTAAGTTGGAGAATTTCAATCTTCCTGAAATAGAGATAAAAAAATTAAGCAGTGCGCAAATTGGAATCCATGTGTTGAAGGAGAAAAGCAACACGGATGAGGATATGATATTCAGCAGTCGTAATAGAAAGCGAAAATTAGATGAAGATGTCAATGCTTCATTACCACAATTTCATCCTGCGCAGAAAAAGCATAGATTTGTGGAAGTGGAACTTACAGAGACAGAAATTTTGCAGCAACAGTATCTAGCTTTAGTGTCAGACATGCAGAACTTGGTGCTTACTGAAACAAAAGAAAAGGAACACCATCTAGCTTTAGTGTCAGGCATGCACAACTTGGTGCTTATTGAAACAAAAGAAAAGGAACACTGTGACTAG 3297 0.3743 MAIQSPSSSSSFSYGFKYQVFLSFRGIDTRHGFTGNLYKALIDKGIHTFIDDNDLLRGDEITPSLVKAIEESRIFIPIFSANYASSSFCLDELVHIIHCYKTKGCSVLPVFYGVDPTHIRHQTGSYGEHLTKHEKKFQNNKENMQRLEQWKMALTKAANLSGYHCSQGYEYKFIENIVKDISDKINRVFLHVAKYPVGLESRVQQVKLLLDKGSKDEVLMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHNVRENSAHNNLKHLQEELLSKTVRVNIKLGDVSEGIPIIKERLSRKKILLILDDVDKLEQLEALAGGLDWFGCGSRVIITTRDKHLLNCHGIEITYAVKGLYGTEALELLRWMAFRDNVPSGYEEILSRAVSYASGLPLVIEVVASNLFGKSIEKWKSTLDGYEKIPNKKIQEILKVSYDDLEEEEQSVFLDIACFFKGCRLSEVEETLLAHYGHCIKHHVGVLVEKSLIEINTQSHRSYNDDVALHDLIEDMGKEIVRQESSKEPGERSRLWCHNDIVHVLQKDTGTSNIEMIYLNCPSMETIIDWNGKPFRKMTNLKTLIIENGRFSKGPKHLPSSLRFLKWKGCPSKSLSSCISNKEFNNMKFMTLDDCEYLTHIPNVSGLSNLEKFSFRNCANLITIHNSVGYLNKLEILDAYGCRKIVSFPPLRLPSLKEFQLSWCKSLKKFPELLCKMSNIREIQLIECLDVEEFPFPFQNLSELSDLVINRCEMLRFPRHDDKLDFIVFSNVQMLDLNNSNLSDDCLPILLKWCVNVKYLNLSKNNFKILPECLSECHLLKHLYLDKCQYLEEIRGIPQNLEHLDAVNCYSLTSSCRRMLLSQKLHEAGCTRYYFPTGAERIPDWFEHQIRGQTVSFWFRKKIPSIICILLLPGSKLIPRFNLFINGRRGDYSTDYLSSCPSYMNLSEHTFLFDLTLEETSEHFSPTSEMDNALLKNEWIHIELKLENFNLPEIEIKKLSSAQIGIHVLKEKSNTDEDMIFSSRNRKRKLDEDVNASLPQFHPAQKKHRFVEVELTETEILQQQYLALVSDMQNLVLTETKEKEHHLALVSGMHNLVLIETKEKEHCD* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1892 1098 Pfam NB-ARC domain 200 433 IPR002182 GO:0043531
Mtr6g1892 1098 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mtr6g1892 1098 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr6g1892 1098 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 976 IPR044974 GO:0006952
Mtr6g1892 1098 CDD AAA 197 336 - -
Mtr6g1892 1098 Gene3D - 187 346 IPR027417 -
Mtr6g1892 1098 SMART till_3 17 160 IPR000157 GO:0007165
Mtr6g1892 1098 Gene3D - 354 436 IPR042197 -
Mtr6g1892 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 446 IPR027417 -
Mtr6g1892 1098 PANTHER ARCHAEAL ATPASE 28 976 - -
Mtr6g1892 1098 SUPERFAMILY L domain-like 499 844 - -
Mtr6g1892 1098 SMART AAA_5 217 351 IPR003593 -
Mtr6g1892 1098 PRINTS Disease resistance protein signature 220 235 - -
Mtr6g1892 1098 PRINTS Disease resistance protein signature 295 309 - -
Mtr6g1892 1098 PRINTS Disease resistance protein signature 387 401 - -
Mtr6g1892 1098 PRINTS Disease resistance protein signature 681 697 - -
Mtr6g1892 1098 Pfam TIR domain 17 186 IPR000157 GO:0007165
Mtr6g1892 1098 Gene3D - 16 186 IPR035897 -
Mtr6g1892 1098 Gene3D Ribonuclease Inhibitor 527 681 IPR032675 -
Mtr6g1892 1098 Gene3D Ribonuclease Inhibitor 682 751 IPR032675 -
Mtr6g1892 1098 Gene3D Ribonuclease Inhibitor 752 862 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1892 Mtr-Chr6 34257717 34262046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1892 12 813 WRKY Transcription Factor Family AT4G12020 28.421 9.20e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1892 - - mtr:MTR_6g072590 1362.82