Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1891 ATGGCTATGCAATCTCCTTCCTATTCCTCTTCCTCTTTAATTTCCTACGGATTCACCTACCAGGTCTTCCTCAACTTCAGGGGCAGTGACACTCGTGACGGTTTTACTGGACATCTCTACAAGGCTCTTACTGACAAGGGAATTCACACCTTCATTGATGATTGTGATCTTAAGAGAGGAGATGAAATCACACCATCACTCATCAAGGCCATTGAAGAATCTAGGATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCTAAATTTTGTTTGGACGAACTTGTCCACATCATTCATTGCTACAAGACAAAGGGTCGTCTCGTTTTGCCCGTTTTCTATGGCGTGGATCCTACTCAGATACGGCATCAAAGTGGGAGTTATGGTGAACATCTCACTAAGCACGAAGAGAGTTTCCAAAATAACAAGAAAAACAAGGAACGATTGCATCAATGGAAGTTGGCTCTGACCCAAGCTGCTAACTTGTCCGGATACCATTATAGTCCTGGATATGAATACAAGTTTATTGGGAAGATAGTCGAAGACATCTCCAACAAGATCAATCGTGTCATTTTACATGTAGCCAAATACCCTGTTGGATTAGAGTCCCGATTAGAACAAGTGAAATTGCTTCTTGATAAAGAATCTGATGAAGGGGTCCATATGGTAGGACTTTATGGTACTGGAGGTTTGGGTAAATCAACACTTGCCAAAGCGATTTATAATTTTGTTGCTGATCAATTTGAAGGTGTATGCTTTCTTCATAATGTCAGAGAGAATTCAGCTCATAATAACTTGAAACATCTCCAGAAGGAGCTCCTTTCAAAAACAGTTAAAGTGAACATTAAGTTTGGACATATTTGTGAGGGAATTCCAATCATTAAGGAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTAACCAACTGGATCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTCCTGGAAGCAGAGTCATCATCACCACCCGAGATAAACACTTACTAACCTGTCATGGGATAGAAAGAACATATGCAGTAAGAGGGCTATATGGGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCGTTTAAGAATAACAAAGTACCGCCAAGTTATGAAGACGTTTTAAACCGTGCAGTTTCATATGCTTCAGGCCTTCCCTTAGTTTTAGAAATAGTGGGTTCCAACTTATATGGAAAGAGCATAGAAGAATGGAAGGGTACATTAGATGGATATGAAAAGATTCCCAATAAAAAGATCCACGAGATACTTAAAGTAAGCTATGATGCTTTGGAGGAAGAGCAGCAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGATGTAGATGGGAGGAGTTTGAAGATATACTTCGTTATCATTATGGCCATTGCATAACACATCATCTTGGAGTGTTGGCTGAAAAATCTCTCATTTACCAAAATCATGGTTATCTGAGATTACATGACTTGATAAAGGACATGGGTAAGGAAGTAGTCCGACAAGAATCACGTAAAGAGCCTGGAGAACAAAGTAGGTTATGGTGTCAAGATGAAATAGTTCATGTTTTAAAAGAAAACACTGGAACTAGTAAAATTGAAATGATATATATGAATTTCCACTCCATGGAATCCGTAATAGACCAGAAAGGAAAGGCCTTCAAGAAGATGACAAAACTCAAAACACTTATCATTGAAAATGGTCATTTTTCTAAAGGTCTTAAATATCTTCCAAGCAGTTTGAGAGTATTGAAATGGAAAGGATGTTTATCAGAGTCTCTATCATCTAGTATTTTAAGCAAGAAGTTCCAGAATATGAAAGTCTTGACATTGAACTGTTGTGAATATTTAACTCATATACCTGATGTCTCAGATCTTCAAAATTTAGAAAAGTTCTCATTTATGTTTTGTAAGAATTTAATTACAATTGACGACTCAATTGGGCACCTAAATAAACTTGAAAGCTTAGATGCAGGTTGTTGCAGCAAGCTCAAGCGTTTTCCACCCTTAGGGTTGACATCTCTTAAGCAATTGGAACTCAGTGGTTGTGAGAGTCTAAAGAATTTTCCAGAATTATTATGCAAAATGAGAAATATAAAACATATTTTTTTGTCTAGAACTTCAATAGGAGAATTGCCATCTTCATTTCATAATCTCAGTGAACTTCGTAGTTTACACATATTTGGAATGTTTAGGTTCCCAAAACCTAATGATAAAATTTATTCTGTAGTGTTTTCAAATGTGGATCATCTTGTTCTCGAAAATTGCAACCTCTTTGATGAAAGTCTCCTAATAATTCTCAAATGGTGTGTTAATCTGAAAAATCTAGTCTTAGCAAAGAACAATTTCAAAATTCTTCCCGAGTTCCTTAGTGAATGTCACCATCTTGTTGAAATTATCGTGGACGGCTGTACCTCTCTTGAGGAAATTAGGGGGATTCCACCAAATCTTAAATGGCTTTCTGCATTGAGATGTGAATCATTGAGTTCCTCAAGTAGAAGAATGTTATTGAGTCAGAAACTACACAAGGCTGGATGCATTGAGGAGATTCTTATGCCAAACGGAATAGAGGGGATTCCAGATTGGTTCGAACACCAAATCGTTAGGGGAGACACAATTTCTTTTTGGTTTCGTAAAAATATCCCTTCTATAACATGTATCATTGTTATTCCGGAATCTGTGGAAATTGAAAAATTCAATGTGTTTCTCAATGACAAGGAAATTACTACTATGGAGTGTTTATTATATCCTAAAGATATCTCGCCGGGACATTCAATTTTGTTTGATATGAAATTGGATGAGAATATTTACGAGAGTTTTGCAAATAAGTCTGAACTGTACGGAGCATTTAAAAATAATGAATGGAACCATGTGGAGCTTATTTGGAAGTTATATTATTGGAGTGACATGGAGGAGGATGATTGGAGTGACACGGAGGAGGGTGAGAAAGAGATGATCATATTAAGCAGTGGTGTACAGATGGGAATCCACGTGTCGTGGAATGGGTATGATTGGAGTGACACGGAGGTGGAGAAAAGCAACAAGGAGGGGGAAGTGAGATTCACTAATCCTTATAGTAGAAAGAGAAAACTTGATGAATATCTTTTCATTTACAGCAATACTTTATTATCACAATTTGTGCCTCCTCTAAAAAAGCAAAGATTGGTGGAAGTGGGAGTTTCAAAGACAGAAATTTTGCAGCAGCATAATCTAGTAGCTTTAGTGTCAGACATGCGGGATTTGGTCCTCACTGAAACAAAACAAAAGGAACATCATGGCTAG 3303 0.3754 MAMQSPSYSSSSLISYGFTYQVFLNFRGSDTRDGFTGHLYKALTDKGIHTFIDDCDLKRGDEITPSLIKAIEESRIFIPVFSINYASSKFCLDELVHIIHCYKTKGRLVLPVFYGVDPTQIRHQSGSYGEHLTKHEESFQNNKKNKERLHQWKLALTQAANLSGYHYSPGYEYKFIGKIVEDISNKINRVILHVAKYPVGLESRLEQVKLLLDKESDEGVHMVGLYGTGGLGKSTLAKAIYNFVADQFEGVCFLHNVRENSAHNNLKHLQKELLSKTVKVNIKFGHICEGIPIIKERLCRKKILLILDDVNQLDQLEALAGGLDWFGPGSRVIITTRDKHLLTCHGIERTYAVRGLYGTEALELLRWMAFKNNKVPPSYEDVLNRAVSYASGLPLVLEIVGSNLYGKSIEEWKGTLDGYEKIPNKKIHEILKVSYDALEEEQQSVFLDIACCFKGCRWEEFEDILRYHYGHCITHHLGVLAEKSLIYQNHGYLRLHDLIKDMGKEVVRQESRKEPGEQSRLWCQDEIVHVLKENTGTSKIEMIYMNFHSMESVIDQKGKAFKKMTKLKTLIIENGHFSKGLKYLPSSLRVLKWKGCLSESLSSSILSKKFQNMKVLTLNCCEYLTHIPDVSDLQNLEKFSFMFCKNLITIDDSIGHLNKLESLDAGCCSKLKRFPPLGLTSLKQLELSGCESLKNFPELLCKMRNIKHIFLSRTSIGELPSSFHNLSELRSLHIFGMFRFPKPNDKIYSVVFSNVDHLVLENCNLFDESLLIILKWCVNLKNLVLAKNNFKILPEFLSECHHLVEIIVDGCTSLEEIRGIPPNLKWLSALRCESLSSSSRRMLLSQKLHKAGCIEEILMPNGIEGIPDWFEHQIVRGDTISFWFRKNIPSITCIIVIPESVEIEKFNVFLNDKEITTMECLLYPKDISPGHSILFDMKLDENIYESFANKSELYGAFKNNEWNHVELIWKLYYWSDMEEDDWSDTEEGEKEMIILSSGVQMGIHVSWNGYDWSDTEVEKSNKEGEVRFTNPYSRKRKLDEYLFIYSNTLLSQFVPPLKKQRLVEVGVSKTEILQQHNLVALVSDMRDLVLTETKQKEHHG* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1891 1100 CDD AAA 199 338 - -
Mtr6g1891 1100 Pfam NB-ARC domain 202 437 IPR002182 GO:0043531
Mtr6g1891 1100 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 165 IPR035897 -
Mtr6g1891 1100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 968 IPR044974 GO:0006952
Mtr6g1891 1100 PRINTS Disease resistance protein signature 222 237 - -
Mtr6g1891 1100 PRINTS Disease resistance protein signature 297 311 - -
Mtr6g1891 1100 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g1891 1100 PRINTS Disease resistance protein signature 677 693 - -
Mtr6g1891 1100 SUPERFAMILY L domain-like 518 849 - -
Mtr6g1891 1100 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Mtr6g1891 1100 Gene3D - 356 439 IPR042197 -
Mtr6g1891 1100 Gene3D - 18 188 IPR035897 -
Mtr6g1891 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 449 IPR027417 -
Mtr6g1891 1100 Gene3D Ribonuclease Inhibitor 523 873 IPR032675 -
Mtr6g1891 1100 Gene3D - 189 348 IPR027417 -
Mtr6g1891 1100 SMART till_3 19 162 IPR000157 GO:0007165
Mtr6g1891 1100 Pfam TIR domain 20 188 IPR000157 GO:0007165
Mtr6g1891 1100 PANTHER ARCHAEAL ATPASE 30 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1891 Mtr-Chr6 34248313 34253610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1891 6 807 WRKY Transcription Factor Family AT4G12020 28.788 4.38e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1891 - - mtr:MTR_6g071935 2150.94