Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1889 ATGGCTATGCAATCACCATCCTCTTCCTCTTCAATTTCCTATCAATTCAAATACCAAGTGTTCCTAAGTTTCAGAGGCAGTGACACTCGGTACGGTTTCACTGGAAATCTCTACAAGGCTCTTACTGACAAGGGAATCCACACCTTCATTGATGATCGTGAACTTCAAAGAGGGGACGAAATCAAACCATCACTTGACAATGCTATCGAAGAGTCTAGGATTTTTATTCCTGTGTTTTCTCCCAACTATGCATATTCTTCATTTTGTTTGGATGAACTTGTCCACATCATTCACTGCTACAAAACAAAGGGTCGTCTCGTTTTGCCCGTCTTCTATGGCGTGGATCCTACTCACATACGGCATCAAACTGGGAGTTATGGCGAAGCACTTGCTAAGCATGCAAAGAGGTTCCATAATAATAATACATATAATATGGAGAGGTTGCAAAAATGGAAGATAGCTCTTGCACAAGCAGCTAACTTGTCTGGAGACCATCGTCATCCTGGATATGAATACAAGCTTACTAGGAAGATAACTCTTGACCAGACACCGGACTCGTCAAGCGACCATTGTAGTCAAGGATATGAATATGATTTTATTGAAAAGATAGTCAAATACATCTCCAACAAGATCAATCGTGTGCCCTTACATGTTGCTAAATACCCTGTTGGATTACAGTCTCAACTACAACAAGTGAAATCACTTCTTGATAATGGATCTGATGATGGGGTCCATATGGTTGGAATGTATGGGATTGGAGGCTTGGGCAAATCAACACTTGCAAGAGCAATCTATAACTTTGTTGCTGATCAATTTGAAGGTTTATGTTTTCTTCATGATGTGAGAGAGAATTCAGCTCAAAATAACTTGAAACATCTCCAAGAGAAGCTCCTTTTTAAAACAACTGGATTGGAAATTAAGTTGGACCATGTTAGTGAGGGAATTTCAATCATTAAGGAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTAGACAGTATAAGGCAACTGGATGCTTTGGCTGGAGGGCTTGATTGGTTCGGACGTGGAAGCAGGGTCATAATTACCACTCGAAACAAACACCTACTAAGCACTCATGGGATAAAAAGCACACATGCAGTAGAAGGGTTGTATGGGACAGACGGTCATGAATTGTTGAGGTGGATGGCTTTTAAAAGTGACAAAGTTCCTTCAGGTTATGAAGACATTTTAAACCGTGCAGTTGCATATGCTTCTGGCCTTCCGTTAGTTTTAGAAATTGTGGGTTCCAACTTGTTTGGAAAGAGCATAGAAGAATGGAAGTATACATTAGATGGGTATGACAGGATTCCCAATAAAGAGATCCAAAAGATACTTAAAGTGAGCTATGATGCTTTGGAAGAAGAGGAGCAGAGTGTCTTTCTAGATATTGCTTGTTGCTCGAAAGGATGTGGATGGAGGGAGTTCGAAGATATGCTTCGTGCTCATTATGGCCATTGCATAACACATCATCTAGGAGTGTTGGTTGACAAATGTCTCATATATCAATCTTATGGTGATATGACCTTACATGACTTGATAGAGGACATGGGTAAAGCAATCGTCCGACAAGAATCACCTAAAGAGCCTGGAGAACGAAGTAGATTATGGTGTCAAGATGATATATTTCATGTTTTAAAAGAAAACAGTGGAACTAGTAAAATTGAAATGATATATATGAATTTTCCCTCTATGGAATCCGTAATAGACCAGAAAGGAAAGGCCTTCAGGAAGATGACAAAACTCAAAACACTTATCATTGAAGATGGTCGGTTTTCTAAAGGTCTCAAGTATCTTCCAAGCAGTTTGAGAGTATTGAAATGGAAAGGATGTTTATCGGAGTCTCTATCAGCTAGTTTTTTGAACAAGAAGTTCCAGAATATGAAAGTATTAACATTGGACGAATGTGAACATTTAACACATATACCCGATATCTCAGGCCTTTCAAATTTACAAAAGTTGACATTTAATTTTTGTAAAAATTTAATTACAATTGATGACTCAATTGGGCACCTAAATAAACTTGAACTAGTAAGTGCATCCTGTTGCAAAAAGCTCGAGAACTTTCCACCCTTATGGTTGGTATCTCTTAAGAATTTGGAACTCTCTCTCCACCCTTGTGTTTCGGGAATGCTGAGGTTCCCAAAACATAATGATAAAATGTATTCAAATGTGACAGAGCTTTGTCTCAGGGAATGCAACCTCTCAGATGAATATCTCCCAATAATTCTCAAGTGGTTTGTTAATGTGAAACATCTAGACTTATCGGAGAACGTCGGTATCAAAATTCTTCCTGAATGCCTTAATGAATGTCACCTTCTTAGGATCCTTAATTTAGATGGCTGCGAGTCTCTTGAGGAAATTAGAGGGATTCCACCAAATCTAAATTACTTGTCTGCAACGGAATGCTTATCATTGAGTTCCTCAACTAGAAGAATGTTATTAAGTCAGAAAGTACATGAGGCTGGATGCACCAATATTCGTTTCCATAACGCCAAAGAGGGGATTCCAGATTGGTTCGAGCATCAAATCAGGGGACACAACACAATTTCTTTCTGGTTTCGTAAAAAGATCCCTTCTATTACTTCTTTTCTTTATTTTAAAGGAGAAGATATGATTGCAGGTGTCCATTTGTTTGTCAATGGATATGAATGTCCTTTAGAATCATGTGAATATTTATTGTGTGGATCTTACTCGTTTGCGGGCTTGTACACAAAACATGCATATTTGTTTGATCTGAAATTGGAAGAAAAGATTAAATGCTGTGGGATTAAATTTGAGTCTGAAATGGACAAAACACTTTTAAAAAATGAATGGATCCATGTGGAGCTTAGGTATAGAATTATTTACGATAAGATTAAAATATTAAGGAGTGCACAAATGGGAATCCATGTGTTGAAGGAGAAAAGCAACACAGATGAGGATGTCATATTCACCAATCCTTATCGTCACTTCGACAACAAATGGATTGATGGAAATGGGGCTTTCAGAGATTATAGCAATACTTCATTATCACAGTTTGAGCCTCCTCTGAAAAAGCAAAGATTGGTGGAAATGGGAGTTTCAGAGACAGAAAGTTTGCAGCAGCAGCAACATCTAGCTTTACTGTCACAGCAACAACAAATGGCTTTATTACCACAGCAACAACGTATAACTGTTTTGTCAGGCATGTGGAATTTGGTGCTGAATGAAACAAAAGAAAAGGAACAACATGACTGGATTCCTTAG 3255 0.3825 MAMQSPSSSSSISYQFKYQVFLSFRGSDTRYGFTGNLYKALTDKGIHTFIDDRELQRGDEIKPSLDNAIEESRIFIPVFSPNYAYSSFCLDELVHIIHCYKTKGRLVLPVFYGVDPTHIRHQTGSYGEALAKHAKRFHNNNTYNMERLQKWKIALAQAANLSGDHRHPGYEYKLTRKITLDQTPDSSSDHCSQGYEYDFIEKIVKYISNKINRVPLHVAKYPVGLQSQLQQVKSLLDNGSDDGVHMVGMYGIGGLGKSTLARAIYNFVADQFEGLCFLHDVRENSAQNNLKHLQEKLLFKTTGLEIKLDHVSEGISIIKERLCRKKILLILDDVDSIRQLDALAGGLDWFGRGSRVIITTRNKHLLSTHGIKSTHAVEGLYGTDGHELLRWMAFKSDKVPSGYEDILNRAVAYASGLPLVLEIVGSNLFGKSIEEWKYTLDGYDRIPNKEIQKILKVSYDALEEEEQSVFLDIACCSKGCGWREFEDMLRAHYGHCITHHLGVLVDKCLIYQSYGDMTLHDLIEDMGKAIVRQESPKEPGERSRLWCQDDIFHVLKENSGTSKIEMIYMNFPSMESVIDQKGKAFRKMTKLKTLIIEDGRFSKGLKYLPSSLRVLKWKGCLSESLSASFLNKKFQNMKVLTLDECEHLTHIPDISGLSNLQKLTFNFCKNLITIDDSIGHLNKLELVSASCCKKLENFPPLWLVSLKNLELSLHPCVSGMLRFPKHNDKMYSNVTELCLRECNLSDEYLPIILKWFVNVKHLDLSENVGIKILPECLNECHLLRILNLDGCESLEEIRGIPPNLNYLSATECLSLSSSTRRMLLSQKVHEAGCTNIRFHNAKEGIPDWFEHQIRGHNTISFWFRKKIPSITSFLYFKGEDMIAGVHLFVNGYECPLESCEYLLCGSYSFAGLYTKHAYLFDLKLEEKIKCCGIKFESEMDKTLLKNEWIHVELRYRIIYDKIKILRSAQMGIHVLKEKSNTDEDVIFTNPYRHFDNKWIDGNGAFRDYSNTSLSQFEPPLKKQRLVEMGVSETESLQQQQHLALLSQQQQMALLPQQQRITVLSGMWNLVLNETKEKEQHDWIP* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1889 1084 PRINTS Disease resistance protein signature 246 261 - -
Mtr6g1889 1084 PRINTS Disease resistance protein signature 321 335 - -
Mtr6g1889 1084 PRINTS Disease resistance protein signature 414 428 - -
Mtr6g1889 1084 PRINTS Disease resistance protein signature 632 648 - -
Mtr6g1889 1084 SUPERFAMILY L domain-like 532 824 - -
Mtr6g1889 1084 Pfam TIR domain 17 213 IPR000157 GO:0007165
Mtr6g1889 1084 PANTHER ARCHAEAL ATPASE 28 955 - -
Mtr6g1889 1084 CDD AAA 223 360 - -
Mtr6g1889 1084 Pfam NB-ARC domain 227 462 IPR002182 GO:0043531
Mtr6g1889 1084 Gene3D Ribonuclease Inhibitor 718 842 IPR032675 -
Mtr6g1889 1084 Gene3D - 382 463 IPR042197 -
Mtr6g1889 1084 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 955 IPR044974 GO:0006952
Mtr6g1889 1084 Gene3D - 208 373 IPR027417 -
Mtr6g1889 1084 Gene3D - 15 207 IPR035897 -
Mtr6g1889 1084 Gene3D Ribonuclease Inhibitor 555 717 IPR032675 -
Mtr6g1889 1084 SMART AAA_5 243 382 IPR003593 -
Mtr6g1889 1084 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mtr6g1889 1084 ProSiteProfiles TIR domain profile. 16 211 IPR000157 GO:0007165
Mtr6g1889 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 473 IPR027417 -
Mtr6g1889 1084 SMART till_3 17 161 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1889 Mtr-Chr6 34220948 34230539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1889 18 820 WRKY Transcription Factor Family AT4G12020 27.574 4.76e-62 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1889 - - mtr:MTR_6g071935 1274.23