Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1864 ATGGCGCTTGTCCACCGCCGCAACAGCCCTAAACTCCGGCTACCAGAAATCTCCGACCACCGTCCTCGTTTCCCTGTCCCTCTTCCTGCCAACATCTACAAACAACCCTCCACTTCAGCCACCACCGCCTCCGTTGCCGGTGGTGACAATATTAGTGCCGGTGACTTTGAAAAACTCTCCGTTCTCGGTCATGGCAACGGCGGCACCGTTTACAAAGTCCGTCACAAACTCACCTCCATCATATACGCTCTCAAAATCAACCATTATGACTCTGACCCCACCACGCGCCGCCGTGCACTCACCGAAGTAAACATCCTCCGTCGCGCAACGGATTGCACCAACGTCGTGAAATACCACGGCTCCTTCGAGAAACCCACTGGCGACGTTTGCATTTTGATGGAATACATGGACTCCGGCAGCCTTGAAACTGCCCTCAAAACAACCGGCACATTCTCCGAATCAAAGCTCTCAACGGTGGCGCGTGACATTTTAAACGGTCTCACGTACCTTCACGCGCGTAACATAGCGCATCGTGACATAAAACCTTCGAACATCCTCGTAAACATCAAAAACGAGGTTAAAATTGCTGATTTTGGTGTCAGTAAATTTATGGGTCGCACGCTTGAAGCATGTAACTCTTATGTTGGCACGTGTGCTTATATGAGTCCTGAAAGATTTGACCCAGAAGTTTATGGAGGGAATTATAACGGTTTTTCAGCTGATATATGGAGTTTAGGTTTAACCCTATTTGAACTTTATGTAGGTTATTTTCCATTTCTTCAATCGGGTCAACGACCCGATTGGGCTTCGCTTATGTGCGCGATTTGCTTCTCTGATCCGCCAAGCCTCCCTGAGACTGCTTCGTCAGAGTTTAGAAACTTTGTCGAATGTTGTCTTAAGAAGGAGTCTGGTGAACGGTGGTCGGCGGCTCAGTTGTTGACCCACCCATTTTTATGTAAAGATATGGAAAGTTAA 975 0.4831 MALVHRRNSPKLRLPEISDHRPRFPVPLPANIYKQPSTSATTASVAGGDNISAGDFEKLSVLGHGNGGTVYKVRHKLTSIIYALKINHYDSDPTTRRRALTEVNILRRATDCTNVVKYHGSFEKPTGDVCILMEYMDSGSLETALKTTGTFSESKLSTVARDILNGLTYLHARNIAHRDIKPSNILVNIKNEVKIADFGVSKFMGRTLEACNSYVGTCAYMSPERFDPEVYGGNYNGFSADIWSLGLTLFELYVGYFPFLQSGQRPDWASLMCAICFSDPPSLPETASSEFRNFVECCLKKESGERWSAAQLLTHPFLCKDMES* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1864 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Mtr6g1864 324 Pfam Protein kinase domain 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1864 324 MobiDBLite consensus disorder prediction 1 20 - -
Mtr6g1864 324 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Mtr6g1864 324 ProSiteProfiles Protein kinase domain profile. 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1864 324 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 6 322 - -
Mtr6g1864 324 CDD PKc_MAPKK_plant_like 55 318 - -
Mtr6g1864 324 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 6 322 - -
Mtr6g1864 324 SUPERFAMILY Protein kinase-like (PK-like) 53 320 IPR011009 -
Mtr6g1864 324 SMART serkin_6 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1864 324 Gene3D Transferase(Phosphotransferase) domain 1 139 324 - -
Mtr6g1864 324 Gene3D Phosphorylase Kinase; domain 1 32 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1864 Mtr-Chr6 33859888 33861218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1864 1 322 MAP Kinase Kinase Gene Family AT1G73500 59.077 7.22e-122 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mtr6g1864 Pkinase 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1864 K20604 - gmx:100804100 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1864 6 33859888 33861218 Mtr6g1864 6 33859888 33861218 ECH