Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1862 ATGAGCAGTGTTGTAGATGTGGTATATCAAAGGTTTTTATTTCATCTACTCAAAAATAGTTATATGGAATCTAAGATGAATAGTTTTGTTGTTGATCATGAGAAGTACAAACAAGAAGAAAATCAAGAAGAATTGGAATTACAACATAAAGAAGGTGGTGTTCATGAACATGATCATCAAGAGGAAAATGATGAGATTCTTAAGACAAGAATCTCTAACCATCCTCTCTATGAACTTCTTGTTCAAGCTCACTTGGATTGTTTGAAGGTTGGTGACATTTCTAACTTGGAGATAGAGAAATCAGATAAAAAGCAAACACTGAAGAAACAAAACTTGGATATGTTAAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTAGTAAGCTAAAAGAAGCAATGAAGGAACCACAACAGAATTCAATGGCTTTCATAAACAACATGCATTCACAACTTAGGGAACTAACTCAGGCAACTTCATCTTCTAGTGAACCAGATGCTACTACATCTTCAAGTGAGTGCACATTCAGAAGAAATCCATCAATTTAG 561 0.3458 MSSVVDVVYQRFLFHLLKNSYMESKMNSFVVDHEKYKQEENQEELELQHKEGGVHEHDHQEENDEILKTRISNHPLYELLVQAHLDCLKVGDISNLEIEKSDKKQTLKKQNLDMLSQSELDLFMEAYCLALSKLKEAMKEPQQNSMAFINNMHSQLRELTQATSSSSEPDATTSSSECTFRRNPSI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1862 186 Coils Coil 93 113 - -
Mtr6g1862 186 SMART KNOX1_2 65 110 IPR005540 GO:0003677|GO:0005634
Mtr6g1862 186 PANTHER FUSED COMPOUND LEAF 1 41 165 - -
Mtr6g1862 186 Pfam KNOX1 domain 67 91 IPR005540 GO:0003677|GO:0005634
Mtr6g1862 186 Pfam KNOX2 domain 117 160 IPR005541 GO:0003677|GO:0005634
Mtr6g1862 186 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 41 165 - -
Mtr6g1862 186 MobiDBLite consensus disorder prediction 159 186 - -
Mtr6g1862 186 SMART KNOX2_2 110 161 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1862 Mtr-Chr6 33827693 33832016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1862 65 162 Homeobox Transcription Factor Family AT4G08150 37.143 2.75e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1862 - - mtr:MTR_6g071190 301.597