Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1853 ATGGCTATGCAATCACCTTCCCGAGTGTTCCTCAGTTTCAGGGGCAGTGACACTCGCAACAAATTTACCGGTAATCTCTATAAGGCTCTTGTTGACAAGGGAATTCGTACTTTCATTGATGATAATGATCTTGAAAGAGGAGATGAAATCACACCATCACTTGTCAAGGCCATTGAAGAATCTAGGATTTTTATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGAGTTGCTTAGTATTTCCCGTTTTCTATGATGTGGAACCTACTCACATACGAAATCAGAGTGGGATTTATGGTGAGCATCTTACTAAGCATGAAGAGAGGTTTCAAAATAACGAGAAAAACATGGAGCGATTGCGTCAATGGAAGATAGCTCTTATCCAAGCTGCTAACTTGTCCGGCTATCATTATAGTCCTCATGGATATGAATACAAGTTTATTGAGAAGATAGTCGAAGACATCTCCAACAATATCAATCATGTTTTTTTAAATGTAGCCAAATACCCTGTTGGATTACAGTCCCGAATAGAAGAAGTGAAATTGCTTCTTGACATGGGCTCTGAGGATGAGGTCCGCATGGTAGGACTTTTTGGTACTGGAGGCATGGGTAAATCAACACTTGCAAAAGCAGTTTATAATTTTGTTGCTGATCAATTTGAAGGTGTATGTTTTCTTCATAATGTCAGAGAGAATTCAAGTCATAATAACCTGAAACATCTCCAGGAAGATCTCCTTTTAAGAACAGTTAAATTGAACCATAAGTTAGGAGATGTTAGTGAGGGAATTTCAATCATTAAGGAAAGACTATCTAGAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAACTGGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTCATGGAAGCAGGGTCATCATTACCACTCGTGATAAACACTTACTAGCCTGTCATGGGATTACAAGTACACATGCAGTAGAAGAATTGAATGAGACAGAAGCTCTTGAATTGTTGAGGCGAATGGCTTTTAAAAATGACAAAGTTCCTTCAAGTTATGAAGAAATTTTAAACCGTGTAGTTACTTATGCATCTGGCCTGCCCTTAGCAATAGTAACAATAGGGGGCAATTTGTTTGGAAGGAAGGTAGAAGATTGGGAGCGTACATTAGACGAGTATGAAAATATTCCCGATAAAGATATCCAAAGGATACTTCAAGTAAGCTATGATGCTTTGAAGGAAAAGGATCAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGGTGTGAATGGACAAAGGTTAAAAAAATACTTCATGCTCATTATGGCCATTGCATAGAACATCATGTTGGAGTGTTGGCTGAAAAATCTCTCATAGGCCATTGGGAATATGACACTTATGTGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAATCGTCCGACAAGAATCTCCCAACAAGCCTGGAGAACGCAGTAGGTTGTGGTTTCCCGATGATATAGTTAACGTTTTAAGAGATAATACAGGAACTGGGAATATTGAAATGATATATTTAGAATTTGACTCAACGGCAAGAGAAACAGAGTGGGATGGAATGGCTTGCAAGAAGATGACAAATCTCAAAACACTTATCATTGAATATGCTAACTTTTCAAGGGGTCCTGGGTATCTTCCAAGTAGTTTGAGATATTGGAAATGGATATTCTGTCCTTTGAAGTCTCTATCTTGTATTTCGAGCAAGGAGTTCAACTATATGAAAGTCTTGACATTGAACTATTCTCGATATTTAACCCATATACCCGATGTCTCAGGTCTTCCAAATCTAGAAAAGTGCTCCTTTCAAAACTGTGAAAGTTTAATTAGAATTCACAGTTCGATTGGACACCTAAATAAACTTGAAATCTTAAATGCATCTGGTTGCAGCAAGCTTGAGCATTTTCCACCCTTACAGCTGCTCTCTCTTAAGAAATTCAAAATCTCTCATTGTGAGAGTCTCAAGAAAATTACAATTCACAACTCGATTGGACACCTAAATAAACTTGAAATCTTAAATACATCTAATTGCCTCAAACTTGAGCATTTCCCACCCTTACAGCTGCCCTCTCTTAAGAAATTTGAAATCTCTGGTTGTGAGAGTCTCAAGAATTTTCCAGAATTATTATGTAAGATGACAAATATAAAAGATATTGAGATATATGATACTTCCATAGAAGAATTGCGATATTCATTTCAAAATTTCAGTGAACTTCAACGGTTAACAATATCTGGAGGGGGAAAGCTCAGGTTCCCAAAATATAATGATACAATGAATTCAATAGTGTTTTCAAATGTGGAACATGTTGACCTCAGAGACAACAACCTCTCGGATGAATGTCTCCCAATACTTCTCAAGTGGTTTGTTAATGTGACATTTCTAGACTTATCGGAGAACTATTTCACAATTCTTCCCGAGTGCCTTGGTGAATGTCACCGTCTTAAGCATCTTTATTTGAAGTTTTGCGAGGCTCTTGAGGAAATTAGAGGGATTCCACCAAATCTTGAAAGGCTTTGTGCAGACGAGTGTTATTCATTGAGTTCCTCAAGTATAAGAATGTTAATGAGTCAGAAACTGCATGAGTCTGCTGGATGCACCCATTTTCGATTCCCAAACAAAACGAGAAGGATTCCTGATTGGTTTGAGCACCAAAGCAGGGGAGGCAAAATTGCTTTCTGGTATCATAAAAAACTCCCTTCTATTAGTTTTACTTTTATTATTATTTATGAGCACTACACAACAGTCAAATTATTTGTGAATGGATATGAAAAAGAGATAAGTTTCGACGAATTCACTGGGGAATTCGGTAAGCTAGTGGATGATGAAACTGTGTTGGATAACTATACAACTTTGTTGCATATAAAATTGGAAGAAGGTAATGAACTCGGTGAAAGACTTTTGAAAAAGGAATGGATCCATGTGGAGTTTAAGTTGAAGGATCACGAGAATAGTGTTTATGCACAAATGGGAATCCACGTGTGGGGAATTGATCCTTCATTATCACAATTTATGCAAGAGGGAATTGATCCTTCAATATTATATCCTCAAAAAAAGCAAAGATTGGTGGAAGTGGGAGTTTCAGAGAAAGGGGAGGAGGAGGAGGAGGGATGA 3195 0.3781 MAMQSPSRVFLSFRGSDTRNKFTGNLYKALVDKGIRTFIDDNDLERGDEITPSLVKAIEESRIFIPIFSANYASSSFCLDELVHIIHCYKTKSCLVFPVFYDVEPTHIRNQSGIYGEHLTKHEERFQNNEKNMERLRQWKIALIQAANLSGYHYSPHGYEYKFIEKIVEDISNNINHVFLNVAKYPVGLQSRIEEVKLLLDMGSEDEVRMVGLFGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVRENSSHNNLKHLQEDLLLRTVKLNHKLGDVSEGISIIKERLSRKKILLILDDVDKLEQLEALAGGLDWFGHGSRVIITTRDKHLLACHGITSTHAVEELNETEALELLRRMAFKNDKVPSSYEEILNRVVTYASGLPLAIVTIGGNLFGRKVEDWERTLDEYENIPDKDIQRILQVSYDALKEKDQSVFLDIACCFKGCEWTKVKKILHAHYGHCIEHHVGVLAEKSLIGHWEYDTYVTLHDLIEDMGKEIVRQESPNKPGERSRLWFPDDIVNVLRDNTGTGNIEMIYLEFDSTARETEWDGMACKKMTNLKTLIIEYANFSRGPGYLPSSLRYWKWIFCPLKSLSCISSKEFNYMKVLTLNYSRYLTHIPDVSGLPNLEKCSFQNCESLIRIHSSIGHLNKLEILNASGCSKLEHFPPLQLLSLKKFKISHCESLKKITIHNSIGHLNKLEILNTSNCLKLEHFPPLQLPSLKKFEISGCESLKNFPELLCKMTNIKDIEIYDTSIEELRYSFQNFSELQRLTISGGGKLRFPKYNDTMNSIVFSNVEHVDLRDNNLSDECLPILLKWFVNVTFLDLSENYFTILPECLGECHRLKHLYLKFCEALEEIRGIPPNLERLCADECYSLSSSSIRMLMSQKLHESAGCTHFRFPNKTRRIPDWFEHQSRGGKIAFWYHKKLPSISFTFIIIYEHYTTVKLFVNGYEKEISFDEFTGEFGKLVDDETVLDNYTTLLHIKLEEGNELGERLLKKEWIHVEFKLKDHENSVYAQMGIHVWGIDPSLSQFMQEGIDPSILYPQKKQRLVEVGVSEKGEEEEEG* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1853 1064 PANTHER ARCHAEAL ATPASE 659 1007 - -
Mtr6g1853 1064 PANTHER ARCHAEAL ATPASE 17 666 - -
Mtr6g1853 1064 Gene3D - 177 336 IPR027417 -
Mtr6g1853 1064 Gene3D - 6 176 IPR035897 -
Mtr6g1853 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 152 IPR035897 -
Mtr6g1853 1064 CDD AAA 213 324 - -
Mtr6g1853 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 666 IPR044974 GO:0006952
Mtr6g1853 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 659 1007 IPR044974 GO:0006952
Mtr6g1853 1064 Pfam TIR domain 9 177 IPR000157 GO:0007165
Mtr6g1853 1064 SUPERFAMILY L domain-like 499 890 - -
Mtr6g1853 1064 SMART till_3 6 149 IPR000157 GO:0007165
Mtr6g1853 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
Mtr6g1853 1064 Gene3D Ribonuclease Inhibitor 526 738 IPR032675 -
Mtr6g1853 1064 Gene3D Ribonuclease Inhibitor 739 911 IPR032675 -
Mtr6g1853 1064 SMART AAA_5 207 346 IPR003593 -
Mtr6g1853 1064 Pfam NB-ARC domain 192 426 IPR002182 GO:0043531
Mtr6g1853 1064 ProSiteProfiles TIR domain profile. 5 175 IPR000157 GO:0007165
Mtr6g1853 1064 Gene3D - 343 427 IPR042197 -
Mtr6g1853 1064 PRINTS Disease resistance protein signature 210 225 - -
Mtr6g1853 1064 PRINTS Disease resistance protein signature 285 299 - -
Mtr6g1853 1064 PRINTS Disease resistance protein signature 378 392 - -
Mtr6g1853 1064 PRINTS Disease resistance protein signature 644 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1853 Mtr-Chr6 33663550 33667809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1853 9 769 WRKY Transcription Factor Family AT4G12020 27.784 9.29e-70 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1853 - - mtr:MTR_6g472300 1621.29