Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1850 ATGGCTATGCAATCACCTTCCAGAGTGTTCCTCAATTTCAGGGGCAGTGACACTCGCAACAATTTTACCGGTAATCTCTATAAGGCTCTTGTTGACAAGGGAATTAATACTTTCATTGATGAAAATGATCTTCAAAGAGGAGATGAAATCACATCATCACTTGTCAAGGCCATCGAAGAATCTGGGATTTTTATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAACACAAAGAGTTGCTTAGTATTGCCCGTTTTCTATGATGTGGAACCTACTCACATACGACATCAGAGTGGGAGTTATGGTGAGCATCTTACTAAGCATAAAGAGGGGTTCCAAAATAACGAGAAAAACATGGAGCGATTGCGTCAATGGAAGATGGCTCTTACTCAAGCTGCTAACTTGTCCGGCTATCATTATAGTCCTCATGAATCTGAATGCAAGTTTATTGAGAAGATAGTCGAAGGCATCTCCAACAAGATCAATCATGTTTTTTTAAACGTAGCCAAATACCCTGTTGGATTGCAGTCCCGAATAGAACAAGTGAAATTGCTTCTTGACATGGGCTCTGAGAATGAGGTCCGCATGGTAGGAATTTTTGGTACCGGAGGCATGGGTAAATCAACACTTGCAAAAGCAGTTTTTAATTCTATTGCTGATCAATTTGAAGGTGTATGTTTTCTTCATAATGTCAGAGAGAATTCAACTCTTAAGAACTTGAAACATCTCCAGAAGAAGCTCCTTTCAAAAATAGTTAAATTTGACGGTCAGATAGAAGATGTTAGTGAGGGAATACCAATTATAAAGGAAAGACTATCTAGAAAGAAGATTCTTTTGATTCTTGACGATGTTGACAAACTGGAGCAGCTAGACGCTTTGGCTGGAGGACTTGATTGGTTCGGTCTTGGAAGCAGAGTCATCATTACCACTCGTGATAAACGCTTACTAGCCTATCATGTGAATACAAGTACACATGCAGTAGAAGGGTTGAATGAGACAGAAGCTCTTGAATTATTGAGCCGAAATGCTTTTAAAAATGACAAAGTTCCTTCAAGTTATGAAGATATTTTAAACCGTGTAGTTACTTATGCATCTGGCCTTCCGTTAGCTATAGTAACAATAGGGGCCAATTTGATTGGAAGGAAGGTAGAAGATTGGGAGCGTATATTAGACGAGTATGAAAATATTCCCGATAAAGATATCCAAAGGATACTTCAAGTAAGCTATGATGCTTTGAAGGAAAAGGATCAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGGTGTAAATGGACAAAGGTTAAAAAAATACTTCATGCTCATTATGGCCATCCCATAGAACATCATGTTGGAGTGTTGGCTGAAAAATCTCTCATAGGCCATTGGGAATATGACACTCATGTGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCTCCCAAGAAGCCTGGAGAACGCAGTAGGTTGTGGTTTCGCGATGATATAGTTAACGTTTTAAGAGATAATACGGGAACTGGGAATATTGAAATGATATATCTCAAATATGCCTTCACGGCAAGAGAAACAGAGTGGGATGGAATGGCTTGCGAGAAGATGACAAATCTCAAAACACTTATCATTAAAGATGGTAACTTTTCAAGGGGTCCTGGGTATCTTCCAAGTAGTTTGAGATATTGGAAATGGATAAGTAGTCCTTTGAAGTCTCTATCTTGTATTTCGAGCAAGGAGTTCAACTATATGAAAGTTATGACATTGGACGGTTCTCAATATTTAACCCATATACCCGATGTCTCAGGTCTTCCAAATCTAGAAAAGTGCTCCTTTCGAGGATGTGATAGTTTAATTAAAATTCACAGTTCGATTGGACATCTAAATAAACTTGAAATCTTAGATACATTTGGTTGCAGCGAACTTGAGCATTTCCCACCCTTACAGCTGCCCTCTCTTAAGAAATTTGAAATCACTGATTGTGTGAGTCTCAAGAATTTTCCAGAATTATTATGTGAGATGACAAATATAAAAGATATTGAGATATATGATACTTCCATAGAAGAATTGCCATATTCATTTCAAAATTTCAGTAAACTTCAACGGTTAACAATATCTGGAGGCAACCTACAGGGAAAGCTCAGGTTCCCAAAATATAATGATAAAATGAATTCAATAGTGATTTCAAATGTGGAACATCTTAACCTCGCAGGCAACAGCCTCTCAGATGAATGTCTCCCAATACTTCTCAAGTGGTTTGTTAATGTGACATTTCTAGATTTATCCTGTAACTACAATTTCACAATTCTTCCCGAGTGCCTTGGTGAATGTCACCGTCTTAAGCATCTTAATTTGAAGTTTTGCAAGGCTCTTGTGGAAATTAGAGGGATTCCACCAAATCTTGAAATGCTTTTTGCAGTCATGTGTTATTCATTGAGTTCCTCAAGTATAAGAATGTTAATGAGTCAGAAACTACATGAGTCTGGATGCACCCATATTCTATTCCCAAACACAACGGATAGGATTCCTGATTGGTTTGAGCACCAAAGCAGGGGAGACACAATTTCTTTCTGGTTTGATAAAGAACTCCCTTCTATTAGCTTTACTTTTATTCTTATTAGTCAGGGGGACTACATGTTACCAATAGTCAAATTCTTTGTGAATGGCTATGAAAAAGAGATAAGTTGCGACGAATTGACTAGGGAATTCGGTGAGCTAGTGGATGATGACACTGTGTTGGAGAACCATACAACTTTGTTGCATATAAAATTGGAACAAGATAATGAACTCGGTGAAAGACTTTTGAAAAATGAATGGATCCATGTGGAGTTTAAGTTACAGGATTATTATTGGCACGCTGAGAGAAGATTATTCAGAAATACGCAAATGGGAATCCACGTGTGGAAGGAGAAAAGCAACATGGAGGGGGGTGTGAGATTCATTGATCCTTCATTATCACAATTTATGCAAAGATTGGTGGAAGTGGGAGTTTCAGAGAAAGGGGAGGAGGAGGAGGGTTTTAGTGACACGGAGGAGGATGTAATATTGAAGAATCCTAATAATAGAAAGACTTGGGGTACATTCCTTAGTCTAGGTGCATCAAAAAGCAACACGGATGGGGATGAGATTGAAATATTAAGCAGTGCACAAGATGAAAGAAAGATGTGGGGTACATTCCTCGGTTTAGGTCCATCATAA 3252 0.3847 MAMQSPSRVFLNFRGSDTRNNFTGNLYKALVDKGINTFIDENDLQRGDEITSSLVKAIEESGIFIPIFSANYASSSFCLDELVHIIHCYNTKSCLVLPVFYDVEPTHIRHQSGSYGEHLTKHKEGFQNNEKNMERLRQWKMALTQAANLSGYHYSPHESECKFIEKIVEGISNKINHVFLNVAKYPVGLQSRIEQVKLLLDMGSENEVRMVGIFGTGGMGKSTLAKAVFNSIADQFEGVCFLHNVRENSTLKNLKHLQKKLLSKIVKFDGQIEDVSEGIPIIKERLSRKKILLILDDVDKLEQLDALAGGLDWFGLGSRVIITTRDKRLLAYHVNTSTHAVEGLNETEALELLSRNAFKNDKVPSSYEDILNRVVTYASGLPLAIVTIGANLIGRKVEDWERILDEYENIPDKDIQRILQVSYDALKEKDQSVFLDIACCFKGCKWTKVKKILHAHYGHPIEHHVGVLAEKSLIGHWEYDTHVTLHDLIEDMGKEVVRQESPKKPGERSRLWFRDDIVNVLRDNTGTGNIEMIYLKYAFTARETEWDGMACEKMTNLKTLIIKDGNFSRGPGYLPSSLRYWKWISSPLKSLSCISSKEFNYMKVMTLDGSQYLTHIPDVSGLPNLEKCSFRGCDSLIKIHSSIGHLNKLEILDTFGCSELEHFPPLQLPSLKKFEITDCVSLKNFPELLCEMTNIKDIEIYDTSIEELPYSFQNFSKLQRLTISGGNLQGKLRFPKYNDKMNSIVISNVEHLNLAGNSLSDECLPILLKWFVNVTFLDLSCNYNFTILPECLGECHRLKHLNLKFCKALVEIRGIPPNLEMLFAVMCYSLSSSSIRMLMSQKLHESGCTHILFPNTTDRIPDWFEHQSRGDTISFWFDKELPSISFTFILISQGDYMLPIVKFFVNGYEKEISCDELTREFGELVDDDTVLENHTTLLHIKLEQDNELGERLLKNEWIHVEFKLQDYYWHAERRLFRNTQMGIHVWKEKSNMEGGVRFIDPSLSQFMQRLVEVGVSEKGEEEEGFSDTEEDVILKNPNNRKTWGTFLSLGASKSNTDGDEIEILSSAQDERKMWGTFLGLGPS* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1850 1083 Pfam TIR domain 9 178 IPR000157 GO:0007165
Mtr6g1850 1083 Gene3D - 177 341 IPR027417 -
Mtr6g1850 1083 PRINTS Disease resistance protein signature 210 225 - -
Mtr6g1850 1083 PRINTS Disease resistance protein signature 285 299 - -
Mtr6g1850 1083 PRINTS Disease resistance protein signature 378 392 - -
Mtr6g1850 1083 PRINTS Disease resistance protein signature 644 660 - -
Mtr6g1850 1083 PANTHER ARCHAEAL ATPASE 17 965 - -
Mtr6g1850 1083 ProSiteProfiles TIR domain profile. 5 175 IPR000157 GO:0007165
Mtr6g1850 1083 Gene3D Ribonuclease Inhibitor 510 884 IPR032675 -
Mtr6g1850 1083 Gene3D - 343 427 IPR042197 -
Mtr6g1850 1083 Pfam NB-ARC domain 191 426 IPR002182 GO:0043531
Mtr6g1850 1083 SMART till_3 6 149 IPR000157 GO:0007165
Mtr6g1850 1083 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 965 IPR044974 GO:0006952
Mtr6g1850 1083 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 152 IPR035897 -
Mtr6g1850 1083 SUPERFAMILY L domain-like 501 851 - -
Mtr6g1850 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 437 IPR027417 -
Mtr6g1850 1083 Gene3D - 6 176 IPR035897 -
Mtr6g1850 1083 SMART AAA_5 207 344 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1850 Mtr-Chr6 33595426 33599678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1850 9 780 WRKY Transcription Factor Family AT4G12020 28.468 3.39e-72 261