Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1848 ATGGAAGTTGTTGATGGGAATGGAGAACATTCTATTGATGGGAATGAAGAGCAAGCTATCAAGGAGATTGATGACAATGATTCATGTACCGTTGATTTAGAGGCTAACGGTGGTCAAGAGCCTAACATTGGAATGAAATTTGATTCACAAGAAAATGCTTATTCGTTCTACACTCATTATGCTAAGTCAGTTGGGTTTGGGATATCAATTAAAAATAGCTGTCGTTCAAAGATTTCTAGAGAGTTTATTGATGTAAGTTATGCTTGCACGAGATACGGCAAGAAGCGAGAATCTAGTTCACAAAATCCACGTCCTTGTTTGAAGGTGGGATGTGAGGCTAGTTTATGTGTTAAAAGAATTTGTGATGGAAAATGGATTGTTCATAGCTTCATTAAAGACCACAATCACAAACTTTTTCCAGCATATGCACATTATTTTCCTTGCCATAGAGGAATCAATAAAGCTCAAAAGCATTCTATTGAAACTTTGCACCATGTTGGAGTGAGAACAAGCAAATTTTTTGCCACAATGGCCAAAGAATATGGAGGATATGAAAACATTGGTTGCTTGGAGAAAGATGTAAGAAACCATTTAGATAAAGGTCGGCGTTTGGCTTTAGAATCTGGAGATGCAAATGCAATGTTGGATTGTTTTATGCTCATGCAAGAAGAAAGTCCAGGATTCTTTTATGCAATTGATATGGATGATGAGGGTCGCATGAAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGAAGACTATCAAGAGTTTGGAGATGTGATTTCATTTGATACTACATATATCACAAATAAGTACAAAATGCCATTTGCTCCTTTTATTGGTGTAAACAATCACTTTCAATCAAGGTTACTTGGCTGTGCATTACTCTCAGATGAGACTAAGAACACTTTCATATGGTTGATGAAAATATGGCTTAGAGCAATGGGTGGAAAACCTCCAAATGCAATCATAACTGATCAAGATAGAGCAATGAAATAG 999 0.3644 MEVVDGNGEHSIDGNEEQAIKEIDDNDSCTVDLEANGGQEPNIGMKFDSQENAYSFYTHYAKSVGFGISIKNSCRSKISREFIDVSYACTRYGKKRESSSQNPRPCLKVGCEASLCVKRICDGKWIVHSFIKDHNHKLFPAYAHYFPCHRGINKAQKHSIETLHHVGVRTSKFFATMAKEYGGYENIGCLEKDVRNHLDKGRRLALESGDANAMLDCFMLMQEESPGFFYAIDMDDEGRMKNVFWVDAKGREDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLSDETKNTFIWLMKIWLRAMGGKPPNAIITDQDRAMK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1848 332 Pfam MULE transposase domain 260 332 IPR018289 -
Mtr6g1848 332 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 17 332 - -
Mtr6g1848 332 Pfam FAR1 DNA-binding domain 55 140 IPR004330 -
Mtr6g1848 332 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 332 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1848 Mtr-Chr6 33549867 33550865 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g1848 FAR1 5.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1848 - - dzi:111309578 432.565