Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1844 ATGGCTATGCAATCACCTTCCCGAGTGTTCCTCAGTTTCAGAGGCAGTGACACTCGCAACACTTTTACCGGTAATCTCTATAAGGCTCTTGTTGACAAGGGAATTCGTACCTTCTTTGATGATAATGATCTTCAAAGAGGAGATGAAATCACACCATCACTTGTCAAGGCCATTGAAGAATCTAGGATTTTTATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGAGTTGCTTAGTATTGCCCGTTTTCTATGATGTGGAACCTACTCACATACGACATCAGAGTGGGAGTTATGGTGAGTATCTTACTAAGCATGAAGAGAGGTTTCAAAATAACGAGAAAAACATGGAGCGATTGCGTCAATGGAAGATAGCTCTTACCCAAGCTGCTAACTTGTCCGGCTATCATTATAGTCCTCATGGATATGAATACAAGTTTATTGAGAAGATAGTCGAAGACATCTCCAACAATATCAATCATGTTTTTTTAAACGTAGCCAAATACCCTGTTGGATTACAGTCCCGAATAGAACAAGTGAAATTGCTTCTTGACATGGGCTCTGAGGATGTGGTCCACATGGTAGGACTTTATGGTACTGGAGGCATGGGTAAATCAACACTTGCAAAAGCAGTTTATAATTTTGTTGCTGATCAATTTGAAGGTGTATGTTTTCTTCATAATGTCAGAGAGAGTTCAACTCTTAAGAACTTGAAACATCTCCAAAAGAAGCTCCTTTCAAAAATAGTTAAATTTGACGGTAAGTTAGAAGATGTTAGTGAGGGAATACCAATCATAAAGGAAAGACTATCTAGAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAACTGGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTCATGGAAGCAGGGTCATCATTACCACTCGTGATAAACACTTACTAGCCTGTCATGGGATTACAAGTACACATGCAGTAGAAGAATTGAATGAGACAGAAGCTCTTGAATTGTTGAGGCGAATGGCTTTTAAAAATGACAAAGTTCCTTCAACTTATGAAGAGATTTTAAACCGTGTAGTTACTTATGCATCTGGGCTGCCCTTAGCAATAGTAACAATAGGGGATAATTTGTTTGGAAGGAAGGTAGAAGATTGGAAGCGTATATTAGATGAGTATGAAAATATTCCCAATAAAGATATCCAAAGGATACTTCAAGTTAGCTATGATGCTTTGGAACCAAAGGAGAAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGGTGTAAATGGACAAAGGTTAAAAAAATACTTCATGCTCATTATGGCCATTGCATAGAACATCATGTTGGAGTGTTGGCTGAAAAATCTCTCATAGGCCATTGGGAATATGACACTCAGATGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAATCGTCCGACAAGAATCTCCCAAGAACCCTGGAGAACGCAGTAGGTTGTGGTTTCACGATGATATATTTGACGTTTTAAGAGATAATACAGGAACTGAGAATATTGAAATGATATATCTCAAATATGGCTTAACGGCAAGAGAAACAGAGTGGGATGGAATGGCTTTCAATAAGATGACAAATCTCAAAACACTTATCATTGATGATTATAAGTTTTCTGGGGGTCCTGGGTATCTTCCAAGTAGTTTGAGATATTTGGAATGGATAGATTATGATTTCAAGTCTCTGTCTTGTATTTTGAGCAAGGAGTTCAACTATATGAAAGTCTTGAAATTGGATTATAGTTCAGATTTAACCCATATACCCGATGTCTCGGGTCTTCCAAATCTAGAAAAGTGCTCATTTCAATTTTGTTTTAGTTTAATTACAATTCACAGTTCGATTGGACACCTAAATAAACTTGAAATCTTAAATGCATATGGTTGCAGCAAACTTGAGCATTTCCCACCCTTACAGCTGCCCTCTCTTAAGAAATTTGAAATCTCTAAGTGTGAGAGTCTCAAGAATTTTCCAGAATTATTATGCAAGATGAGAAATATAAAAGATATCAAGATATATGCCATTTCCATAGAAGAATTGCCATATTCATTTCAAAATTTCAGTGAACTTCAACGGTTAAAAATATCTAGATGCTACCTACGGTTCCGAAAATATTATGATACAATGAATTCAATAGTGTTTTCAAATGTGGAACATGTTGACCTCGCAGGCAACCTCCTCTCAGATGAATGTCTCCCAATACTTCTCAAGTGGTTTGTTAATGTGACATTTCTAGATTTATCCTGTAACTACAATTTCACAATTCTTCCCGAGTGCCTTGGTGAATGTCACTGTCTTAGGCATCTTAATTTGAGGTTTTGCGGGGCTCTTGAGGAAATTAGAGGGATTCCACCAAATCTTGAAAGCCTTTTTGCAGACAACTGTGATTCATTGAGTTCCTCAAGTAGAAGAATGTTAATGAGTCAGAAACTACATGAATCTGGATGCACCCATTTTCACTTCCCAAACACAACGGGAAGGATTCCTGATTGGTTTGAGCACCAAAGCAGGGGAGAGACAATTTCTTTCTGGTTTGATAAAGAACTCCCTTCTATTAGTTTTACTTTTATTATTATTCGTCCCCAGGACGAGTACCGGTACCCAACAGTCAAATTATTTGTGAATGGATATGAAAAAGAGATAAGTTGCGACGTATTCACTGGGAAATTCGGTGAGCTAGTGGATAATAAAACTGTGTTGGATAACCATACAACTTTGTTGCATATAAAATTGGAAGAAGATAATGAACCTGGTGAAAGACTTTTGAAAAATGAATGGATCCATGTGGAGTTTATGTTTGAGAGTTATTTTTGGTTCGATGTCAGAAATACGCAAATGGGAATCCACGTGTGGAAGGAGAAAAGCAACACGGAGGGGGGTGTGAGATTCATTGATCCTTCAGAGAAAGGGGAGGAGGAGGGTTTTAGTGACACGGAGGGAGGAGGATGGAATATTAAGCAGTGCACAAGATGA 3057 0.3808 MAMQSPSRVFLSFRGSDTRNTFTGNLYKALVDKGIRTFFDDNDLQRGDEITPSLVKAIEESRIFIPIFSANYASSSFCLDELVHIIHCYKTKSCLVLPVFYDVEPTHIRHQSGSYGEYLTKHEERFQNNEKNMERLRQWKIALTQAANLSGYHYSPHGYEYKFIEKIVEDISNNINHVFLNVAKYPVGLQSRIEQVKLLLDMGSEDVVHMVGLYGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVRESSTLKNLKHLQKKLLSKIVKFDGKLEDVSEGIPIIKERLSRKKILLILDDVDKLEQLEALAGGLDWFGHGSRVIITTRDKHLLACHGITSTHAVEELNETEALELLRRMAFKNDKVPSTYEEILNRVVTYASGLPLAIVTIGDNLFGRKVEDWKRILDEYENIPNKDIQRILQVSYDALEPKEKSVFLDIACCFKGCKWTKVKKILHAHYGHCIEHHVGVLAEKSLIGHWEYDTQMTLHDLIEDMGKEIVRQESPKNPGERSRLWFHDDIFDVLRDNTGTENIEMIYLKYGLTARETEWDGMAFNKMTNLKTLIIDDYKFSGGPGYLPSSLRYLEWIDYDFKSLSCILSKEFNYMKVLKLDYSSDLTHIPDVSGLPNLEKCSFQFCFSLITIHSSIGHLNKLEILNAYGCSKLEHFPPLQLPSLKKFEISKCESLKNFPELLCKMRNIKDIKIYAISIEELPYSFQNFSELQRLKISRCYLRFRKYYDTMNSIVFSNVEHVDLAGNLLSDECLPILLKWFVNVTFLDLSCNYNFTILPECLGECHCLRHLNLRFCGALEEIRGIPPNLESLFADNCDSLSSSSRRMLMSQKLHESGCTHFHFPNTTGRIPDWFEHQSRGETISFWFDKELPSISFTFIIIRPQDEYRYPTVKLFVNGYEKEISCDVFTGKFGELVDNKTVLDNHTTLLHIKLEEDNEPGERLLKNEWIHVEFMFESYFWFDVRNTQMGIHVWKEKSNTEGGVRFIDPSEKGEEEGFSDTEGGGWNIKQCTR* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1844 1018 CDD AAA 187 324 - -
Mtr6g1844 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 961 IPR044974 GO:0006952
Mtr6g1844 1018 Gene3D Ribonuclease Inhibitor 731 871 IPR032675 -
Mtr6g1844 1018 ProSiteProfiles TIR domain profile. 5 175 IPR000157 GO:0007165
Mtr6g1844 1018 Pfam NB-ARC domain 192 425 IPR002182 GO:0043531
Mtr6g1844 1018 SUPERFAMILY L domain-like 497 851 - -
Mtr6g1844 1018 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 152 IPR035897 -
Mtr6g1844 1018 PRINTS Disease resistance protein signature 210 225 - -
Mtr6g1844 1018 PRINTS Disease resistance protein signature 285 299 - -
Mtr6g1844 1018 PRINTS Disease resistance protein signature 378 392 - -
Mtr6g1844 1018 PRINTS Disease resistance protein signature 666 682 - -
Mtr6g1844 1018 PANTHER ARCHAEAL ATPASE 17 961 - -
Mtr6g1844 1018 Gene3D - 343 427 IPR042197 -
Mtr6g1844 1018 SMART till_3 6 149 IPR000157 GO:0007165
Mtr6g1844 1018 Gene3D - 177 336 IPR027417 -
Mtr6g1844 1018 Gene3D Ribonuclease Inhibitor 521 730 IPR032675 -
Mtr6g1844 1018 Pfam TIR domain 9 177 IPR000157 GO:0007165
Mtr6g1844 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
Mtr6g1844 1018 Gene3D - 6 176 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1844 Mtr-Chr6 33488594 33601294 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1844 9 776 WRKY Transcription Factor Family AT4G12020 27.709 8.53e-70 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1844 - - mtr:MTR_6g472300 1684.85