Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1840 ATGGCTATGCAATCACCTTCCCGAGTGTTCCTCAGTTTCAGGGGCAGTGACACTCGCAACAATTTTACCGGTAATCTCTATAAGGCTCTTGTTGACAAGGGAATTTGTACTTTCATGGATGATAATGATCTTGAAAGAGGAGATGAAATCACACCATCACTTGTCAAGGCCATCGAAGAATCTAGAATTTTTATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTCCAGATCATTCACTGCTACAAGACAAAGAGTTGCTTAGTATTGCCCGTTTTCTATGATGTGGAACCTACTCAGTTACGACATCAGAGTGGGAGTTATGGTGAGCATTTTACTAAGCATGAAGAGAGGTTTCAAAATAATGAGAAAAACATGGAGCGATTGCGTCAATGGAAGATAGCTCTTATCCAAGCTGCTAACTTGTCCGGCTATCATTATAGTCCTCATGGATATGAATACAAGTTTATTGAGAAGATAGTCGAAGACATCTCCAACAATATCAATCATGTTTTTTTATATGTGGCCAAATACCCTGTTGGATTACAGTCCCCAATAGAACAAGTGAAATTGCTTCTTGACTTGGGCTCTGAGGATGAGGTCCGCATGGTAGGACTTTATGGTACTGGAGGCATGGGTAAATCAACACTTGCAAAAGCAGTTTTTAATTTTGTTGCTGATCAATTTGAAGTTGTATGTTTTCTTCATAATGTCAGAGAGAATTCAAGTCATAATAACTTGAAACATCTCCAAAAGAAGCTCCTTTCAAAAATAGTTAAATTTGACGGTAAGTTAGAAGATGTTAGTGAGGGAATATCAATCATAAAGGAAAGACTATCTAAAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAACTAGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTCCTGGAAGCAGAGTCATCATTACCACTCGTGATACACATTTATTAGCCTGTCATGGGATTACAAGTACACATGTAGTAAAAGGGTTGAATGAGACAGAAGCTCTTGAATTGTTGAGGCGAATGGCGTTTAAAAATGACAAAGTTCCTTCGAGTTATGAAGAGATTTTAAACCGTGTAGTTACTTATGCATCTGGCCTTCCCTTAGCAATAGTAACAATAGGGGGCAATTTGTTTGGAAGGAAGGTAGAAGATTGGAAGCGTACATTAGATGAGTATGAAAATATTCCCGATAAAGATATCCAAAGGATACTTCAAGTAAGCTATGATGCTTTGAAGGAAAAGGATCAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGGTGTAAATGGACAAAGGTTAAAAAAATACTTCATGCTCATTATGGCCATTGCATAGAACATCATGTTGGAGTGTTGGCTGAAAAATGTCTCATAGGTCATTGGGAATATGACACTTATGTGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCTCCCAACAAGCCTGGAGAACGCAGTAGGTTGTGGTTTCGCGATGATATAGTTAACGTTTTAAGAGATAATACGGGAACTGGGAATATTGAAATGATATATTTAAAATATGACTCAACGGCAAGAGAAACAGAGTGGGATAGAATGGCTTGCAAGAAGATGACAAATCTCAAAACACTTATCATTGATGATTATAAGTTTTCTGGGGGTCCTGGGTATCTTCCAAGTAGTTTGAGATATTGGAAATGGAGATTTTGTCCTTTGAAGTCTCCATCTTGTATTTCGAGCAAGGAGTTCAACTATATGAAAGTCTTGATATTGGATCTTTGTGAATATTTAACCCATATACCTGATGTCTCGGGTCTTCGAAATCTAGAAAAGTGCTCCTTTCGAGAATGTCATAGTTTAATTACAATTCACAGTTCGATTGGACACCTAAATAAACTTGAAATCTTAAATGCATATGGTTGCTTAGAGCTTGAGCATTTCCCACCCTTACAGCTGCCCTCTCTTAAGAAATTTGAAATCTCTTATTGTGAGAGTCTCAAGAATTTTCCAGAATTATTATGCAAGATGACAAATATAAAAGATATCAAGATATATGATACTTCTATAGAAGAATTGCCGTATTCATTTCAAAATTTCAGTGAACTTCAACGGTTAACAATATCTGGATACGACCTAGGGGGAAAGCTCAGGTTCCCAAAATATAATGATAAAATGAATTCAATAGTGTTTTCAAATGTGGAACATGTTGACCTCAGAAACAACAACCTCTCAGATGAATGTCTCCCAATACTTCTCAAGTGGTTTGTTAATGTGACATTTCTAGACTTATCGGAGAACGATAATTTCACAATTCTTCCTGAGTGCCTTAGCGAATGTCACCATCTTAAACAACTTTATTTGAAGAACTGCAATTTTCTTGAGGAAATTAGAGGGATTCCACCAAATCTTGAAAGGCTTTTTGCAGACGAGTGTTATTCATTGAGTTCCTCAAGTATAAGAATGTTAATGAGTCAGAAACTACATGAGTCTGGATGCACCCATTTTCGATTCCCAAACACAACCGAAAGGATTCCTGATTGGTTTGAGCACCAAAGCAGGGGAGAGACAATTTCTTTCTGGTTTGATAAAGAACTCCCTTCTATTAGTTTTACTTTTATTATTATTCGTCAGCACTGCATGAACCCAACAGTCAAATTATTTGTGGATGGCTATGAAAAAGAGATAGGTTGTGACGAATTCACCGGAGAATTCGGTGAGCTAGTGGGTGATGAAACTTTGTTGGATAACCACACAACTTTTTTGCATATAAAATTGGAAGATTATTCAGTCAAATTTTTTAAACGATGGATCCATGTGGAGTTTAAGTTGTGGGGTTATTTGTGGCTCGGGGAGGTTACAAGATTATTCAGAAATACGCAAATGGGAATCCATGTGTGGAAGGAGAAAAGCAACATGGAGGGGAGTGTGAGATTCATTGATCCTTCATTATTACAATTTATGCCTCCTCAAAAAAAGCAAAGATTGGTGGAAGTGGGAGTTTCAGAGAAAGGGGAGGAGGGTTTTAGGAGGATGTAA 3084 0.3765 MAMQSPSRVFLSFRGSDTRNNFTGNLYKALVDKGICTFMDDNDLERGDEITPSLVKAIEESRIFIPIFSANYASSSFCLDELVQIIHCYKTKSCLVLPVFYDVEPTQLRHQSGSYGEHFTKHEERFQNNEKNMERLRQWKIALIQAANLSGYHYSPHGYEYKFIEKIVEDISNNINHVFLYVAKYPVGLQSPIEQVKLLLDLGSEDEVRMVGLYGTGGMGKSTLAKAVFNFVADQFEVVCFLHNVRENSSHNNLKHLQKKLLSKIVKFDGKLEDVSEGISIIKERLSKKKILLILDDVDKLEQLEALAGGLDWFGPGSRVIITTRDTHLLACHGITSTHVVKGLNETEALELLRRMAFKNDKVPSSYEEILNRVVTYASGLPLAIVTIGGNLFGRKVEDWKRTLDEYENIPDKDIQRILQVSYDALKEKDQSVFLDIACCFKGCKWTKVKKILHAHYGHCIEHHVGVLAEKCLIGHWEYDTYVTLHDLIEDMGKEVVRQESPNKPGERSRLWFRDDIVNVLRDNTGTGNIEMIYLKYDSTARETEWDRMACKKMTNLKTLIIDDYKFSGGPGYLPSSLRYWKWRFCPLKSPSCISSKEFNYMKVLILDLCEYLTHIPDVSGLRNLEKCSFRECHSLITIHSSIGHLNKLEILNAYGCLELEHFPPLQLPSLKKFEISYCESLKNFPELLCKMTNIKDIKIYDTSIEELPYSFQNFSELQRLTISGYDLGGKLRFPKYNDKMNSIVFSNVEHVDLRNNNLSDECLPILLKWFVNVTFLDLSENDNFTILPECLSECHHLKQLYLKNCNFLEEIRGIPPNLERLFADECYSLSSSSIRMLMSQKLHESGCTHFRFPNTTERIPDWFEHQSRGETISFWFDKELPSISFTFIIIRQHCMNPTVKLFVDGYEKEIGCDEFTGEFGELVGDETLLDNHTTFLHIKLEDYSVKFFKRWIHVEFKLWGYLWLGEVTRLFRNTQMGIHVWKEKSNMEGSVRFIDPSLLQFMPPQKKQRLVEVGVSEKGEEGFRRM* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1840 1027 SMART till_3 6 149 IPR000157 GO:0007165
Mtr6g1840 1027 PANTHER ARCHAEAL ATPASE 17 958 - -
Mtr6g1840 1027 Gene3D - 6 178 IPR035897 -
Mtr6g1840 1027 Pfam TIR domain 9 177 IPR000157 GO:0007165
Mtr6g1840 1027 PRINTS Disease resistance protein signature 210 225 - -
Mtr6g1840 1027 PRINTS Disease resistance protein signature 285 299 - -
Mtr6g1840 1027 PRINTS Disease resistance protein signature 378 392 - -
Mtr6g1840 1027 PRINTS Disease resistance protein signature 666 682 - -
Mtr6g1840 1027 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 958 IPR044974 GO:0006952
Mtr6g1840 1027 SUPERFAMILY "Winged helix" DNA-binding domain 414 521 IPR036390 -
Mtr6g1840 1027 Gene3D - 179 337 IPR027417 -
Mtr6g1840 1027 SMART AAA_5 207 346 IPR003593 -
Mtr6g1840 1027 Pfam NB-ARC domain 193 426 IPR002182 GO:0043531
Mtr6g1840 1027 ProSiteProfiles TIR domain profile. 5 175 IPR000157 GO:0007165
Mtr6g1840 1027 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 152 IPR035897 -
Mtr6g1840 1027 SUPERFAMILY L domain-like 551 850 - -
Mtr6g1840 1027 Gene3D - 343 427 IPR042197 -
Mtr6g1840 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 437 IPR027417 -
Mtr6g1840 1027 Gene3D Ribonuclease Inhibitor 667 734 IPR032675 -
Mtr6g1840 1027 Gene3D Ribonuclease Inhibitor 520 666 IPR032675 -
Mtr6g1840 1027 Gene3D Ribonuclease Inhibitor 735 869 IPR032675 -
Mtr6g1840 1027 CDD AAA 213 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1840 Mtr-Chr6 33399252 33427234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1840 9 755 WRKY Transcription Factor Family AT4G12020 26.642 7.02e-67 244