Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1838 ATGACGACTTCTGCCTGTGCTTTGATTGATGGCAACTTCTGCCAGGTTTCAAACCGGTGGGCTTTATCCCCAAGGAATGATTACTTGACCATCAATGGCCTGTTTATTAGGTCGTATCCCATCAAAGTCGAAGACATCTCGGATAGGATCAATCGTGTTTCATTACATGTTGCCAAATACCCTGTTGGATTACAATCCCGAGTACAACACGTGAAATTGCTTCTAGATGAGGTATCTGAGGATGAGTTCCACATGGTAGGACTTTATGGTACTGGAGGCTTAGGTAAATCAACACTTGCAAAATCAATCTATAACTTCATTGCTGATCAATTTGAAGGTTTATGTTTTCTAGGAGATGTGAGAGAGAATTCAACTCCAAGAAACTTGAAAGATCTCCAGGAAAAACTCCTTTCGAAAATGGTTAGATTAGACATTAAGTTAAGAAGTGTTAGTGAGGGAATTGCAATCATAAAACAAGGACTATGTAGAGAGAAGATTCTTTTGATTCTCGATGATGTTGACAGACTGGAGCAGCTAGAGGATTTGGCTGAAGGACTTGATTGGTTCGGTCGTGGAAGCGGAGTTATCATTACCACTCGAGACAAACACATACTAACCAGTCATGGGATAGAAAGTATGCATGCAGTAGAAGAGTTGCATGGGGAAGAAGCTCTTGAATTGCTTATGTGGATGGCTTTTAAAAATGACAGAGTTCCTTCAATTTATGAAGACATTTTAACACTTGCAATTACCTATGCTTCTGGCCTTCCATTAGCTTTAGTAATAATAGGGTCAAATTTGTTTGGAAATAGCATAGAAGAATGGAAGTGTACATTAGATGAGTATGAAAAGATTTTCAATAAAGAGATCCAAAAGATACTTAGAGTGAGCTATGATGCTTTGGAGGAAAAGGAGCAGAGTATCTTTCTAGACATGACTTGTTTCTTCAAAGGTTGGAAATGGGCGGATGTCAAAAATATACTTCATGATCATTATGGCCATTGCGTAAACTATCATCTTGGAAAGTTGGCTAAAAAATCTTTCATAAATATAACTACTATATACCCTTTGGGATATATTCATGATGAAACATTACATAACTTGATAGAGCACATGGGTAAAGAAGTCGTTCGACAAGAATCACGTAATGATCCTGGAGAACGTAGTAGGTTGTGGTGTCCCGATGATATGGTTCAAGTTTTAAGAGAAAACACGGGAACTAGTAAAATTGAAATGATATATATGAATTTCCCCTCCATGGAATTCGAAATAGACTGGAATGGAGAGGCCTTCAAGAAGACGACAAAACTCAAAACACTTCAATAA 1326 0.3793 MTTSACALIDGNFCQVSNRWALSPRNDYLTINGLFIRSYPIKVEDISDRINRVSLHVAKYPVGLQSRVQHVKLLLDEVSEDEFHMVGLYGTGGLGKSTLAKSIYNFIADQFEGLCFLGDVRENSTPRNLKDLQEKLLSKMVRLDIKLRSVSEGIAIIKQGLCREKILLILDDVDRLEQLEDLAEGLDWFGRGSGVIITTRDKHILTSHGIESMHAVEELHGEEALELLMWMAFKNDRVPSIYEDILTLAITYASGLPLALVIIGSNLFGNSIEEWKCTLDEYEKIFNKEIQKILRVSYDALEEKEQSIFLDMTCFFKGWKWADVKNILHDHYGHCVNYHLGKLAKKSFINITTIYPLGYIHDETLHNLIEHMGKEVVRQESRNDPGERSRLWCPDDMVQVLRENTGTSKIEMIYMNFPSMEFEIDWNGEAFKKTTKLKTLQ* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1838 441 SMART AAA_5 82 219 IPR003593 -
Mtr6g1838 441 Gene3D - 47 212 IPR027417 -
Mtr6g1838 441 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 440 IPR044974 GO:0006952
Mtr6g1838 441 Gene3D - 218 302 IPR042197 -
Mtr6g1838 441 Pfam NB-ARC domain 67 301 IPR002182 GO:0043531
Mtr6g1838 441 PRINTS Disease resistance protein signature 85 100 - -
Mtr6g1838 441 PRINTS Disease resistance protein signature 160 174 - -
Mtr6g1838 441 PRINTS Disease resistance protein signature 253 267 - -
Mtr6g1838 441 PRINTS Disease resistance protein signature 432 441 - -
Mtr6g1838 441 SUPERFAMILY "Winged helix" DNA-binding domain 288 401 IPR036390 -
Mtr6g1838 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 311 IPR027417 -
Mtr6g1838 441 PANTHER ARCHAEAL ATPASE 43 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1838 Mtr-Chr6 33376332 33385809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1838 62 441 WRKY Transcription Factor Family AT4G12020 28.866 1.83e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1838 - - mtr:MTR_6g471170 742.265