Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1837 ATGGCTATGCAATCACCTTCCAGAGTGTTCCTCAATTTCAGGGGCAGTGACACTCGCAACAATTTTACCGGTAATCTCTATAAGGCTCTTGTTGACAAGGGAATTCGTACTTTCATTGATGAAAATGATCTTCAAAGAGGAGATGAAATCACACCATCACTTGTCAAGGCCATTGAAGAATCTAGGATTTGTATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGAGTTGCTTAGTATTACCCGTTTTCTATGGTGTGGATCCTACTGATGTTCGACGTCATACATGTAGTTATGGTGAATATCTGACTAAGCATGAAGAGGGGTTCCAAAATAACGAGAAAAACATGGAGCGATTGCGTCAATGGAAGATGGCTCTTACTCAAGCTGCTAATTTGTCCGGCTATCATTATAGTCCTCATGAATATGAACACAAGTTTATTGAGAAGATAGTCCAATACATCTCCAACAATATCAATCATGATTTTTTAAACGTAGCCAAATACCCTGTTGGATTACAGTCCCGAATAGAACAAGTGAAATTGCTTCTTGACATGGGCTCTGAGGATGAGGTCCGCATGGTAGGACTTTTTGGTACTGGAGGCATGGGTAAATCAACACTTGCAAAAGCAGTTTTTAATTTTCTTGCTGATCAATTTGAAGGTGTATGTTTTCTTCATAATGTCAGAGAGAATTCAAGTCATAATAACCTGAAACATCTCCAAAAGATGCTCCTTTCAAAAATAGTTAAATTTGACGGTAAGTTAGAAGATGTTAGTGAGGGAATACCAATCATAAAGGAAAGACTATCTAGAAAGAAGATTCTTTTGATTGTTGATGATGTTGACAAACTGGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTCATGGAAGCAGAGTCATCATTACCACTCGTGATAAACACTTACTAGCCTGTCATGGGATTACAAGTACACATGCAGTAGAAGAATTGAATGAGACAGAAGCTCTTGAATTGTTGAGGCGAATGGCTTTTAAAAATGACAAAGTTCCTTCAAGTTATGAAGAGATTTTAAACCGTGTAGTTACTTATGCATCTGGCCTGCCCTTAGCAATAGTAACAATAGGGGGCAATTTGTTTGGAAGGAAGGTAGAAGATTGGAAGCGTACATTAGATGAGTATGAAAATATTCCCGATAAAGATATCCAAAGGATACTTCAAGTAAGCTATGATGCTTTGAAGGAAAAGGATCAGAGTGTCTTTCTAGACATTGCTTGTTGCTTCAAAGGGTGTAAATGGACAAAGGTTAAAAAAATACTTCATGCTCATTATGGCCATTGCATAGAACATCATGTTGGAGTGTTGGCTGAAAAATGTCTCATAGGTCATTGGGAATATGACACTTATGTGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTTCGACAAGAATCTCCCAAGAAGCCTGGAGAACGCAGTAGGTTGTGGTTTCACGATGATATACTTAACGTTTTAAGAGATAATATGGGAACTGAGAATATTGAAATGATATATTTAAAATTTGACCCAACGGCAAGAGAAACAGAGTGGGATGGAATGGCTTGCAAGAAGATGACAAATCTCAAAACACTTATCATTGAAGATGGTAATTACTTTTCTGGGGGTCCTGGGCATCTTCCAAGTAGTTTGAGATATTGGAAATGGATAAGTTGTCCTTTGAAGTCTCTTTCTTGTATTTCGAGCAAGGAGTTCAACTATATGAAAGTCTTGACATTGGATTTTTGTGAATATTTAACCCATATACCCGATGTCTCGGGTCTTCCAAATCTAGAAAAGTGCTCATTTCGATATTGTTTTAGTTTAATTACAATTCCCAGTTCGATTGGACACCTAAATAAACTTGAAATCTTAAATGCATATGGTTGCAGCAAACTTGAGCATTTTCCAGAATTATTATGTAAGATGTCAAATATAAAAGATATTAAGATATATGATACTTCCATAGAAGAATTGCCATATTCATTTCAAAATTTCAGTGAAATTCAACGGTTAACAATATATGGATACTACCTACCGGGAAAGCTCAGGTTCCAAAAATATAATGATAAAATGAATTCAATAGTGTTTTCAAATGTGGAACATGTTGAGCTCAGAAACAACAACCTCTCAGATGAATGTCTCCCAATACTTCTCAAGTGGTTTGTTAATGTGACATTTCTAGACTTATCGCAGAACAATTTCACAATTCTTCCCGAGTGCCTTGGTGAATGTCACCGTCTTAAGCATCTTTATTTGAAGAAGTGCAAGGCTCTTGAGGAAATTAGAGGGATTCCACCAAATCTTGAAAGGCTTTTTGCACGCGGGTGTTATTCATTGATTTCCTCAAGTATAAGAATGTTAATGAGTCAGCTTGACGGATTTCATTTCGTTCTATCCGTGCCTTCCGCTGGTCGAAACGACTATGAAGTGCTGAGTTTCTCAAACTAA 2535 0.3751 MAMQSPSRVFLNFRGSDTRNNFTGNLYKALVDKGIRTFIDENDLQRGDEITPSLVKAIEESRICIPIFSANYASSSFCLDELVHIIHCYKTKSCLVLPVFYGVDPTDVRRHTCSYGEYLTKHEEGFQNNEKNMERLRQWKMALTQAANLSGYHYSPHEYEHKFIEKIVQYISNNINHDFLNVAKYPVGLQSRIEQVKLLLDMGSEDEVRMVGLFGTGGMGKSTLAKAVFNFLADQFEGVCFLHNVRENSSHNNLKHLQKMLLSKIVKFDGKLEDVSEGIPIIKERLSRKKILLIVDDVDKLEQLEALAGGLDWFGHGSRVIITTRDKHLLACHGITSTHAVEELNETEALELLRRMAFKNDKVPSSYEEILNRVVTYASGLPLAIVTIGGNLFGRKVEDWKRTLDEYENIPDKDIQRILQVSYDALKEKDQSVFLDIACCFKGCKWTKVKKILHAHYGHCIEHHVGVLAEKCLIGHWEYDTYVTLHDLIEDMGKEVVRQESPKKPGERSRLWFHDDILNVLRDNMGTENIEMIYLKFDPTARETEWDGMACKKMTNLKTLIIEDGNYFSGGPGHLPSSLRYWKWISCPLKSLSCISSKEFNYMKVLTLDFCEYLTHIPDVSGLPNLEKCSFRYCFSLITIPSSIGHLNKLEILNAYGCSKLEHFPELLCKMSNIKDIKIYDTSIEELPYSFQNFSEIQRLTIYGYYLPGKLRFQKYNDKMNSIVFSNVEHVELRNNNLSDECLPILLKWFVNVTFLDLSQNNFTILPECLGECHRLKHLYLKKCKALEEIRGIPPNLERLFARGCYSLISSSIRMLMSQLDGFHFVLSVPSAGRNDYEVLSFSN* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1837 844 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 819 IPR044974 GO:0006952
Mtr6g1837 844 CDD AAA 213 324 - -
Mtr6g1837 844 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 437 IPR027417 -
Mtr6g1837 844 PRINTS Disease resistance protein signature 210 225 - -
Mtr6g1837 844 PRINTS Disease resistance protein signature 285 299 - -
Mtr6g1837 844 PRINTS Disease resistance protein signature 378 392 - -
Mtr6g1837 844 PRINTS Disease resistance protein signature 645 661 - -
Mtr6g1837 844 Gene3D - 343 427 IPR042197 -
Mtr6g1837 844 Gene3D - 6 175 IPR035897 -
Mtr6g1837 844 ProSiteProfiles TIR domain profile. 5 175 IPR000157 GO:0007165
Mtr6g1837 844 Pfam NB-ARC domain 192 426 IPR002182 GO:0043531
Mtr6g1837 844 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 152 IPR035897 -
Mtr6g1837 844 Gene3D - 176 336 IPR027417 -
Mtr6g1837 844 SUPERFAMILY L domain-like 497 810 - -
Mtr6g1837 844 SMART till_3 6 149 IPR000157 GO:0007165
Mtr6g1837 844 Pfam TIR domain 9 176 IPR000157 GO:0007165
Mtr6g1837 844 PANTHER ARCHAEAL ATPASE 17 819 - -
Mtr6g1837 844 Gene3D Ribonuclease Inhibitor 516 669 IPR032675 -
Mtr6g1837 844 Gene3D Ribonuclease Inhibitor 670 824 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1837 Mtr-Chr6 33366255 33399456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1837 9 770 WRKY Transcription Factor Family AT4G12020 25.833 1.12e-62 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1837 - - mtr:MTR_6g472300 1398.65