Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1833 ATGGGTTGTGATAATTGGGCCACACGCATTTGTTGCGGATTTTGTATGGCTGTAGTCCTCTTCGTAATTGGCATCATCGTCTTCTGGATAGTAATCTCCCCCTCAAGCGTGAAATTTCACGTAACTGATGCATCTCTCACCGAGTTCAACCTCACAAACAACAACTTATTTTACAATTTCAAAGTGAATATCACAGCAAGAAACCCCAACAACAACATCATAGTCTATTATCGAAGAATCACCGCGATTGCCTGGTACAAAGACAATGATTTCAGTCGTGCGAGTTTGTCTCCCTTTGATCAAGGACACAAGAATACCACTTTTCTTGGACCTGTAGAATTTAAAGGAAATGCTACCATCAAACTTGGACGTCAACAACTTAACGAGTATTCTGAAGAGACGCGTCTTGGGATTTATAACGATTTGGCTGTTGATTTTGATTTTCGAATTAGAGCTAAGTTTGGTAGCTTTTATAAAAGTGGTCGGTTTAAGCCACCGGTTGTTCAGTGTGGTCGTTTGAGTGTTCCTTTGGTTTCTTCTTCCAATGGTAACTCATCATCATCAACATTTTCTTTTAGTACCAGAAGATGTAGCGCTGATTCTTTCTTTTTAGACCGTGATATAAATAAATATTGA 636 0.3915 MGCDNWATRICCGFCMAVVLFVIGIIVFWIVISPSSVKFHVTDASLTEFNLTNNNLFYNFKVNITARNPNNNIIVYYRRITAIAWYKDNDFSRASLSPFDQGHKNTTFLGPVEFKGNATIKLGRQQLNEYSEETRLGIYNDLAVDFDFRIRAKFGSFYKSGRFKPPVVQCGRLSVPLVSSSNGNSSSSTFSFSTRRCSADSFFLDRDINKY* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1833 211 PANTHER HARPIN-INDUCED 1 16 202 - -
Mtr6g1833 211 Pfam Late embryogenesis abundant protein 63 162 IPR004864 -
Mtr6g1833 211 PANTHER OS05G0367900 PROTEIN 16 202 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1833 Mtr-Chr6 33319755 33320668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1833 31 182 SNARE and Associated Proteins AT1G32270 30.323 1.60e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1833 - - mtr:MTR_6g070890 275.018