Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1832 ATGGGTTGGGCCGCACGCATTTGTTGCACATTATGTTGTCTTATAGTCCTCTTCGTAATTACAATCATCGTCTTTTGGATAATAGTCTCCCCTTCAAGCGTGAAATTTCACGTAACCGATGCAACTCTCACCGAGTTCAATCTCACAAACAACAACTTATATTACAATTTCAAAGTGAATGTCACAGCAAGAAACCCCAACAACAACATCATAGTCTATTATCGAAGAATCAAGGCGATTGCTTGGTACAAAGACAATGATTTCAGTCATATAACTTTGACACCCTTTGATCAAGGACACAAGAATACCACTTTTCTTGGACCTATAGAATTTAAAGGAAATGCTTTCATCAAACTTGGACGTCAACAACTTAACGAGTATTCTGAAGAGACGCGTCTTAGGATTTATAAAGATTTGGCTGTTGATTTTGATATTCGAATTAGAGCTAAGTATGGAAGCTTCTATAAGAGTGGTCGGTTTAATCCACCGGTTCTGCAGTGTCGTCGTTTGAGAGTTCCTTTGGTTTCTTCTTTCAATAGTAACTCGTCATCATCACCATTTTTTTTTAGTACCAGAAGATGTAGCAGTGGTGATTTCTTTACAGACCGTGATATAAATAAAGCAGCAACAGTTTGA 636 0.3774 MGWAARICCTLCCLIVLFVITIIVFWIIVSPSSVKFHVTDATLTEFNLTNNNLYYNFKVNVTARNPNNNIIVYYRRIKAIAWYKDNDFSHITLTPFDQGHKNTTFLGPIEFKGNAFIKLGRQQLNEYSEETRLRIYKDLAVDFDIRIRAKYGSFYKSGRFNPPVLQCRRLRVPLVSSFNSNSSSSPFFFSTRRCSSGDFFTDRDINKAATV* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1832 211 PANTHER HARPIN-INDUCED 1 13 200 - -
Mtr6g1832 211 PANTHER OS05G0367900 PROTEIN 13 200 IPR044839 GO:0098542
Mtr6g1832 211 Pfam Late embryogenesis abundant protein 60 159 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1832 Mtr-Chr6 33311860 33313039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1832 28 189 SNARE and Associated Proteins AT1G32270 27.439 6.70e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1832 - - mtr:MTR_6g070890 291.197