Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1831 ATGTCTCAAATTCTATGTTCTATACTCCATATCCAAACCCCATTTTCAATGCCATTCATCACCCTCTCACCACCATCTTCTTCCCCTTTCACCATTGCCACCCCTTCAAACCTCACCTTCAAAACCACAACTCCTTTCCCTCTCTCCTCCACAAGAAACCGCTCCCGTTTCGCAACAGTGGTCAGAGCCAAAGGTGGAAAAGATCACTACTCTACTTTGAATGTCAGCAACAATGCTTCGTTGCAAGAAATTAAGAGTTCTTATAGGAAACTTGCTCTAAAGTACCATCCAGATATGAACAAAAATCCTGGAGCAGAAGAGAAGTTCAAGGAGATTAGTGCTGCATACGAGGTCCTATCAGATGATGAGAAAAGGTCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGGACCAACCAATGCCTCAGAGGTTGATCCTTCTGATTTATTCGATGCATTCTTTGGTCGTACGGATGGACTATTTAGTGATGAAGGGGGCTTCGGCTTCAATATGAGAAACAGTGGAAACCGTGGCAATGATATTCGGCATGACCTTCGTCTAAGCTTTGAAGAATCCGTTTTTGGAGTAAAGAGAGAGATTGAAATTTCCTGTTATGAGACATGTAATACTTGTGATGGTACAGGAGCTAAATCAAAGAATGGCATTAAAAAATGCACAAGTTGTGGTGGAAAAGGAGGAGAGAAGAAAACCCAGAGAACACCGTTTGGAATGATGTCTCAGGTTTCTACCTGCTCTAAGTGTGGTGGTCTTGGCATGATAATCACGGATAGATGTCGAAAGTGTGATGGCAGCGGTCTTGTGCAAGCTAAACGAAAAATGGATGTGGTCATCCCTCCTGGCGTCAGTGATGGAGACACAATGAAAATTCGAGGAGAAGGGAATTTTGATAAGAGGAGGCGTTATACTGGGGATCTTTTTGTTGTCCTCCATGTTGATAGAAAGCAAGGAATTTGGAGAGAGGGTCTCAATTTATACTCAAAGATTAACATTGACTTCACCGAGGCAATACTGGGGTCTGTTAAAAAGGTTGAAACTGTTGAAGGTTTTAAGGACCTCCAGATTCCTTCCGGGATTCAACATGGACATTCAGTGAAGTTATCACGTTTAGGAGTTCCAGACATGAACAGACCATCTATTCGCGGCGATCATTACTTCGTCGTAAATGTTCTTCTTCCTAATGATATCAGTGGCACGGAACGCTCACTTGTTGAACAGTTAGCTTCACTTCGAGCATCTAGACAAGGTCATTCATGGTCTTCTGATGACACTGGGCAGCGTAAAGGAAAATTCAATGATTCCATGTGGAGGGATAAAAGAAGTGATGCCTCAAGCGAGGAAACTGAAACTGCAAGTTCTCTATGGGGATCAATCAAGAATTTCTTAAGGAGAGGAAATTCTGACGAAAGGTTTGCATCAATTAGCCAAGATACATCAACACTGATGTGGAGATTTGGCCACCAAAACTATTCAGTCCCACATTCCATTTTTGTTGTTCTATTTATAACTTGGATTTTGAAATCTATAGCAAAGTCTATTCAGAAAAGAACCTAA 1587 0.4184 MSQILCSILHIQTPFSMPFITLSPPSSSPFTIATPSNLTFKTTTPFPLSSTRNRSRFATVVRAKGGKDHYSTLNVSNNASLQEIKSSYRKLALKYHPDMNKNPGAEEKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGPTNASEVDPSDLFDAFFGRTDGLFSDEGGFGFNMRNSGNRGNDIRHDLRLSFEESVFGVKREIEISCYETCNTCDGTGAKSKNGIKKCTSCGGKGGEKKTQRTPFGMMSQVSTCSKCGGLGMIITDRCRKCDGSGLVQAKRKMDVVIPPGVSDGDTMKIRGEGNFDKRRRYTGDLFVVLHVDRKQGIWREGLNLYSKINIDFTEAILGSVKKVETVEGFKDLQIPSGIQHGHSVKLSRLGVPDMNRPSIRGDHYFVVNVLLPNDISGTERSLVEQLASLRASRQGHSWSSDDTGQRKGKFNDSMWRDKRSDASSEETETASSLWGSIKNFLRRGNSDERFASISQDTSTLMWRFGHQNYSVPHSIFVVLFITWILKSIAKSIQKRT* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1831 528 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 414 IPR008971 GO:0006457|GO:0051082
Mtr6g1831 528 CDD DnaJ 68 121 IPR001623 -
Mtr6g1831 528 Gene3D - 183 319 - -
Mtr6g1831 528 MobiDBLite consensus disorder prediction 426 460 - -
Mtr6g1831 528 Pfam DnaJ domain 68 129 IPR001623 -
Mtr6g1831 528 Gene3D DnaJ domain 65 168 IPR036869 -
Mtr6g1831 528 Coils Coil 521 528 - -
Mtr6g1831 528 CDD DnaJ_C 184 404 - -
Mtr6g1831 528 PANTHER EXPRESSED PROTEIN 73 428 - -
Mtr6g1831 528 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 200 280 IPR036410 -
Mtr6g1831 528 Pfam DnaJ central domain 213 277 IPR001305 GO:0031072|GO:0051082
Mtr6g1831 528 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Mtr6g1831 528 Gene3D - 327 434 - -
Mtr6g1831 528 PRINTS DnaJ domain signature 70 88 IPR001623 -
Mtr6g1831 528 PRINTS DnaJ domain signature 88 103 IPR001623 -
Mtr6g1831 528 PRINTS DnaJ domain signature 104 124 IPR001623 -
Mtr6g1831 528 PRINTS DnaJ domain signature 124 143 IPR001623 -
Mtr6g1831 528 SMART dnaj_3 67 124 IPR001623 -
Mtr6g1831 528 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Mtr6g1831 528 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 323 IPR008971 GO:0006457|GO:0051082
Mtr6g1831 528 CDD DnaJ_zf 213 277 IPR001305 GO:0031072|GO:0051082
Mtr6g1831 528 Gene3D - 213 277 - -
Mtr6g1831 528 SUPERFAMILY Chaperone J-domain 65 174 IPR036869 -
Mtr6g1831 528 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 73 428 - -
Mtr6g1831 528 MobiDBLite consensus disorder prediction 432 457 - -
Mtr6g1831 528 Hamap Chaperone protein DnaJ [dnaJ]. 65 472 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mtr6g1831 528 Pfam DnaJ C terminal domain 186 404 IPR002939 -
Mtr6g1831 528 ProSiteProfiles Zinc finger CR-type profile. 200 282 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1831 Mtr-Chr6 33301180 33309098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1831 69 129 C2H2 Transcription Factor Family AT1G74250 47.761 2.53e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1831 K03686 - gmx:100782135 714.146