Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1828 ATGAAGTTTTATTTTTCTTTCTTTCTCTTTTTTCTGACACTTTTTCTTCCGTCGGTAAAACCCGACCTCACTTCAGAACGCGCCGCTTTATTAACCCTACGCGCTGCCGTAACTGGCCGAACCCTACTCTGGAACACTACTTCCGCCTCTCCTTGCAACTGGGCCGGCGTCCATTGTAACCAAAACCACACTCACGTTGTCGAGCTTCACCTCCCCGCCGTCGCACTTTCCGGTAACCTCCCCACCGGCGTTTTCTCCGAACTTCCTAACCTCCACACTCTCAGCCTCCGTTTCAACTCCCTCTCCGGTCCTCTCCCCTCCGACCTTGCTGCTTGCACCTCCCTCAAAAACCTCTACCTTCAACAGAATCTTCTCTCCGGTGAACTTCCGGCGACTTTTTTCAACCTCACCGGACTTGTTCGTCTAAATTTAGCTTCCAACAATTTCTCCGGTGAAATTCCGGTGGGGTTTGGTAACTTAACCCGGTTGAAAACATTGTATCTTCAAAACAACCGGTTCACCGGTTCGTTAAGCGAGTTTGAGTTAAACCCGGTTCAACTCGCTCAGTTCAATGTTTCAAACAACATGCTAAACGGTTCTGTTCCTGAAAAGTTGCAAACTTTTGGAAAAGATTCGTTTTTGGGTAATTTGTTATGTGGGAAACCACTTAACCCTTGTCCTAAGGAAGGAGGTACAAATAGTGGAAATGGGGGTGCAAATAGTGGTAATGGGGGTAGAAATTCAAGTGTAGTTGATGAAAATAATGGGTTTGTAAGGAACAAGAAGAAAGGGAAATTATCTGGTGGTGCTATAGCTGGAATTGTTATTGGGTCAGTTGTGATTCTTTTGATTGTGGTTTTTGCTTTGATTGTTTTATGTAGGAATAGAAATGGTGAAAAAATTGATGAAGTTGCAAGAACTTTGAAACATAATCAGCTTATTGATGAAGGGATTCATGGTGAGAATGTTGGTAATGGTAATGGAAATGGATATTCGTCGGCCGCGGCTATGGCGGTTGCGGCGCCGGTGAATGGTGAGAGAGGTAATGAAGGTGTTGTGATCGGTGGTGGTGAGAAAAAATTGGTTTTTTTTAAGAATTGGGGTAGGGTGTTTGATTTGGAGGATTTGTTAAGGGCTTCTGCTGAGGTATTAGGGAAAGGGACATTTGGGACATCTTATAAGGCAGTTTTGGAGGCTGGTCCTGTGGCTGTAGCTGTGAAGAGGTTAAGGGATGTGACAATTTCTGAGAGGGAGTTTAAGGAGAAGATTGAGAAAGTTGGAACAATGGTTCATGAGAATTTGGCACCTCTTAGGGCTTATTATTATAGTAGAGATGAGAAGCTTCTTGTTCATGATTATTTGCATATGGGAAGTTTATCTGCACTTTTGCATGGAAACAAAGGAGGGGGTAGGACACCATTGACTTGGGAAATGAGATCAGGCATTGCACTTGGAGCTGCTCGCGGCATTGAATACCTACATTCACAAGGTCCTAATGTTTCTCATGGAAACATAAAGTCATCTAACATCTTACTAACCAAGTCCTATGATGCAAGAGTATCTGATTTCGGTCTTGCACATCTTGTTGGTCCTTCATCCACACCCAATAGGGTTGCCGGCTACCGCGCTCCCGAGGTAACCGATCCTCGGAAAGTTTCTCAAAAGGCAGATGTATACAGCTTTGGTGTATTGCTCTTGGAACTTTTGACTGGAAAGGCTCCAACTCACGCCCTCTTGAACGACGAAGGTGTGGACCTTCCGAGATGGGTGCAATCAGTTGTTAAAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAACTTCTTAGGTATCAAAATGTTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCTGTAGATTGTGCTGCTCCATACCCCGATAACCGCCCTTCAATGTCGCAAGTGAGACAGCACATAGAAGAGTTGCATAGGTCTAGCTCGAAAGAGGGTAGTCAAGACCAAATTCAACAGCCTGATGTTATCAGTGACATAGATGATATCTCTTCTAGATGA 2031 0.4436 MKFYFSFFLFFLTLFLPSVKPDLTSERAALLTLRAAVTGRTLLWNTTSASPCNWAGVHCNQNHTHVVELHLPAVALSGNLPTGVFSELPNLHTLSLRFNSLSGPLPSDLAACTSLKNLYLQQNLLSGELPATFFNLTGLVRLNLASNNFSGEIPVGFGNLTRLKTLYLQNNRFTGSLSEFELNPVQLAQFNVSNNMLNGSVPEKLQTFGKDSFLGNLLCGKPLNPCPKEGGTNSGNGGANSGNGGRNSSVVDENNGFVRNKKKGKLSGGAIAGIVIGSVVILLIVVFALIVLCRNRNGEKIDEVARTLKHNQLIDEGIHGENVGNGNGNGYSSAAAMAVAAPVNGERGNEGVVIGGGEKKLVFFKNWGRVFDLEDLLRASAEVLGKGTFGTSYKAVLEAGPVAVAVKRLRDVTISEREFKEKIEKVGTMVHENLAPLRAYYYSRDEKLLVHDYLHMGSLSALLHGNKGGGRTPLTWEMRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNDEGVDLPRWVQSVVKEEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDNRPSMSQVRQHIEELHRSSSKEGSQDQIQQPDVISDIDDISSR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1828 676 Gene3D Ribonuclease Inhibitor 187 226 IPR032675 -
Mtr6g1828 676 PANTHER OS05G0588300 PROTEIN 3 676 - -
Mtr6g1828 676 MobiDBLite consensus disorder prediction 634 676 - -
Mtr6g1828 676 Gene3D Transferase(Phosphotransferase) domain 1 454 673 - -
Mtr6g1828 676 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Mtr6g1828 676 MobiDBLite consensus disorder prediction 229 253 - -
Mtr6g1828 676 MobiDBLite consensus disorder prediction 640 654 - -
Mtr6g1828 676 ProSiteProfiles Protein kinase domain profile. 378 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1828 676 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 676 - -
Mtr6g1828 676 SUPERFAMILY Protein kinase-like (PK-like) 382 650 IPR011009 -
Mtr6g1828 676 MobiDBLite consensus disorder prediction 655 676 - -
Mtr6g1828 676 SUPERFAMILY L domain-like 42 208 - -
Mtr6g1828 676 Pfam Protein kinase domain 381 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1828 676 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Mtr6g1828 676 Gene3D Phosphorylase Kinase; domain 1 357 453 - -
Mtr6g1828 676 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1828 Mtr-Chr6 33266519 33269840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1828 22 665 Receptor kinase-like Gene Family AT1G48480 58.204 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr6g1828 Pkinase 1.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1828 - - gmx:100781597 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3898 8 49576632 49579810 Mtr6g1828 6 33266519 33269840 PCT