Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1827 ATGGTCTTCAAAGGAAGATTCTTCTCTTCCAAAAAATCTGATACTTCTAGTCCTGATGCTTCTTCAAACAGTCCTCGATCTATTTCTTCGAATTCTCCTTCTAGATCTGATAAGAAAAAACCTAAATCGAACATTGTTCAAACCCTAAACGCCGCCGGAACCTCCACCAGCGGCGGCGGAGGAAGTGGCGGTTCCGATAAATTCACCTCTGCTTCTAGCCGGAAGACGAAGAAAGATGTTGTTAAGGGAAAAGAGAGTGAGATTTCGATTCGGTCTGGATCAAAGAAATCGGCTCCGGCGACGGTGAAGGAGTTACCTGAGTTACCGTTACCGTCGTCGTCGACGTCAGCAGCGTCTGTTTCGCCGATTTTAGCGTCGTCGTTAGGGTTGAATAGGATAAAGACGAGATCGGGACCGTTACCGCAGGAGAGTTTTTTCGGTTTTCGAGGTGAAAAAGGAGGAGCTACGGCGGTGTTAGGTGCGAGTAATCTTTCAAGGTCTGGGAAGAAGAAGGAGGTCGGGAATCAGAGTAGAGTAGGGTTTCGAGAAGGTTTGGGAGTTGATAATGGGAGTAATTCGGATACGGGGAGTGGGGGGAGTGGTGTGACGTCGATGGATCAGAGTCCGGTTGTGTTGCCCCGGTCACGGTTGCAGAATGGCGAATCATCTTCCGGAGCAGGAGAGCAGGCATCATCTCAGACTCAGACCGGAGGCCTAAGAAGTGAAGATGTTTGCACTCCAGAGAACACATATGACTTTGAAAATCCGAAAGAATCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCCCCTGGAAAGAGGTTTCCTGGTGATATCAAGAGTTTTTCCCATGAGTTAAATTCTAAAGGTGTCCGGCCCTTTCCATTTTGGAAGCCTCGGAGGTTAAATAATAACCTTGAGGAGATCTTGGTCGTTATTAGGGCCAAATTTGATAAAGAAAAGGAAGAGGTGAACTCAGAGCTGGCAATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCAGATAATCATCCAGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCCAGGCGCTGTGCTATGACCACATCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATTGTTCAGGAATTGGATGATAGGCGTCAAGAGCTACCGCCAGGGACCTTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACACGGTGTACTAGATTGTTGCAATTTCACAAGGAAAGTGCTTTGGCTGAGGATGAACACGTTTTCAATCTTCGTCAATCCAGAGTCTTGCATTCTACTGGAAAATGTATTCCTCCTAGTGTGGGAAAGGATTCTAAAAGTTATAGTGCTGCAAAGATCTCAAAGGCTATATCAAAAAAAGCTTATAGCCAAGAGCAGAGTACCTTGGTTTGGAAGAAAGGTGTTGTGAAACCAGAAATTCAGTTGCCTCCTGCTGATGATGACACTTTAAAAAGCTTCGAGTCTCCTGGCAGGAATCGAATGGCTTCATGGAAAAAATTCCCATCTCCATCGGAAAGAAGCCCAAATGAATCTGCTCAGTTGAAGGACCAAAGTTATGGGACAGTTGAACCTTCAAAGACACCAGATAAGAGATTAACTTCTGATGTAGATCTCTCTGCTGCTAAGCATTCTGAGCTTCTCGCTGTCAAAGATTCCCATGACCATGCTTCCAAGCACCAGCATAAACCTTCCTGGGGATACTGGGACAAGCAGCTTCCTAACGAGGATAGCTCAATCATCTGTCGAATATGTGAAGAGGATGTACCTACTTTACATGTTGAAGATCATTCGAGGATTTGTGCAGTTGCTGACAGATGTGATCAAAAGGGTCTGAGTGTCAATGAGCGTCTTGTAAGAATTTCTGAAACACTTGAAAAGATGATGGAATCATCTACTCAGAAGGATTCCCAGCAAATGGTTGGAAGTCCCGATGTTGCAAAAGTTTCGAATTCAAGCATGACCGAAGAATCTGACGTTGTTTCCCCTAAACTTAGTGATTGGTCACGCAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAAACTGATAATTCTGCTTTTATGGATGACCTAAAGGGATTGCCACTTATATCATGTAGAACTCGTTTTGGTCCAAAGTCTGACCACGGTATGACAACATCATCTGCTGGGAGCATGACTCCTAGGTCTCCTATAATGACACCAAGGACTAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCCCAGATGAATGAACTTGCTGATATAGCACGATGTGCATCCAATGCTAGTCTGGAAGATGATCGCACAGCAGCGTATTTATTATCTTGTCTTGACGACTTGAGGGTTGTCGTAGAGCGAAGGAAGTTTGATGCACTTACCGTGGAAACCTTTGGAACACGCATCGAGAAGCTGATTCGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTCGAAAAGGTAGATGTAGATAGCCCTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTTCACAGCTTGAGAACAAGCCCAATTCATTCTTCCAAGGATCGTACTTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAGAAGAGGACAACCGGTGATCTTTTTGCTATAAAGGTTCTTAAGAAGGCAGATATGATCCGTAAGAATGCTGTAGAAAGCATATTAGCGGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGATTTTTCTATTCTTTTACATGTCGTGAGAACTTATATCTTGTCATGGAGTATCTGAATGGTGGAGACTTGTATTCTTTACTAAGGAATTTAGGATGTCTAGATGAGGAAGTGGCCCGTGTCTATATTGCTGAAGTGGTACTTGCATTAGAGTACTTGCATTCTCTGCGTGTGGTTCATCGTGACTTGAAGCCTGACAATTTATTGATTGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACGGATGATTTGTCTGGTCCAGCTGTGAGTGGGACATCCCTACTTGAGGAGGATGAATCTCATACATATACATCTGAGGATCAAAGGGAACGGAGGAAGAAGCGTTCCGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATGCATATACTGCGGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAACGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGAAGTTCCCGACGAAATGAGTCTTGAAGCACATGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGAGCCAGAGGGGCATCAGAGGTGAAACAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTTCCCGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGTGGCCTTGTATATCCGCCAAGTGATTTTGAAGATTCTAGTGATGCCGATAGCTTAAGTGGAAGCAGCAGTTGCCTGAGCAATCGCCAGGATGAAATGGAGGGTGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTAGTTCTTCAGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAATTATGATCTCACCAAGGGATGGAAAGATGATCCCTCAACAAATTCTAGTGCATAG 3873 0.4395 MVFKGRFFSSKKSDTSSPDASSNSPRSISSNSPSRSDKKKPKSNIVQTLNAAGTSTSGGGGSGGSDKFTSASSRKTKKDVVKGKESEISIRSGSKKSAPATVKELPELPLPSSSTSAASVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGGATAVLGASNLSRSGKKKEVGNQSRVGFREGLGVDNGSNSDTGSGGSGVTSMDQSPVVLPRSRLQNGESSSGAGEQASSQTQTGGLRSEDVCTPENTYDFENPKESESPRFQAILRVTSAPGKRFPGDIKSFSHELNSKGVRPFPFWKPRRLNNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGVLEKNADNHPEWQETIEDLLILARRCAMTTSGEFWLQCESIVQELDDRRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESALAEDEHVFNLRQSRVLHSTGKCIPPSVGKDSKSYSAAKISKAISKKAYSQEQSTLVWKKGVVKPEIQLPPADDDTLKSFESPGRNRMASWKKFPSPSERSPNESAQLKDQSYGTVEPSKTPDKRLTSDVDLSAAKHSELLAVKDSHDHASKHQHKPSWGYWDKQLPNEDSSIICRICEEDVPTLHVEDHSRICAVADRCDQKGLSVNERLVRISETLEKMMESSTQKDSQQMVGSPDVAKVSNSSMTEESDVVSPKLSDWSRRGSEDMLDCFPETDNSAFMDDLKGLPLISCRTRFGPKSDHGMTTSSAGSMTPRSPIMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCASNASLEDDRTAAYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKVDVDSPVMDDDVILEDDVVHSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLEEDESHTYTSEDQRERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPEVPDEMSLEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLSRQKAAFVPASESALDTSYFTSRYSWNTSDGGLVYPPSDFEDSSDADSLSGSSSCLSNRQDEMEGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA* 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 188 243 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 1033 1066 - -
Mtr6g1827 1290 Gene3D Phosphorylase Kinase; domain 1 875 1195 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 722 740 - -
Mtr6g1827 1290 Coils Coil 306 326 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 720 740 - -
Mtr6g1827 1290 ProSiteProfiles Protein kinase domain profile. 877 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1827 1290 Gene3D Transferase(Phosphotransferase) domain 1 961 1184 - -
Mtr6g1827 1290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 1048 1066 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 1210 1244 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 1217 1233 - -
Mtr6g1827 1290 PANTHER SERINE/THREONINE-PROTEIN KINASE 69 1288 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 9 32 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 490 547 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 159 260 - -
Mtr6g1827 1290 Pfam Protein kinase domain 877 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 71 91 - -
Mtr6g1827 1290 ProSiteProfiles AGC-kinase C-terminal domain profile. 1167 1273 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr6g1827 1290 SMART serkin_6 877 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1827 1290 CDD STKc_MAST_like 883 1171 - -
Mtr6g1827 1290 SUPERFAMILY Protein kinase-like (PK-like) 874 1210 IPR011009 -
Mtr6g1827 1290 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 69 1288 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 43 70 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 1 119 - -
Mtr6g1827 1290 MobiDBLite consensus disorder prediction 517 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1827 Mtr-Chr6 33250595 33261869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1827 85 1284 AGC Kinase Gene Family AT3G17850 68.322 0.0 1620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Mtr6g1827 Pkinase 1.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1827 - - cam:101496611 2133.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1827 6 33250595 33261869 Mtr6g1827 6 33250595 33261869 ECH