Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1816 ATGGCTATGCAATTACCTTCTTCATCCTTGTCCTCCACCCTCTCTAATGATTTCATCTATGACGTGTTCATTAGTTTCAGGGGTACCGACACTCGATTCGGTTTTACCGGTAATCTTTATAAAGCTCTTTCTGACAAAGGAATCCACACCTTTATTGATGACAAAGAGCTTAAGAGAGGTGACGAAATCACACCTTCGCTCCGCAAGAGCATTGAAGATTCGAGAATTGCCATTATCGTCTTCTCTAAAGACTATGCTTCTTCTTCATTTTGTTTAGACGAACTTGTCCACATCATTCACTACTTCAAGGAAAAGAGTCGCCTTGTTCTACCAATTTTCTATGGCACCGAACCTTCGCAGGTGCGAAAACTGAATGACAGTTATGGTGAATCATTTGCTAAGCATGAAGAGGGGTTTCAAAATAACAAGGAACACATGGAGCGGTTGCTGACATGGAAGAAAGCTCTTAACGAAGCTGCTAACTTATCTGGACATCATTTCAATCAAGGAAATGAATATGAACGTGATTTTATTGAAAAAATAGTTAGAGACGTCTCCAACAAGATTAACCAAATTCCTTTACATGTTACTGATTACCTTGTTGGTCTTCGATCTCGAATTTCAGAAGTGAATTCACTTCTAGACTTGGGATATAATGGAGTATGCATAATAGGAATCGTTGGAACTGGTGGAATGGGCAAGACAACTCTTGCTCAAGCAATTTATAATTTGATTGCTAATCAATTTGAATGTAAGTGTTTCCTTCACAATGTGAGAGAAAATTCAGTTCAACATGGCTTAGAGTATCTTCAAGAGCAGCTTCTCTTTAAATCAATCGGATTTGAAACTAAGTTTGGACATGTTAATGAAGGAATTCCAATCATAAAGCGAAGGCTATGTCAAAAGAAAGTTTTGTTGATTCTCGATGACATTGACAAACTAAAGCAATTGCAGGTTTTGGTCGGAGAGCCTAGCTGGCTCGGTCGTGGCAGCAGAGTCATCATTACCACTCGAGACAAACATTTGTTATCATCTCATGGGATTACAAAAATATACGAAGCATATGGTTTAAATAAGGAACAAGCTCTTGAATTGTTAAGAACAAAGGCTTTTAAAAGTAAAAAAAATGATTCAAGCTATGATTACATTTTAAACCGTGCAATTAAATATGCTTCTGGCCTTCCATTAGCTTTAGAAGTTGTGGGTTCCAACTTGTTTGGAATGAGTACAACAGAATGCGAGTCTACATTAGATAAGTATGAAAGAATTCCACCTGAAGATATCCAAAAAATACTTAAAGTAAGCTTTGACGCTTTGGACGAAGAACAACAGAGTGTCTTTTTGGATATTGCTTGTTTCTTTAATTGGTGTGAATCGGCATATGTCGAAGAGATACTTGAATATCATTATGGTCATTGCATAAAAAGCCACCTCAGAGCGCTGGTTGATAAATCTCTCATAAAGACTAGTATTCAAAGACACGGAATGAAATTTGAGTTGGTGACATTACATGACTTGTTAGAGGACATGGGTAAAGAAATCGTCCGACATGAATCAATTAAAGAGCCTGGAGAACGTAGTAGGTTGTGGTATCACGATGATATATTTGATGTTTTACAGAACAACAAAGGCACGAATAAAATTGAAAAGATATTTCTAAGTTGTCCCTCCATGAAACTCACAAGAAACAATGGAGAGGCCTTCAAGAAGATGACAAATATCAAAACACTTATCATAAGAAATAGTCAATTCTCCAAAAGTCTGAAGTATCTTCCAAGTACTTTGAAAGTATTGATATGGGAAAGATATTGCTTGCCCTCTCTATCATCTAGTATATTTAGCCAGGAATTCAACTATATGAAAGTCTTGATATTGAACCATTTTTACTCTTTAACTCATATACCCGATGTCTCAGGTCTTCCAAATTTAGAAAAGATCTCATTAAAAAAGTGTTGGAACTTAATTACAATTCACAATTCAATTGGATGCCTAAGTAAACTTGAAATCATAAATGCAAGGAAATGCTATAAGCTCAAAAGTTTTCCACCCTTACGGCTGCCCTCTCTTAAGGAATTGAAACTTTCTGAGTGTTGGAGTCTCAAGAGTTTTCCAGAATTATTGTGCAAGATGACAAATTTGAAAAGTATTTTGTTGGACGGTACTTCCATAGGAGAATTGCCATTTTCATTTCAAAATCTCAGTGAACTTCGTGACTTACAAATAACTAGAAGTAATATCCATAGGTTCCCTACTTCTTCAAAAAATTCAAAAAAAAGAATGCTCAGGTTCCGTAAAGATGATGATAAAATTAATTCTATAGTGTTATCAAGTGTGAAACATCTTAATCTCCACGATAACATCCTTTCAGATGAATGTCTTCCAATACTTCTCAAGTGGTTTGTTAATGTGAAATATCTAGACTTGTCTAACAATGATTTCAAAATTCTTCCCGAGTGCCTTAGTGAATGTCGCCATCTTAAGGATCTTAAATTGGATTATTGCTGGGCTCTTGAAGAAATTAGATGGATTCCACCCAATCTATATTGCTTGTCTACAATAAGATGCAATTCATTGAATTCCACAAGTAGAAGAATGTTATTGGGTCAGGTTGGATGCAGCGATATTTATTCACCAACCAGAAAAGAGGGGATTCCAGATTGGTTCGAGCACCAAATGGAGGGAGACACAATTTCTTTCTGGTTTCGCAAAAAGATCCCTTCTATTACTTGTATTCTTCGTACTCGTACTCGACCAAAAAGAGGGGATTCCAGTTGGCCTCGACTAAAAATCAATTATTTTGTGAATGGCTATGAATGTACTGATGAAATTTGGATACATTATTCATTTCTCTATCGGTACTCGGAAGAGACATGTTTGTTGAATCTGAAATTGGAAGAACGGGTTAAATGGTCAAATCTCATGTCTGAAATGGACAAAGCACTTTTAAAAAATGAATGGATCCATGTGCAGATTTATTTTGAGAATGTTCTTTATCATGCAAAAAAGGGAATCCATGTGCGGAAGGAGAAAAGCAACAAGGATGAGGATGTGATATTCACTAATCCTTATGTAGAAAATAACAATACTTCATCATCACAATTTCACACGAATCTCGTGTCAGAAATGGACAAATCTTGTGTGGATGAGGAGACTAATTTAGTGGATTATTATTCTACTAAAGATGAGGAGAGTTTTTTCTGGAGTGAATTCCGTGAACAATTCGAAATAGATAATATCATGTATACCGACGATGAGAAAATGAGTTTGTGGAGTTATTATGAAATCAAATTTAGTGAACAAATGAGAATCCACATGTTGAAGGAGTAA 3327 0.3595 MAMQLPSSSLSSTLSNDFIYDVFISFRGTDTRFGFTGNLYKALSDKGIHTFIDDKELKRGDEITPSLRKSIEDSRIAIIVFSKDYASSSFCLDELVHIIHYFKEKSRLVLPIFYGTEPSQVRKLNDSYGESFAKHEEGFQNNKEHMERLLTWKKALNEAANLSGHHFNQGNEYERDFIEKIVRDVSNKINQIPLHVTDYLVGLRSRISEVNSLLDLGYNGVCIIGIVGTGGMGKTTLAQAIYNLIANQFECKCFLHNVRENSVQHGLEYLQEQLLFKSIGFETKFGHVNEGIPIIKRRLCQKKVLLILDDIDKLKQLQVLVGEPSWLGRGSRVIITTRDKHLLSSHGITKIYEAYGLNKEQALELLRTKAFKSKKNDSSYDYILNRAIKYASGLPLALEVVGSNLFGMSTTECESTLDKYERIPPEDIQKILKVSFDALDEEQQSVFLDIACFFNWCESAYVEEILEYHYGHCIKSHLRALVDKSLIKTSIQRHGMKFELVTLHDLLEDMGKEIVRHESIKEPGERSRLWYHDDIFDVLQNNKGTNKIEKIFLSCPSMKLTRNNGEAFKKMTNIKTLIIRNSQFSKSLKYLPSTLKVLIWERYCLPSLSSSIFSQEFNYMKVLILNHFYSLTHIPDVSGLPNLEKISLKKCWNLITIHNSIGCLSKLEIINARKCYKLKSFPPLRLPSLKELKLSECWSLKSFPELLCKMTNLKSILLDGTSIGELPFSFQNLSELRDLQITRSNIHRFPTSSKNSKKRMLRFRKDDDKINSIVLSSVKHLNLHDNILSDECLPILLKWFVNVKYLDLSNNDFKILPECLSECRHLKDLKLDYCWALEEIRWIPPNLYCLSTIRCNSLNSTSRRMLLGQVGCSDIYSPTRKEGIPDWFEHQMEGDTISFWFRKKIPSITCILRTRTRPKRGDSSWPRLKINYFVNGYECTDEIWIHYSFLYRYSEETCLLNLKLEERVKWSNLMSEMDKALLKNEWIHVQIYFENVLYHAKKGIHVRKEKSNKDEDVIFTNPYVENNNTSSSQFHTNLVSEMDKSCVDEETNLVDYYSTKDEESFFWSEFREQFEIDNIMYTDDEKMSLWSYYEIKFSEQMRIHMLKE* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1816 1108 CDD AAA 201 339 - -
Mtr6g1816 1108 PANTHER ARCHAEAL ATPASE 30 993 - -
Mtr6g1816 1108 SMART till_3 19 162 IPR000157 GO:0007165
Mtr6g1816 1108 PRINTS Disease resistance protein signature 223 238 - -
Mtr6g1816 1108 PRINTS Disease resistance protein signature 298 312 - -
Mtr6g1816 1108 PRINTS Disease resistance protein signature 391 405 - -
Mtr6g1816 1108 PRINTS Disease resistance protein signature 684 700 - -
Mtr6g1816 1108 Gene3D - 190 351 IPR027417 -
Mtr6g1816 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 993 IPR044974 GO:0006952
Mtr6g1816 1108 Gene3D - 356 440 IPR042197 -
Mtr6g1816 1108 ProSiteProfiles TIR domain profile. 18 189 IPR000157 GO:0007165
Mtr6g1816 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 450 IPR027417 -
Mtr6g1816 1108 Gene3D - 19 189 IPR035897 -
Mtr6g1816 1108 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 164 IPR035897 -
Mtr6g1816 1108 Pfam TIR domain 20 193 IPR000157 GO:0007165
Mtr6g1816 1108 Gene3D Ribonuclease Inhibitor 770 867 IPR032675 -
Mtr6g1816 1108 Gene3D Ribonuclease Inhibitor 537 769 IPR032675 -
Mtr6g1816 1108 Pfam NB-ARC domain 216 408 IPR002182 GO:0043531
Mtr6g1816 1108 SMART AAA_5 220 357 IPR003593 -
Mtr6g1816 1108 SUPERFAMILY L domain-like 517 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1816 Mtr-Chr6 33071426 33080611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1816 20 829 WRKY Transcription Factor Family AT4G12020 29.070 4.57e-71 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1816 - - mtr:MTR_6g072590 1058.9