Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1798 ATGAGCTTGGTCTTTGACATAACCTTTTTATATATGTTTTTGTTCATTCTTTCATTGAACATAGTCTTGTGTATTGAAATTGAAATCAAGGATTTTCATCCACAAGAAAGAGATGCTTTATTACTCATAAGGGATTCATTAAATTCTTCATCTATAAATTTGCATAGAAATTGGACAGGACCACCTTGTATAGAAAACAACCTTAGTATATGGTTTGGAATCGCTTGTTCAAATTGGCATGTTGTTCATATTACAATTCAAGGAGTCAACCTCAGTGGCTATTTACCTTCAACATTTCTTCAAAACATAACTTTCTTGAGGCAAATTGATTTCAGAAACAATGCACTTTTTGGATTATTGCCAAATCTTACAGGTTTGGTTTTCTTAGAAGAAGTTAAGCTTTCTTTTAATCATTTCTCAGGTTCAATTCCTTTGGAATATGTTGAATTGTATAATCTAGATATTTTGGAGTTGCAAGAAAATTATTTGGATGGTGAAATTCCACCTTTTGATCAACCATCATTGATAAGTTTCAATGTGTCATATAATCATTTGGTAGGGAAAATTCCTGAAACTTCTTTGCTTCAAAGGTTTCCAAAGAGTTCTTTTGATGATAATTCTGATCTTTGTGGAAAACCATTGGATAAGTCATGTTCTGCTGAATCTCCTGCACCACTTCCTTTTGCTATTGCACCTACTTCTTCAATGGAAACAAATAAGACGAGGATTCATGTTTGGATTATTGCTTTGATTGCTGTTGTTGCTGCTTTGTGTATTTTTCTGATGATTATTGCTTTCTTGTTTTGTAAAAGAAAAGCCAGAGGAAATGAAGAGAGAATAAATGATTCAGCAAGGTATGTTTTTGGAGCATGGGCAAAGAAGATGGTATCTATTGTAGGAAACAGTGAGGATTCTGAAAAATTAGGCCAATTAGAATTTTCAAACAAGAAATTTCAAGTTTTTGATATGGATGATTTGTTAAGGGCATCAGCAGAAGTGCTAGGAGGAGGAGATTTTGGTGTTACATATAAAGCAACACTTGAAACTGGTAATGTTGTTGCAGTAAAGAGACTTGGCTACATGAATGACTTGAGCAAGAAGGAATTTATTCAACAGATGCAATTGCTAGGAGAGATAAAGCATGAAAATGTAGCTGAAATTATCTCCTTTTTTCATTCAGAAGATCAAAAGCTTGTCATATATGAACTTGTCTCTGATGGTACTTTGTCTGAGCTTCTACATGAGGGTAGAGGAATTGGAAGAATACCTCTTGATTGGACAACAAGACTTGCCATTATCAAAGACATAGCAAAAGGTCTTGATTTCCTTCACCAATTTTTGTCTTCTCACAAAGTTCCACATGCAAATCTCAAATCATCCAATGTTCTAATCCATCAAGACAACCAAGGCTACCATTCCAAGCTCACTGACTATGGCTTCCTACCTTTACTCTCATCATCTATGAAAAATGCAGAAAAGCTATCAATAAGCAAGTCACCAGAATTTGTTAAAAGGAAAAAGTTGACACACAAAACTGATGTATATTGTTTTGGTATCATTATGCTAGAGATTATAACAGGAAAAATTCCTGGTCATATATTAGGCAATGAAGTTGAAGAAACAAGTAATGATCTTTCAGATTGGGTTAGAACTGTGGTGAATAATGATTGGTCTACAGATATATTTGATTTGGAAATATTAGCAGAAAAAGATGGACATGATGCAATGTTGAATTTAACTGAGATAGCATTGGAGTGTACTGATATGATGCCTGAGAAAAGGCCTAAAATGAGTTTAGTGTTGAAGAGAATTGAAGAGATAGAGCAAATGATGAAAGACAATGAGTGA 1848 0.3387 MSLVFDITFLYMFLFILSLNIVLCIEIEIKDFHPQERDALLLIRDSLNSSSINLHRNWTGPPCIENNLSIWFGIACSNWHVVHITIQGVNLSGYLPSTFLQNITFLRQIDFRNNALFGLLPNLTGLVFLEEVKLSFNHFSGSIPLEYVELYNLDILELQENYLDGEIPPFDQPSLISFNVSYNHLVGKIPETSLLQRFPKSSFDDNSDLCGKPLDKSCSAESPAPLPFAIAPTSSMETNKTRIHVWIIALIAVVAALCIFLMIIAFLFCKRKARGNEERINDSARYVFGAWAKKMVSIVGNSEDSEKLGQLEFSNKKFQVFDMDDLLRASAEVLGGGDFGVTYKATLETGNVVAVKRLGYMNDLSKKEFIQQMQLLGEIKHENVAEIISFFHSEDQKLVIYELVSDGTLSELLHEGRGIGRIPLDWTTRLAIIKDIAKGLDFLHQFLSSHKVPHANLKSSNVLIHQDNQGYHSKLTDYGFLPLLSSSMKNAEKLSISKSPEFVKRKKLTHKTDVYCFGIIMLEIITGKIPGHILGNEVEETSNDLSDWVRTVVNNDWSTDIFDLEILAEKDGHDAMLNLTEIALECTDMMPEKRPKMSLVLKRIEEIEQMMKDNE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1798 615 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Mtr6g1798 615 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 12 609 - -
Mtr6g1798 615 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Mtr6g1798 615 Gene3D Phosphorylase Kinase; domain 1 293 403 - -
Mtr6g1798 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 609 - -
Mtr6g1798 615 Gene3D Ribonuclease Inhibitor 33 220 IPR032675 -
Mtr6g1798 615 SUPERFAMILY Protein kinase-like (PK-like) 332 605 IPR011009 -
Mtr6g1798 615 ProSiteProfiles Protein kinase domain profile. 328 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1798 615 Pfam Protein tyrosine and serine/threonine kinase 332 602 IPR001245 GO:0004672|GO:0006468
Mtr6g1798 615 Gene3D Transferase(Phosphotransferase) domain 1 404 615 - -
Mtr6g1798 615 SUPERFAMILY L domain-like 33 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1798 Mtr-Chr6 32827482 32830749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1798 36 608 Receptor kinase-like Gene Family AT1G48480 33.756 6.87e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr6g1798 PK_Tyr_Ser-Thr 5.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1798 - - gmx:102668068 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1798 6 32827482 32830749 Mtr6g1798 6 32827482 32830749 ECH