Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1794 ATGACAAAATCATTTCATTTTGTTCTGTCTTTGTTCCTCTTATTATTAAACCAAACAAATTCTCAGTCTCATATATATGATCAAGAACACAAAGTCCTATTAAACATTAAACAATACCTTAACAACACTTCTTTCCTTAACCATTGGACAACATCATCAAATTCCAATCATTGTTCTTGGAAAGGAATCACTTGCACAAATGATTCTGTTTCTGTCACTGGAATAACACTTTCACAGATGAATATCACACAAACAATACCACCCTTTATTTGTGATGAACTCAAAAGCCTTACACATGTTGACTTCAGTTCCAACTTCATCCCTGGTGATTTTCCAACACTATTCTATAATTGTTCAAAGCTTGTTTACTTAGATCTTTCTATGAACAATTTTGATGGTATTATTCCTAATGATATTGGAAATTTGAGTACTAGTTTGCAATATCTTAATCTTGGTTCAACAAATTTTCATGGTGGTGTTCCTGATGGGATTGGAAAGTTGAAGGAGTTGAGAGAGCTTAGAATTCAATATTGTTTATTGAATGGTACTGTTTCTGATGAGATTGGTGAATTGTTGAATCTTGAGTATTTGGATTTGTCTTCTAATACTATGTTTCCTTCTTGGAAATTGCCTTTCAGTTTGACCAAGTTGAACAAATTGAAGGTTCTTTATGTTTATGGCTCTAACTTGATTGGTGAAATACCTGAAAAAATTGGAGATATGGTTTCTTTGGAGACGTTGGATATGTCAAGAAATGGTTTAACTGGTGAAATTCCTAGTGGTTTGTTCATGCTGAAGAATCTGAGTCAACTTTTTCTTTTCGATAACAAGCTTTCTGGTGAAATTCCTAGTGGTTTGTTCATGCTGAAGAATCTGAGTCAACTTTCTATTTACAATAATAAGCTTTCTGGTGAAATACCTAGTTTGGTTGAAGCATTGAACTTGACTATGCTTGATCTTGCTAGGAACAATTTTGAAGGGAAAATACCTGAAGATTTTGGAAAGCTTCAAAAGTTAACATGGTTGAGTTTGTCTCTCAATAGTTTATCAGGTGTGATACCAGAAAGTATAGGCCATCTTCCGTCTCTTGTTGATTTTCGTGTTTTTTCGAACAATTTATCAGGTACTATTCCTCCTGAATTCGGTCGCTTTTCAAAGCTCAAAACCTTTCATGTTTCCAACAATAGTCTTATTGGAAAGTTACCTGAGAATTTATGCTATTATGGTGAGTTACTCAACTTAACAGCTTATGAAAATAGTCTTAGTGGTGAATTACCAAAATCACTAGGAAATTGTAGTAAGTTGTTGGACTTGAAAATTTATAGTAATGAATTTACTGGTACTATTCCTAGAGGTGTTTGGACATTTGTCAATTTGTCAAATTTCATGGTAAGCAAGAATAAGTTCAATGGTGTTATTCCAGAAAGATTGTCTTTAAGCATTTCGCGATTCGAGATAGGTAACAATCAGTTTTCTGGTAGAATTCCATCTGGTGTATCTTCATGGACTAATGTGGTAGTTTTTAATGCAAGGAACAATTTCTTAAATGGAAGTATTCCACAAGAGTTAACATCACTTCCAAAATTAACAACTCTTTTGCTTGATCAGAATCAGTTCACTGGTCAAATTCCATCTGATATAATATCATGGAAGTCCTTAGTAACTCTTAATTTGAGCCAGAACCAACTTTCTGGACAAATTCCAGATGCAATTGGAAAATTACCTGTCCTAAGTCAACTTGATTTGTCAGAAAATGAACTTTCTGGCGAAATTCCATCTCAACTTCCAAGACTCACCAATCTCAATCTATCCTCTAATCATTTGATAGGAAGGATTCCAAGTGACTTTCAAAATTCAGGGTTCGATACAAGCTTTTTGGCTAATTCTGGTCTTTGTGCCGATACACCAATACTGAACATCACTTTGTGCAACTCTGGTATTCAAAGTGAAAACAAAGGATCATCATGGTCTATTGGTTTGATTATAGGCCTTGTGATAGTAGCAATCTTTTTGGCTTTTTTTGCTGCTTTCTTGATTATCAAAGTTTTCAAGAAAGGAAAGCAAGGTTTGGATAATTCATGGAAGCTTATTTCCTTTCAAAGGCTTAGTTTCAATGAATCAAGCATTGTCTCATCAATGACAGAACAAAATATTATTGGAAGTGGCGGATTTGGCACGGTATACCGAGTTGAAGTCAATGGTTTAGGCAATGTTGCTGTGAAAAAGATAAGGAGTAACAAAAAGTTAGATGATAAACTCGAGAGTTCGTTTCGCGCAGAAGTTAAAATACTGAGCAATATTCGTCATAACAACATTGTGAAATTATTGTGTTGTATCTCTAATGATGATTCTATGCTTCTTGTCTATGAGTATCTTGAAAAAAAAAGTCTAGATAAGTGGCTGCACATGAAGAGTAAGTCGTCGTCATCAACTTTGTCAGGCTTAGTACAAAAACAGGTGGTTCTTGATTGGCCAAAGAGATTGAAAATAGCTATTGGTACTGCTCAAGGTTTGAGCTACATGCATCATGATTGTTCACCACCTATTGTACATAGAGATGTTAAAACAAGCAACATACTTTTGGATGCTCATTTCAATGCAAAAGTTGCTGATTTTGGTCTAGCTAGGATTTTAATCAAGCCAGAAGAACTTAACACAATGTCAGCTGTGATTGGCTCATTTGGCTACATTGCTCCAGAATATGTTCAAACAACAAGAGTTACTGAAAAGATTGATGTGTTTAGCTTTGGAGTAGTCCTATTGGAACTAACAACTGGTAAAGAAGCTAACTATGGAGACCAATACTCGTCTCTTTCGGAGTGGGCGTGGCGTCACATTTTGCTAGGAACCAATGTAGAAGAATTACTAGACAAAGATGTGATGGAAGCAAGTTACATGGATGAAATGTGTACAGTTTTCAAACTTGGTGTCATGTGTACAGCAACATTGCCTTCTAGTAGGCCTTCCATGAAAGAAGTGTTGCAGACATTGCTTAGCTTTGCAGAGCCATTACCTTATGTTGAGAAGAAAGTTGGCCACTACTATGATGCTGATCCTCTTCTTAAGGATTCAAAAAAGGACACTAGGTTTGATGTTGATGATGATGATGATGATATGTGA 3120 0.3526 MTKSFHFVLSLFLLLLNQTNSQSHIYDQEHKVLLNIKQYLNNTSFLNHWTTSSNSNHCSWKGITCTNDSVSVTGITLSQMNITQTIPPFICDELKSLTHVDFSSNFIPGDFPTLFYNCSKLVYLDLSMNNFDGIIPNDIGNLSTSLQYLNLGSTNFHGGVPDGIGKLKELRELRIQYCLLNGTVSDEIGELLNLEYLDLSSNTMFPSWKLPFSLTKLNKLKVLYVYGSNLIGEIPEKIGDMVSLETLDMSRNGLTGEIPSGLFMLKNLSQLFLFDNKLSGEIPSGLFMLKNLSQLSIYNNKLSGEIPSLVEALNLTMLDLARNNFEGKIPEDFGKLQKLTWLSLSLNSLSGVIPESIGHLPSLVDFRVFSNNLSGTIPPEFGRFSKLKTFHVSNNSLIGKLPENLCYYGELLNLTAYENSLSGELPKSLGNCSKLLDLKIYSNEFTGTIPRGVWTFVNLSNFMVSKNKFNGVIPERLSLSISRFEIGNNQFSGRIPSGVSSWTNVVVFNARNNFLNGSIPQELTSLPKLTTLLLDQNQFTGQIPSDIISWKSLVTLNLSQNQLSGQIPDAIGKLPVLSQLDLSENELSGEIPSQLPRLTNLNLSSNHLIGRIPSDFQNSGFDTSFLANSGLCADTPILNITLCNSGIQSENKGSSWSIGLIIGLVIVAIFLAFFAAFLIIKVFKKGKQGLDNSWKLISFQRLSFNESSIVSSMTEQNIIGSGGFGTVYRVEVNGLGNVAVKKIRSNKKLDDKLESSFRAEVKILSNIRHNNIVKLLCCISNDDSMLLVYEYLEKKSLDKWLHMKSKSSSSTLSGLVQKQVVLDWPKRLKIAIGTAQGLSYMHHDCSPPIVHRDVKTSNILLDAHFNAKVADFGLARILIKPEELNTMSAVIGSFGYIAPEYVQTTRVTEKIDVFSFGVVLLELTTGKEANYGDQYSSLSEWAWRHILLGTNVEELLDKDVMEASYMDEMCTVFKLGVMCTATLPSSRPSMKEVLQTLLSFAEPLPYVEKKVGHYYDADPLLKDSKKDTRFDVDDDDDDM* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1794 1039 SUPERFAMILY L domain-like 214 596 - -
Mtr6g1794 1039 ProSiteProfiles Protein kinase domain profile. 713 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1794 1039 Pfam Leucine Rich Repeat 597 618 IPR001611 GO:0005515
Mtr6g1794 1039 Pfam Leucine Rich Repeat 120 142 IPR001611 GO:0005515
Mtr6g1794 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Mtr6g1794 1039 SUPERFAMILY Protein kinase-like (PK-like) 709 997 IPR011009 -
Mtr6g1794 1039 Gene3D Transferase(Phosphotransferase) domain 1 792 1009 - -
Mtr6g1794 1039 SUPERFAMILY L domain-like 27 307 - -
Mtr6g1794 1039 Pfam Protein kinase domain 715 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1794 1039 Gene3D Ribonuclease Inhibitor 25 140 IPR032675 -
Mtr6g1794 1039 Gene3D Ribonuclease Inhibitor 208 355 IPR032675 -
Mtr6g1794 1039 Gene3D Ribonuclease Inhibitor 482 641 IPR032675 -
Mtr6g1794 1039 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Mtr6g1794 1039 PRINTS Leucine-rich repeat signature 577 590 - -
Mtr6g1794 1039 PRINTS Leucine-rich repeat signature 595 608 - -
Mtr6g1794 1039 SMART LRR_typ_2 551 574 IPR003591 -
Mtr6g1794 1039 SMART LRR_typ_2 289 313 IPR003591 -
Mtr6g1794 1039 SMART LRR_typ_2 241 265 IPR003591 -
Mtr6g1794 1039 SMART LRR_typ_2 526 550 IPR003591 -
Mtr6g1794 1039 SMART LRR_typ_2 336 359 IPR003591 -
Mtr6g1794 1039 SMART LRR_typ_2 595 618 IPR003591 -
Mtr6g1794 1039 Gene3D Ribonuclease Inhibitor 407 481 IPR032675 -
Mtr6g1794 1039 Gene3D Ribonuclease Inhibitor 356 406 IPR032675 -
Mtr6g1794 1039 Gene3D Phosphorylase Kinase; domain 1 692 791 - -
Mtr6g1794 1039 CDD STKc_IRAK 719 997 - -
Mtr6g1794 1039 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 284 - -
Mtr6g1794 1039 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 273 1029 - -
Mtr6g1794 1039 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Mtr6g1794 1039 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 273 1029 - -
Mtr6g1794 1039 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 284 - -
Mtr6g1794 1039 SMART serkin_6 713 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1794 1039 Pfam Leucine rich repeat 314 373 IPR001611 GO:0005515
Mtr6g1794 1039 Gene3D Ribonuclease Inhibitor 141 207 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1794 Mtr-Chr6 32790117 32794042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1794 10 1036 Receptor kinase-like Gene Family AT5G25930 47.110 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr6g1794 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1794 - - gmx:100789972 1393.64