Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1768 ATGGAGATAGAACAAAGTTACAAACCAAGTTCATTAGGAAATGAAGTAACATCAAATTTACCATCTTTGAGTCCATTGAGTGAAACCCTATGGAGAGAAAAAGCAAAACCAGATATCATTGGTGATGTTTCAGCAAGATTAACATGGAAAGATTTAACTGTTATGGTAACCCTAAGCAATGGTGAAATACAAAATGTTCTTGAGAATTTAACTGGTTATGCTGAACCAGGCTATTTCACTGCTCTTATGGGACCTTCTGGTTCTGGAAAATCAACTCTTCTTGATGCACTTTCTAGTCGTTTAGCTTCTAATGCTTTTCTTTCTGGTACTATTCTTCTCAATGGTCGCAAAGAAAAGTTATCTTTTGGAACTGCTGCCTATGTGACACAAGATGACAACTTGATTGGAACCTTAACAGTAAGAGAAACAATATGGTATTCAGCTAGGTTAAGATTACCAGATAAAATGTCAAGATCAGATAAAAGAGCATTAGTTGAAAGCACAATTGTTGCAATGGGTCTTCAAGATTGTGCCGACACAGTTATTGGTAATTGGCATTTACGTGGGATAAGTGGTGGTGAAAAAAGAAGAGTTAGTATTGCATTGGAAATATTGATGAGACCTAGATTGCTTTTCCTTGATGAACCAACCAGTGGTCTTGACAGTGCTTCAGCTTTCTTTGTGACTCAAACACTACGTGCATTGGCAAGGGATGGAAGAACAGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTATTTGCTTTCTGGTGGCAAAACTGTTTATTTTGGACAAGCCTCAGATGCATATGAGTTCTTTGCACAAGCTGGATTTCCATGCCCTGCTTTGAGGAACCCTTCTGATCATTTCCTTAGATGCATCAATTCTGACTTTGATAAGGTCAAAGCCACTCTTAAAGGGTCCATGAAATTGAGGTTTGAGGCAAGTGATGATCCTCTAGATAAGATCACCACTGCTGAAGCAATCAGAACACTTATTGACCACTACCGCACTTCTCAACACTCTTATGCAGCAAGACAAAAAGTTGATGACATATCCAAAGTTAGAGGGACAGTGCTTGAAGCAGGAGGAAGTGAAGCAAGTTTCTTGTTGCAATGTTACATATTAACCAAACGTTCCTTCATTAACATGTCAAGGGACTTTGGTTACTATTGGCTTAGGCTTGTAATCTACATTGTTGTCACTATCTGCATTGGAACCATTTACTTGAATGTTGGAACTGGCTACAACTCAATTCTGGCTAGGGGTTCATGTGCATCTTTTGTGTTTGGATTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCGTTTGTTGAAGATATGAAGGTTTTTCAAAGGGAGAGGCTAAATGGACACTATGGTGTGACTGCATTTGTTATTAGCAACACATTATCTGCAACACCATTTCTCATATTAATCACTTTTCTCTCTGGAACAATTTGTTACTTCATGGTTAACCTACATCCTGGATTTTCTCATTACGTTTTCTTTGTGCTGGCCCTTTATGCAAGTGTCACAGTTGTTGAAAGCTTAATGATGGCAATTGCTAGTATTGTTCCTAACTTCCTCATGGGCATTATCATTGGAGCAGGAATTCAAGGTATCTTCATGTTGGTCTCTGGCTACTTTAGGCTCCCACATGATATCCCAAAGCCTGTTTGGCGTTATCCAATGTCATACATCAGTTTCCACTATTGGGCATTACAGGGCCAATACCAGAACGATCTTAGGGGTTTGTTATTCGACGGTGAAACACCTGATATGCCAAAGATAGCTGGCGAATACATCTTAGAGTACGTATTCCAAATCACTGTGACTAGATCAAAATGGATAGATTTATCGGTCATCTTAAGCATGATTATCATATACCGCATTATCTTCTTCGTCATGATCAAGGTCAATGAGGATGTTACTCCATGGGTTAGAGGGTATCTTGCTAGGAGAAGAATTCAACAGAAGAGTGGAGCTCAAAATACAACTATTGCACCTGATGTTCTCACCCAGTCTCCATCTTTGAGAAACTACATTTCTAATCAAAGTAGGAATTAG 2094 0.3892 MEIEQSYKPSSLGNEVTSNLPSLSPLSETLWREKAKPDIIGDVSARLTWKDLTVMVTLSNGEIQNVLENLTGYAEPGYFTALMGPSGSGKSTLLDALSSRLASNAFLSGTILLNGRKEKLSFGTAAYVTQDDNLIGTLTVRETIWYSARLRLPDKMSRSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEASDDPLDKITTAEAIRTLIDHYRTSQHSYAARQKVDDISKVRGTVLEAGGSEASFLLQCYILTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSATPFLILITFLSGTICYFMVNLHPGFSHYVFFVLALYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHYWALQGQYQNDLRGLLFDGETPDMPKIAGEYILEYVFQITVTRSKWIDLSVILSMIIIYRIIFFVMIKVNEDVTPWVRGYLARRRIQQKSGAQNTTIAPDVLTQSPSLRNYISNQSRN* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1768 697 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 21 692 - -
Mtr6g1768 697 SMART AAA_5 76 247 IPR003593 -
Mtr6g1768 697 Pfam ABC transporter 67 218 IPR003439 GO:0005524
Mtr6g1768 697 Gene3D - 42 285 IPR027417 -
Mtr6g1768 697 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 290 IPR003439 GO:0005524
Mtr6g1768 697 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524
Mtr6g1768 697 PANTHER OS04G0528300 PROTEIN 21 692 - -
Mtr6g1768 697 CDD ABCG_EPDR 44 272 - -
Mtr6g1768 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 283 IPR027417 -
Mtr6g1768 697 Pfam ABC-2 type transporter 247 303 IPR043926 GO:0140359
Mtr6g1768 697 Pfam ABC-2 type transporter 380 586 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1768 Mtr-Chr6 32563735 32572671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1768 36 251 Calmodulin-binding Proteins AT2G36910 30.769 2.14e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1768 K05681 - gmx:100816389 1236.09