Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1735 ATGGAAAAAATTTCTCCTCATTCGCTCTCAATGAAGAATGAATCTTCGTCTGTAGCTCCTATTGGTGCTTCTGCTCAATCAAGAACGATTGCCCAAACGATGACCTACATGGAACGCCTTGTTATTGAACTTAGCAATCCTGATCTCAGAGAAAACGCTCTTCGTGTCCTCTCCAAGAGGAATGAATTATCTCAAGAACTTGCACATTTATTATGGAATTCTTTTGGCACTATTGCAATACTTTTACAGGAAATAACTTCAATATATTGTACTCTTTTACCACCGACTCTTACTCTAGCACAATCAACTCGAGTGTGTAACGTTCTTGCACTACTTCAGTATTTGGCATCTCACTCTGAAACAAGGATGTTGTTCCTAAATGCTAGCATGCCTTTGTATTTGTATCCCTTCCTTAAAACAAAAGAAAAGTCACCACAGTTTGAGTATTTAAGGTTTGCAAGTCTTGGAGTCATTGGTGCTTTAGTGAAGGTTAACACCAAAGAAGTCTTGGGTTACCTTATTTTAAGTGAGATAATTCCACTCTGCTTGAGCAACATGGAGATCGGCAATGAAATATCAAAAACTACTGCAACCTTTATATTCCAGAAAATTTTGTTCGATGATGATGGTTTGGCCTACGTTTGTGCTACAGCAGAGCGGTTTTTTGCAGTACGTCGAGTTTTGGACATGATGTCCGAAAGTCTTGACAAGCAACCTACATGTCGTCTTTTGAAGTATATTATTCCTTGCTATGCTCGTTTGTCTAATGATCGCTGGGCTGGCATTGCATTAGCAAACTCTCTTCCTAGTGTGTTTAGAGACACCATTTTTCTTAATCGCGTTCGTGAGGACCCAACAACTTGGGAGTGGGTAAAACACTTGCAGGAGAATGTTAGAAAGAACCAGGAACCTTTAGTAGCAGGTGGAGGAGAAAACAATGATATTGTGGAGTCGTCAACATCGGGACAATGA 972 0.3992 MEKISPHSLSMKNESSSVAPIGASAQSRTIAQTMTYMERLVIELSNPDLRENALRVLSKRNELSQELAHLLWNSFGTIAILLQEITSIYCTLLPPTLTLAQSTRVCNVLALLQYLASHSETRMLFLNASMPLYLYPFLKTKEKSPQFEYLRFASLGVIGALVKVNTKEVLGYLILSEIIPLCLSNMEIGNEISKTTATFIFQKILFDDDGLAYVCATAERFFAVRRVLDMMSESLDKQPTCRLLKYIIPCYARLSNDRWAGIALANSLPSVFRDTIFLNRVREDPTTWEWVKHLQENVRKNQEPLVAGGGENNDIVESSTSGQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1735 323 PANTHER UNCHARACTERIZED 3 299 - -
Mtr6g1735 323 Pfam Cell differentiation family, Rcd1-like 40 298 - -
Mtr6g1735 323 Gene3D - 35 303 IPR011989 -
Mtr6g1735 323 SUPERFAMILY ARM repeat 45 213 IPR016024 -
Mtr6g1735 323 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1735 Mtr-Chr6 31968451 31972581 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Mtr6g1735 Rcd1 1.6e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1735 K12606 - ini:109178184 335.88